.command.log - Workdir - NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:VCF_COLLECT (BVT_FFPE_TRNA_bst_02_A23WKFTLT4_2)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/50/2deec1e0adf6d8eaca7670490bd419/.command.log
Size: 1.2 KB
Task: NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:VCF_COLLECT (BVT_FFPE_TRNA_bst_02_A23WKFTLT4_2)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ff/2f34f317156d93b2cb1416b2fce5c6/BVT_FFPE_TRNA_bst_02_A23WKFTLT4_2_fusionreport_index.html
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ff/2f34f317156d93b2cb1416b2fce5c6/BVT_FFPE_TRNA_bst_02_A23WKFTLT4_2.fusions.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0c/1ab77812e8ec325cb121387ca15337/BVT_FFPE_TRNA_bst_02_A23WKFTLT4_2.arriba.fusions.filtered_pass_only.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/50/2deec1e0adf6d8eaca7670490bd419/.command.sh
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/hgnc/hgnc_complete_set.txt
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/hgnc/HGNC-DB-timestamp.txt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/50/2deec1e0adf6d8eaca7670490bd419/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6e/5d990cd0deba82ea26b3db937dc976/BVT_FFPE_TRNA_bst_02_A23WKFTLT4_2.FusionInspector.fusions.abridged.tsv.annotated.coding_effect
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d1/837ee7b0fc7d7c59f582b9017fe751/BVT_FFPE_TRNA_bst_02_A23WKFTLT4_2.tsv
==> STAGING COMPLETE (9 inputs)