Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/33/fb8fd2424b81ad67a471f503b6aad8/BVT_FFPE_TRNA_bld_02_A23WKFTLT4_1.sample_qc.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3c/08fff8b6532935445035fea49e5c35/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3c/08fff8b6532935445035fea49e5c35/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/df/5c4d3c153e28f5ee4c98419903ef39/BVT_FFPE_TRNA_bld_02_A23WKFTLT4_1
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: BVT_FFPE_TRNA_bld_02_A23WKFTLT4_1/abundance.h5
Successfully converted BVT_FFPE_TRNA_bld_02_A23WKFTLT4_1/abundance.h5 to BVT_FFPE_TRNA_bld_02_A23WKFTLT4_1_kallisto_mqc.tsv
  Sample: BVT_FFPE_TRNA_bld_02_A23WKFTLT4_1
  Mean Fragment Length: 122.1 bp
  Median Fragment Length: 115.0 bp
  pct_mito_est_counts: 0.015%
  pct_ribo_est_counts: 1.974%
  pct_hk_est_counts: 0.622%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.026%
  pct_ribo_tpm: 5.142%
  pct_hk_tpm: 0.862%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 6.087%