-ctat genome lib [/tmp/nxf.UPRkJQ0EKL/ctat_genome_lib_build_dir] validates. CMD: mkdir -p /tmp/nxf.UPRkJQ0EKL/./_starF_checkpoints CMD: mkdir -p /tmp/nxf.UPRkJQ0EKL/./star-fusion.preliminary -sample contains 273616163 rnaseq fragments * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.UPRkJQ0EKL/ctat_genome_lib_build_dir -J /tmp/nxf.UPRkJQ0EKL/BVT_FFPE_TRNA_bst_01_01_A23WKFTLT4_3.Chimeric.out.junction -O /tmp/nxf.UPRkJQ0EKL/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 -parsing fusion evidence: /tmp/nxf.UPRkJQ0EKL/BVT_FFPE_TRNA_bst_01_01_A23WKFTLT4_3.Chimeric.out.junction -building interval tree based on /tmp/nxf.UPRkJQ0EKL/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=37500.00/min [20000], rate=37500.00/min [30000], rate=41860.47/min [40000], rate=37500.00/min [50000], rate=37974.68/min [60000], rate=36000.00/min [70000], rate=35897.44/min [80000], rate=37209.30/min [90000], rate=38297.87/min [100000], rate=37735.85/min [110000], rate=38150.29/min [120000], rate=38918.92/min [130000], rate=39593.91/min [140000], rate=40579.71/min [150000], rate=41474.65/min [160000], rate=42290.75/min [170000], rate=43037.97/min [180000], rate=43724.70/min [190000], rate=44531.25/min [200000], rate=45112.78/min [210000], rate=45818.18/min [220000], rate=46478.87/min [230000], rate=46938.78/min [240000], rate=45569.62/min [250000], rate=44776.12/min [260000], rate=43943.66/min [270000], rate=44628.10/min [280000], rate=45405.41/min [290000], rate=45669.29/min [300000], rate=46511.63/min [310000], rate=47208.12/min [320000], rate=47880.30/min [330000], rate=48529.41/min [340000], rate=49275.36/min [350000], rate=49881.24/min [360000], rate=50704.23/min [370000], rate=51388.89/min [380000], rate=52173.91/min [390000], rate=53061.22/min [400000], rate=53452.12/min [410000], rate=53594.77/min [420000], rate=54310.34/min [430000], rate=54893.62/min [440000], rate=55462.18/min [450000], rate=56133.06/min [460000], rate=57024.79/min [470000], rate=57317.07/min [480000], rate=55598.46/min [490000], rate=54953.27/min [500000], rate=54545.45/min [510000], rate=53968.25/min [520000], rate=52791.88/min [530000], rate=52131.15/min [540000], rate=51757.19/min [550000], rate=51562.50/min [560000], rate=51219.51/min [570000], rate=50968.70/min [580000], rate=50802.92/min [590000], rate=50643.78/min [600000], rate=50000.00/min [610000], rate=49526.39/min [620000], rate=49402.39/min [630000], rate=49347.26/min [640000], rate=48979.59/min [650000], rate=48750.00/min [660000], rate=48588.96/min [670000], rate=48668.28/min [680000], rate=48803.83/min [690000], rate=48648.65/min [700000], rate=48611.11/min [710000], rate=48519.36/min [720000], rate=48539.33/min [730000], rate=48666.67/min [740000], rate=48791.21/min [750000], rate=48913.04/min [760000], rate=49032.26/min [770000], rate=49201.28/min [780000], rate=49211.36/min [790000], rate=49068.32/min [800000], rate=48979.59/min [810000], rate=48697.39/min [820000], rate=48472.91/min [830000], rate=48255.81/min [840000], rate=48091.60/min [850000], rate=47797.56/min [860000], rate=47645.43/min [870000], rate=47714.81/min [880000], rate=47826.09/min [890000], rate=47935.37/min [900000], rate=48000.00/min [910000], rate=48190.64/min [920000], rate=48336.25/min [930000], rate=48521.74/min [940000], rate=48662.64/min [950000], rate=48885.08/min [960000], rate=49063.03/min [970000], rate=49280.27/min [980000], rate=49453.32/min [990000], rate=49624.06/min [1000000], rate=49833.89/min [1010000], rate=50082.64/min [1020000], rate=50287.59/min [1030000], rate=50448.98/min [1040000], rate=50526.32/min [1050000], rate=50561.80/min [1060000], rate=50717.70/min [1070000], rate=50710.90/min [1080000], rate=50823.53/min [1090000], rate=50934.58/min [1100000], rate=50886.66/min [1110000], rate=50878.53/min [1120000], rate=50909.09/min [1130000], rate=50939.14/min [1140000], rate=50968.70/min [1150000], rate=51073.28/min [1160000], rate=51251.84/min [1170000], rate=51504.04/min [1180000], rate=51716.58/min [1190000], rate=51927.27/min [1200000], rate=52173.91/min [1210000], rate=52380.95/min [1220000], rate=52586.21/min [1230000], rate=52751.97/min [1240000], rate=52953.74/min [1250000], rate=53191.49/min [1260000], rate=53389.83/min [1270000], rate=53624.21/min [1280000], rate=53819.20/min [1290000], rate=54012.56/min [1300000], rate=54242.00/min [1310000], rate=54432.13/min [1320000], rate=54620.69/min [1330000], rate=54770.08/min [1340000], rate=54955.57/min [1350000], rate=55139.55/min [1360000], rate=55359.57/min [1370000], rate=55578.09/min [1380000], rate=55795.15/min [1390000], rate=55973.15/min [1400000], rate=56187.29/min [1410000], rate=56400.00/min [1420000], rate=56611.30/min [1430000], rate=56821.19/min [1440000], rate=56917.00/min [1450000], rate=57011.80/min [1460000], rate=57068.40/min [1470000], rate=57161.37/min [1480000], rate=57290.32/min [1490000], rate=57418.11/min [1500000], rate=57544.76/min [1510000], rate=57670.27/min [1520000], rate=57794.68/min [1530000], rate=57954.55/min [1540000], rate=58076.68/min [1550000], rate=58234.19/min [1560000], rate=58172.78/min [1570000], rate=58112.28/min [1580000], rate=58052.66/min [1590000], rate=57993.92/min [1600000], rate=57971.01/min [1610000], rate=58087.79/min [1620000], rate=58238.47/min [1630000], rate=58422.94/min [1640000], rate=58641.24/min [1650000], rate=58788.60/min [1660000], rate=58969.80/min [1670000], rate=59115.04/min [1680000], rate=59294.12/min [1690000], rate=59576.97/min [1700000], rate=59929.49/min [1710000], rate=60175.95/min [1720000], rate=60386.19/min [1730000], rate=60701.75/min [1740000], rate=61016.95/min [1750000], rate=61295.97/min [1760000], rate=61502.62/min [1770000], rate=61672.47/min [1780000], rate=61805.56/min [1790000], rate=61973.46/min [1800000], rate=62211.98/min [1810000], rate=62557.60/min [1820000], rate=62867.01/min [1830000], rate=62994.84/min [1840000], rate=63230.24/min [1850000], rate=63573.88/min [1860000], rate=63844.39/min [1870000], rate=64041.10/min [1880000], rate=64310.15/min [1890000], rate=64652.22/min [1900000], rate=64920.27/min [1910000], rate=65076.66/min [1920000], rate=65417.38/min [1930000], rate=65646.26/min [1940000], rate=65762.71/min [1950000], rate=65730.34/min [1960000], rate=65735.05/min [1970000], rate=65959.82/min [1980000], rate=66257.67/min [1990000], rate=66407.12/min [2000000], rate=66629.65/min [2010000], rate=66777.41/min [2020000], rate=66887.42/min [2030000], rate=66996.70/min [2040000], rate=67142.07/min [2050000], rate=67286.65/min [2060000], rate=67393.68/min [2070000], rate=67536.70/min [2080000], rate=67678.96/min [2090000], rate=67857.14/min [2100000], rate=68034.56/min [2110000], rate=68174.47/min [2120000], rate=68203.75/min [2130000], rate=68269.23/min [2140000], rate=68334.22/min [2150000], rate=68362.48/min [2160000], rate=68426.61/min [2170000], rate=68454.26/min [2180000], rate=68553.46/min [2190000], rate=68580.38/min [2200000], rate=68678.46/min [2210000], rate=68775.93/min [2220000], rate=68837.21/min [2230000], rate=68933.54/min [2240000], rate=69064.75/min [2250000], rate=69159.84/min [2260000], rate=69254.34/min [2270000], rate=69383.60/min [2280000], rate=69476.89/min [2290000], rate=69569.62/min [2300000], rate=69696.97/min [2310000], rate=69823.68/min [2320000], rate=69949.75/min [2330000], rate=70040.08/min [2340000], rate=70164.92/min [2350000], rate=70289.13/min [2360000], rate=70029.67/min [2370000], rate=69399.71/min [2380000], rate=69085.63/min [2390000], rate=68514.09/min [2400000], rate=67892.50/min [2410000], rate=67570.09/min [2420000], rate=67409.47/min [2430000], rate=67188.94/min [2440000], rate=67094.41/min [2450000], rate=66909.42/min [2460000], rate=66757.12/min [2470000], rate=66546.92/min [2480000], rate=66339.72/min [2490000], rate=66164.75/min [2500000], rate=66050.20/min [2510000], rate=65908.10/min [2520000], rate=65739.13/min [2530000], rate=65657.44/min [2540000], rate=65435.81/min [2550000], rate=65356.69/min [2560000], rate=65250.64/min [2570000], rate=65200.85/min [2580000], rate=65178.95/min [2590000], rate=65157.23/min [2600000], rate=65135.70/min [2610000], rate=65087.28/min [2620000], rate=65066.23/min [2630000], rate=64991.76/min [2640000], rate=64918.03/min [2650000], rate=64924.46/min [2660000], rate=64930.84/min [2670000], rate=64937.17/min [2680000], rate=64969.70/min [2690000], rate=65002.01/min [2700000], rate=65034.12/min [2710000], rate=65092.07/min [2720000], rate=65149.70/min [2730000], rate=65207.01/min [2740000], rate=65289.91/min [2750000], rate=65346.53/min [2760000], rate=65351.22/min [2770000], rate=65407.32/min [2780000], rate=65488.81/min [2790000], rate=65569.92/min [2800000], rate=65650.64/min [2810000], rate=65730.99/min [2820000], rate=65836.58/min [2830000], rate=65993.00/min [2840000], rate=66097.75/min [2850000], rate=66099.73/min [2860000], rate=66000.00/min [2870000], rate=65850.86/min [2880000], rate=65778.45/min [2890000], rate=65706.71/min [2900000], rate=65660.38/min [2910000], rate=65614.43/min [2920000], rate=65593.41/min [2930000], rate=65523.67/min [2940000], rate=65503.16/min [2950000], rate=65482.80/min -building interval tree based on /tmp/nxf.UPRkJQ0EKL/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=46153.85/min [20000], rate=54545.45/min [30000], rate=60000.00/min [40000], rate=63157.89/min [50000], rate=62500.00/min [60000], rate=61016.95/min [70000], rate=59154.93/min [80000], rate=59259.26/min [90000], rate=58695.65/min [100000], rate=58252.43/min [110000], rate=58928.57/min [120000], rate=58064.52/min [130000], rate=58646.62/min [140000], rate=60431.65/min [150000], rate=62500.00/min [160000], rate=64000.00/min [170000], rate=65806.45/min [180000], rate=67500.00/min [190000], rate=67857.14/min [200000], rate=66298.34/min [210000], rate=63636.36/min [220000], rate=61682.24/min [230000], rate=60792.95/min [240000], rate=60759.49/min [250000], rate=60483.87/min [260000], rate=60231.66/min [270000], rate=59778.60/min [280000], rate=59574.47/min [290000], rate=58389.26/min [300000], rate=58064.52/min [310000], rate=57763.98/min [320000], rate=57313.43/min [330000], rate=55153.20/min [340000], rate=54400.00/min [350000], rate=54404.15/min [360000], rate=54271.36/min [370000], rate=54411.76/min [380000], rate=54676.26/min [390000], rate=54800.94/min [400000], rate=55299.54/min [410000], rate=55405.41/min [420000], rate=55629.14/min [430000], rate=55483.87/min [440000], rate=55462.18/min [450000], rate=55327.87/min [460000], rate=55533.20/min [470000], rate=56063.62/min [480000], rate=56360.08/min [490000], rate=56756.76/min [500000], rate=57142.86/min [510000], rate=57410.88/min [520000], rate=57777.78/min [530000], rate=58135.28/min [540000], rate=58802.18/min [550000], rate=59245.96/min [560000], rate=59680.28/min [570000], rate=60000.00/min [580000], rate=60416.67/min [590000], rate=60824.74/min [600000], rate=61120.54/min [610000], rate=61512.61/min [620000], rate=61896.84/min [630000], rate=62171.05/min [640000], rate=62540.72/min [650000], rate=62903.23/min [660000], rate=63258.79/min [670000], rate=63708.40/min [680000], rate=63949.84/min [690000], rate=64285.71/min [700000], rate=64714.95/min [710000], rate=65137.61/min [720000], rate=65355.52/min [730000], rate=65765.77/min [740000], rate=65583.46/min [750000], rate=65217.39/min [760000], rate=64225.35/min [770000], rate=63548.83/min [780000], rate=63157.89/min [790000], rate=63031.91/min [800000], rate=62909.57/min [810000], rate=62548.26/min [820000], rate=62515.88/min [830000], rate=62406.02/min [840000], rate=61689.11/min [850000], rate=61519.90/min [860000], rate=61501.79/min [870000], rate=61556.60/min [880000], rate=61466.82/min [890000], rate=61238.53/min [900000], rate=61155.15/min [910000], rate=60801.78/min [920000], rate=59869.85/min [930000], rate=59679.14/min [940000], rate=59305.99/min [950000], rate=59375.00/min [960000], rate=59320.29/min [970000], rate=59206.51/min [980000], rate=59036.14/min [990000], rate=59045.73/min [1000000], rate=58939.10/min [1010000], rate=58607.35/min [1020000], rate=58064.52/min [1030000], rate=57757.01/min [1040000], rate=57511.52/min [1050000], rate=57220.71/min [1060000], rate=57040.36/min [1070000], rate=56914.89/min [1080000], rate=56643.36/min [1090000], rate=56427.96/min [1100000], rate=56313.99/min [1110000], rate=56250.00/min [1120000], rate=56234.31/min [1130000], rate=56218.91/min [1140000], rate=56389.12/min [1150000], rate=56603.77/min [1160000], rate=56816.33/min [1170000], rate=57026.81/min [1180000], rate=57235.25/min [1190000], rate=57487.92/min [1200000], rate=57553.96/min [1210000], rate=57573.35/min [1220000], rate=57592.45/min [1230000], rate=57656.25/min [1240000], rate=57629.74/min [1250000], rate=56646.53/min [1260000], rate=55629.14/min [1270000], rate=55418.18/min [1280000], rate=55251.80/min [1290000], rate=54854.71/min [1300000], rate=54545.45/min [1310000], rate=53946.47/min [1320000], rate=53477.38/min [1330000], rate=53129.16/min [1340000], rate=52894.74/min [1350000], rate=52631.58/min [1360000], rate=52408.48/min [1370000], rate=52124.29/min [1380000], rate=51977.40/min [1390000], rate=51640.87/min [1400000], rate=51313.38/min [1410000], rate=51117.82/min [1420000], rate=50926.48/min [1430000], rate=50769.23/min [1440000], rate=50704.23/min [1450000], rate=50581.40/min [1460000], rate=50519.03/min [1470000], rate=50544.41/min [1480000], rate=50684.93/min [1490000], rate=50824.33/min [1500000], rate=50876.20/min [1510000], rate=50984.81/min [1520000], rate=51063.83/min [1530000], rate=51170.57/min [1540000], rate=51247.92/min [1550000], rate=51239.67/min [1560000], rate=51203.50/min [1570000], rate=51251.36/min [1580000], rate=51326.48/min [1590000], rate=51400.86/min [1600000], rate=51502.15/min [1610000], rate=51602.56/min [1620000], rate=51729.64/min [1630000], rate=51828.30/min [1640000], rate=51926.12/min [1650000], rate=52077.85/min [1660000], rate=52256.03/min [1670000], rate=52405.86/min [1680000], rate=52582.16/min [1690000], rate=52702.70/min [1700000], rate=52822.37/min [1710000], rate=52941.18/min [1720000], rate=53059.13/min [1730000], rate=53176.23/min [1740000], rate=53319.71/min [1750000], rate=53462.32/min [1760000], rate=53604.06/min [1770000], rate=53799.39/min [1780000], rate=54021.24/min [1790000], rate=54215.04/min [1800000], rate=54380.66/min [1810000], rate=54518.07/min [1820000], rate=54682.02/min [1830000], rate=54763.09/min [1840000], rate=54761.90/min [1850000], rate=54760.73/min [1860000], rate=54759.57/min [1870000], rate=54758.42/min [1880000], rate=54519.09/min [1890000], rate=54545.45/min [1900000], rate=54571.57/min [1910000], rate=54597.43/min [1920000], rate=54648.96/min [1930000], rate=54700.05/min [1940000], rate=54776.47/min [1950000], rate=54826.62/min [1960000], rate=54901.96/min [1970000], rate=54976.74/min [1980000], rate=55076.50/min [1990000], rate=55175.60/min [2000000], rate=55274.07/min [2010000], rate=55371.90/min [2020000], rate=55443.73/min [2030000], rate=55565.69/min [2040000], rate=55661.66/min [2050000], rate=55782.31/min [2060000], rate=55902.31/min [2070000], rate=56021.65/min [2080000], rate=56140.35/min [2090000], rate=56258.41/min [2100000], rate=56401.07/min [2110000], rate=56517.86/min [2120000], rate=56659.24/min [2130000], rate=56825.26/min [2140000], rate=57041.31/min [2150000], rate=57231.59/min [2160000], rate=57421.36/min [2170000], rate=57636.12/min [2180000], rate=57824.93/min [2190000], rate=58013.25/min [2200000], rate=58201.06/min [2210000], rate=58388.38/min [2220000], rate=58575.20/min [2230000], rate=58761.53/min [2240000], rate=58921.53/min [2250000], rate=59055.12/min [2260000], rate=59188.13/min [2270000], rate=59320.56/min [2280000], rate=59246.43/min [2290000], rate=58919.38/min [2300000], rate=58623.62/min [2310000], rate=58357.89/min [2320000], rate=58096.83/min [2330000], rate=57816.38/min [2340000], rate=57564.58/min [2350000], rate=57527.54/min [2360000], rate=57514.22/min [2370000], rate=57477.77/min [2380000], rate=57418.58/min [2390000], rate=57382.95/min [2400000], rate=57324.84/min [2410000], rate=57312.72/min [2420000], rate=57391.30/min [2430000], rate=57469.45/min [2440000], rate=57547.17/min [2450000], rate=57624.46/min [2460000], rate=57701.33/min [2470000], rate=57800.31/min [2480000], rate=57898.83/min [2490000], rate=57996.89/min [2500000], rate=58094.50/min [2510000], rate=58191.65/min [2520000], rate=58265.90/min [2530000], rate=58339.74/min [2540000], rate=58458.00/min [2550000], rate=58665.64/min [2560000], rate=58805.51/min [2570000], rate=58922.43/min [2580000], rate=59038.90/min [2590000], rate=59132.42/min [2600000], rate=59248.01/min [2610000], rate=59363.15/min [2620000], rate=59477.87/min [2630000], rate=59592.15/min [2640000], rate=59616.11/min [2650000], rate=59639.91/min [2660000], rate=59663.55/min [2670000], rate=59664.80/min [2680000], rate=59688.20/min [2690000], rate=59755.65/min [2700000], rate=59822.75/min [2710000], rate=59845.42/min [2720000], rate=59867.94/min [2730000], rate=59912.22/min [2740000], rate=59956.24/min [2750000], rate=60021.83/min [2760000], rate=60087.08/min [2770000], rate=60173.79/min [2780000], rate=60238.35/min [2790000], rate=60280.88/min [2800000], rate=60388.21/min [2810000], rate=60473.46/min [2820000], rate=60558.34/min [2830000], rate=60642.86/min [2840000], rate=60748.66/min [2850000], rate=60832.44/min [2860000], rate=60937.50/min [2870000], rate=61042.18/min [2880000], rate=61146.50/min [2890000], rate=61272.08/min [2900000], rate=61418.99/min [2910000], rate=61522.20/min [2920000], rate=61646.73/min [2930000], rate=61749.21/min [2940000], rate=61873.03/min [2950000], rate=61974.79/min -building interval tree based on /tmp/nxf.UPRkJQ0EKL/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=100000.00/min [20000], rate=85714.29/min [30000], rate=85714.29/min [40000], rate=85714.29/min [50000], rate=85714.29/min [60000], rate=85714.29/min [70000], rate=85714.29/min [80000], rate=84210.53/min [90000], rate=83076.92/min [100000], rate=83333.33/min [110000], rate=83544.30/min [120000], rate=82758.62/min [130000], rate=82105.26/min [140000], rate=83168.32/min [150000], rate=82568.81/min [160000], rate=78688.52/min [170000], rate=75555.56/min [180000], rate=72972.97/min [190000], rate=66279.07/min [200000], rate=59701.49/min [210000], rate=55752.21/min [220000], rate=53441.30/min [230000], rate=51301.12/min [240000], rate=49826.99/min [250000], rate=49668.87/min [260000], rate=48447.20/min [270000], rate=48795.18/min [280000], rate=48414.99/min [290000], rate=49014.08/min [300000], rate=49180.33/min [310000], rate=49336.87/min [320000], rate=50000.00/min [330000], rate=50510.20/min [340000], rate=51127.82/min [350000], rate=51851.85/min [360000], rate=52554.74/min [370000], rate=53110.05/min [380000], rate=53521.13/min [390000], rate=53669.72/min [400000], rate=54298.64/min [410000], rate=54910.71/min [420000], rate=55506.61/min [430000], rate=56331.88/min [440000], rate=56774.19/min [450000], rate=57446.81/min [460000], rate=58350.95/min [470000], rate=58385.09/min [480000], rate=56804.73/min [490000], rate=55159.47/min [500000], rate=53859.96/min [510000], rate=52667.81/min [520000], rate=52173.91/min [530000], rate=52131.15/min [540000], rate=52258.06/min [550000], rate=52464.23/min [560000], rate=52336.45/min [570000], rate=52054.79/min [580000], rate=51862.89/min [590000], rate=51754.39/min [600000], rate=51724.14/min [610000], rate=51476.79/min [620000], rate=51523.55/min [630000], rate=51639.34/min [640000], rate=51962.11/min [650000], rate=52208.84/min [660000], rate=52311.76/min [670000], rate=52411.99/min [680000], rate=52374.84/min [690000], rate=52405.06/min [700000], rate=52434.46/min [710000], rate=52657.60/min [720000], rate=53071.25/min [730000], rate=52962.52/min [740000], rate=52794.29/min [750000], rate=52570.09/min [760000], rate=52293.58/min [770000], rate=52085.68/min [780000], rate=51884.70/min [790000], rate=51916.76/min [800000], rate=51948.05/min [810000], rate=52034.26/min [820000], rate=52229.30/min [830000], rate=52092.05/min [840000], rate=52012.38/min [850000], rate=51881.99/min [860000], rate=51859.30/min [870000], rate=51785.71/min [880000], rate=51764.71/min [890000], rate=51744.19/min [900000], rate=51823.42/min [910000], rate=51753.55/min [920000], rate=51782.36/min [930000], rate=51906.98/min [940000], rate=51933.70/min [950000], rate=51912.57/min [960000], rate=51798.56/min [970000], rate=51687.39/min [980000], rate=51533.74/min [990000], rate=51251.08/min [1000000], rate=50847.46/min [1010000], rate=50542.12/min [1020000], rate=50205.09/min [1030000], rate=50203.09/min [1040000], rate=50040.10/min [1050000], rate=50000.00/min [1060000], rate=50157.73/min [1070000], rate=50234.74/min [1080000], rate=50349.65/min [1090000], rate=50462.96/min [1100000], rate=50574.71/min [1110000], rate=50646.39/min [1120000], rate=50716.98/min [1130000], rate=50824.59/min [1140000], rate=50930.75/min [1150000], rate=50960.12/min [1160000], rate=50989.01/min [1170000], rate=51017.44/min [1180000], rate=51082.25/min [1190000], rate=51219.51/min [1200000], rate=51318.60/min [1210000], rate=50983.15/min [1220000], rate=50798.06/min [1230000], rate=50478.80/min [1240000], rate=50134.77/min [1250000], rate=49900.20/min [1260000], rate=49933.95/min [1270000], rate=50032.83/min [1280000], rate=50130.55/min [1290000], rate=50194.55/min [1300000], rate=50290.14/min [1310000], rate=50416.93/min [1320000], rate=50542.44/min [1330000], rate=50698.86/min [1340000], rate=50821.74/min [1350000], rate=50943.40/min [1360000], rate=51000.00/min [1370000], rate=51087.63/min [1380000], rate=51237.62/min [1390000], rate=51197.05/min [1400000], rate=50847.46/min [1410000], rate=50628.37/min [1420000], rate=50714.29/min [1430000], rate=50829.38/min [1440000], rate=50913.38/min [1450000], rate=51056.34/min [1460000], rate=51198.13/min [1470000], rate=51308.90/min [1480000], rate=51418.65/min [1490000], rate=51557.09/min [1500000], rate=51724.14/min [1510000], rate=51890.03/min [1520000], rate=52084.52/min [1530000], rate=52248.15/min [1540000], rate=52410.66/min [1550000], rate=52601.81/min [1560000], rate=52791.88/min [1570000], rate=52951.10/min [1580000], rate=53139.01/min [1590000], rate=52941.18/min [1600000], rate=52747.25/min [1610000], rate=52557.13/min [1620000], rate=52398.92/min [1630000], rate=52243.59/min [1640000], rate=52173.91/min [1650000], rate=52050.47/min [1660000], rate=51956.18/min [1670000], rate=51410.98/min [1680000], rate=50883.39/min [1690000], rate=50548.35/min [1700000], rate=50520.06/min [1710000], rate=50541.87/min [1720000], rate=50489.24/min [1730000], rate=50437.32/min [1740000], rate=50410.43/min [1750000], rate=50383.88/min [1760000], rate=50357.65/min [1770000], rate=50403.42/min [1780000], rate=50401.13/min [1790000], rate=50446.22/min [1800000], rate=50467.29/min [1810000], rate=50417.83/min [1820000], rate=50438.80/min [1830000], rate=50436.38/min [1840000], rate=50410.96/min [1850000], rate=50431.62/min [1860000], rate=50497.74/min [1870000], rate=50472.33/min [1880000], rate=50492.39/min [1890000], rate=50489.76/min [1900000], rate=50509.53/min [1910000], rate=50529.10/min [1920000], rate=50592.89/min [1930000], rate=50567.69/min [1940000], rate=50608.70/min [1950000], rate=50715.21/min [1960000], rate=50821.09/min [1970000], rate=50860.59/min [1980000], rate=50943.40/min [1990000], rate=51047.46/min [2000000], rate=51150.90/min [2010000], rate=51231.95/min [2020000], rate=51334.18/min [2030000], rate=51414.10/min [2040000], rate=51493.48/min [2050000], rate=51550.71/min [2060000], rate=51607.52/min [2070000], rate=51685.39/min [2080000], rate=51805.73/min [2090000], rate=51903.97/min [2100000], rate=51980.20/min [2110000], rate=52055.92/min [2120000], rate=52152.52/min [2130000], rate=52291.33/min [2140000], rate=52408.16/min [2150000], rate=52503.05/min [2160000], rate=52533.44/min [2170000], rate=52627.32/min [2180000], rate=52720.68/min [2190000], rate=52813.50/min [2200000], rate=52842.27/min [2210000], rate=52913.01/min [2220000], rate=52983.29/min [2230000], rate=53032.10/min [2240000], rate=53080.57/min [2250000], rate=53128.69/min [2260000], rate=53197.33/min [2270000], rate=53244.72/min [2280000], rate=53291.78/min [2290000], rate=53359.22/min [2300000], rate=53405.57/min [2310000], rate=53472.22/min [2320000], rate=53517.88/min [2330000], rate=53604.29/min [2340000], rate=53690.25/min [2350000], rate=53755.24/min [2360000], rate=53819.84/min [2370000], rate=53884.05/min [2380000], rate=53947.87/min [2390000], rate=54011.30/min [2400000], rate=54033.77/min [2410000], rate=54056.07/min [2420000], rate=54078.21/min [2430000], rate=54100.19/min [2440000], rate=54122.00/min [2450000], rate=54143.65/min [2460000], rate=54165.14/min [2470000], rate=54186.47/min [2480000], rate=54266.96/min [2490000], rate=54287.79/min [2500000], rate=54328.14/min [2510000], rate=54387.87/min [2520000], rate=54466.86/min [2530000], rate=54545.45/min [2540000], rate=54623.66/min [2550000], rate=54701.47/min [2560000], rate=54778.89/min [2570000], rate=54836.42/min [2580000], rate=54952.08/min [2590000], rate=55047.82/min [2600000], rate=55143.16/min [2610000], rate=55218.62/min [2620000], rate=55313.16/min [2630000], rate=55407.30/min [2640000], rate=55501.05/min [2650000], rate=55613.85/min [2660000], rate=55726.26/min [2670000], rate=55838.27/min [2680000], rate=55930.43/min [2690000], rate=56041.67/min [2700000], rate=56133.06/min [2710000], rate=56243.51/min [2720000], rate=56353.59/min [2730000], rate=56443.83/min [2740000], rate=56533.70/min [2750000], rate=56623.20/min [2760000], rate=56751.20/min [2770000], rate=56937.31/min [2780000], rate=57025.64/min [2790000], rate=57113.61/min [2800000], rate=57201.23/min [2810000], rate=57288.48/min [2820000], rate=57394.84/min [2830000], rate=57500.85/min [2840000], rate=57606.49/min [2850000], rate=57731.26/min [2860000], rate=57719.48/min [2870000], rate=57649.82/min [2880000], rate=57580.81/min [2890000], rate=57531.52/min [2900000], rate=57463.67/min [2910000], rate=57434.21/min [2920000], rate=57386.18/min [2930000], rate=57338.55/min [2940000], rate=57291.33/min -building interval tree based on /tmp/nxf.UPRkJQ0EKL/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=120000.00/min [20000], rate=120000.00/min [30000], rate=128571.43/min [40000], rate=126315.79/min [50000], rate=157894.74/min [60000], rate=163636.36/min [70000], rate=175000.00/min [80000], rate=200000.00/min [90000], rate=186206.90/min [100000], rate=176470.59/min [110000], rate=173684.21/min [120000], rate=167441.86/min [130000], rate=181395.35/min [140000], rate=182608.70/min [150000], rate=187500.00/min [160000], rate=195918.37/min [170000], rate=182142.86/min [180000], rate=171428.57/min [190000], rate=165217.39/min [200000], rate=160000.00/min [210000], rate=151807.23/min [220000], rate=150000.00/min [230000], rate=151648.35/min [240000], rate=150000.00/min [250000], rate=148514.85/min [260000], rate=147169.81/min [270000], rate=144642.86/min [280000], rate=143589.74/min [290000], rate=141463.41/min [300000], rate=144000.00/min [310000], rate=143076.92/min [320000], rate=143283.58/min [330000], rate=117857.14/min [340000], rate=96226.42/min [350000], rate=72413.79/min [360000], rate=65060.24/min [370000], rate=61838.44/min [380000], rate=58762.89/min [390000], rate=56250.00/min [400000], rate=54176.07/min [410000], rate=51356.99/min [420000], rate=49900.99/min [430000], rate=48679.25/min [440000], rate=47311.83/min [450000], rate=45378.15/min [460000], rate=43192.49/min [470000], rate=42533.94/min [480000], rate=42105.26/min [490000], rate=41061.45/min [500000], rate=40160.64/min [510000], rate=39534.88/min [520000], rate=39146.80/min [530000], rate=38780.49/min [540000], rate=38252.66/min [550000], rate=37931.03/min [560000], rate=36761.49/min [570000], rate=36499.47/min [580000], rate=35765.67/min [590000], rate=35294.12/min [600000], rate=35363.46/min [610000], rate=35158.50/min [620000], rate=34508.35/min [630000], rate=33962.26/min [640000], rate=33507.85/min [650000], rate=33050.85/min [660000], rate=32459.02/min [670000], rate=32006.37/min [680000], rate=31554.52/min [690000], rate=31245.28/min [700000], rate=30859.66/min [710000], rate=30625.45/min [720000], rate=30769.23/min [730000], rate=30932.20/min [740000], rate=31092.44/min [750000], rate=31271.72/min [760000], rate=31426.60/min [770000], rate=31600.55/min [780000], rate=31664.41/min [790000], rate=31769.44/min [800000], rate=31851.36/min [810000], rate=32036.91/min [820000], rate=32198.95/min [830000], rate=32316.68/min [840000], rate=32453.32/min [850000], rate=32567.05/min [860000], rate=32741.12/min [870000], rate=32871.54/min [880000], rate=32835.82/min [890000], rate=32700.55/min [900000], rate=32549.73/min [910000], rate=32694.61/min [920000], rate=32837.60/min [930000], rate=32959.24/min [940000], rate=33059.79/min [950000], rate=33216.78/min [960000], rate=33314.05/min [970000], rate=33448.28/min [980000], rate=33580.81/min [990000], rate=33730.83/min [1000000], rate=33840.95/min [1010000], rate=33968.61/min [1020000], rate=34113.71/min [1030000], rate=34219.27/min [1040000], rate=34248.08/min [1050000], rate=34388.65/min [1060000], rate=34490.24/min [1070000], rate=34609.16/min [1080000], rate=34708.09/min [1090000], rate=34824.28/min [1100000], rate=34957.63/min [1110000], rate=35126.58/min [1120000], rate=35257.08/min [1130000], rate=35404.70/min [1140000], rate=35550.94/min [1150000], rate=35695.81/min [1160000], rate=35839.34/min [1170000], rate=36000.00/min [1180000], rate=36159.35/min [1190000], rate=36317.40/min [1200000], rate=36474.16/min [1210000], rate=36648.16/min [1220000], rate=36820.93/min [1230000], rate=36973.95/min [1240000], rate=37125.75/min [1250000], rate=37313.43/min [1260000], rate=37500.00/min [1270000], rate=37592.50/min [1280000], rate=37758.11/min [1290000], rate=37941.18/min [1300000], rate=38085.94/min [1310000], rate=38210.99/min [1320000], rate=38334.95/min [1330000], rate=38532.11/min [1340000], rate=38709.68/min [1350000], rate=38904.90/min [1360000], rate=39080.46/min [1370000], rate=39273.77/min [1380000], rate=39447.36/min [1390000], rate=39638.78/min [1400000], rate=39829.30/min [1410000], rate=40000.00/min [1420000], rate=40037.59/min [1430000], rate=40112.20/min [1440000], rate=40167.36/min [1450000], rate=40240.52/min [1460000], rate=40275.86/min [1470000], rate=40329.22/min [1480000], rate=40400.36/min [1490000], rate=40415.91/min [1500000], rate=40485.83/min [1510000], rate=40573.22/min [1520000], rate=40696.12/min [1530000], rate=40836.30/min [1540000], rate=40975.61/min [1550000], rate=41095.89/min [1560000], rate=41233.48/min [1570000], rate=41352.06/min [1580000], rate=41469.82/min [1590000], rate=41604.88/min [1600000], rate=41720.99/min [1610000], rate=41854.42/min [1620000], rate=42005.19/min [1630000], rate=42173.35/min [1640000], rate=42304.39/min [1650000], rate=42434.63/min [1660000], rate=42582.30/min [1670000], rate=42729.21/min [1680000], rate=42857.14/min [1690000], rate=43020.79/min [1700000], rate=43165.47/min [1710000], rate=43309.41/min [1720000], rate=43489.25/min [1730000], rate=43631.78/min [1740000], rate=43791.95/min [1750000], rate=43951.44/min [1760000], rate=43872.04/min [1770000], rate=43775.76/min [1780000], rate=43680.98/min [1790000], rate=43552.31/min [1800000], rate=43495.77/min [1810000], rate=43387.93/min [1820000], rate=43350.54/min [1830000], rate=43228.35/min [1840000], rate=43209.39/min [1850000], rate=43173.86/min [1860000], rate=43155.45/min [1870000], rate=43170.45/min [1880000], rate=43168.77/min [1890000], rate=43183.55/min [1900000], rate=43165.47/min [1910000], rate=43180.11/min [1920000], rate=43227.02/min [1930000], rate=43257.38/min [1940000], rate=43303.57/min [1950000], rate=43365.46/min [1960000], rate=43426.88/min [1970000], rate=43471.86/min [1980000], rate=43564.36/min [1990000], rate=43640.35/min [2000000], rate=43731.78/min [2010000], rate=43806.76/min [2020000], rate=43897.14/min [2030000], rate=43987.00/min [2040000], rate=44044.62/min [2050000], rate=44086.02/min [2060000], rate=44127.10/min [2070000], rate=44199.29/min [2080000], rate=44255.32/min [2090000], rate=44310.95/min [2100000], rate=44381.82/min [2110000], rate=44436.64/min [2120000], rate=44506.65/min [2130000], rate=44591.77/min [2140000], rate=44676.41/min [2150000], rate=44760.58/min [2160000], rate=44844.29/min [2170000], rate=44927.54/min [2180000], rate=45010.32/min [2190000], rate=45108.14/min [2200000], rate=45205.48/min [2210000], rate=45317.84/min [2220000], rate=45414.25/min [2230000], rate=45510.20/min [2240000], rate=45621.18/min [2250000], rate=45731.71/min [2260000], rate=45841.78/min [2270000], rate=45951.42/min [2280000], rate=46076.12/min [2290000], rate=46200.40/min [2300000], rate=46339.83/min [2310000], rate=46463.29/min [2320000], rate=46586.35/min [2330000], rate=46724.60/min [2340000], rate=46768.82/min [2350000], rate=46750.66/min [2360000], rate=46748.10/min [2370000], rate=46730.20/min [2380000], rate=46712.46/min [2390000], rate=46679.69/min [2400000], rate=46692.61/min [2410000], rate=46735.62/min [2420000], rate=46763.29/min [2430000], rate=46790.76/min [2440000], rate=46818.04/min [2450000], rate=46860.06/min [2460000], rate=46886.91/min [2470000], rate=46913.58/min [2480000], rate=46969.70/min [2490000], rate=47010.70/min [2500000], rate=47066.21/min [2510000], rate=47136.15/min [2520000], rate=47191.01/min [2530000], rate=47216.17/min [2540000], rate=47211.90/min [2550000], rate=47251.39/min [2560000], rate=47305.20/min [2570000], rate=47373.27/min [2580000], rate=47441.01/min [2590000], rate=47522.94/min [2600000], rate=47575.48/min [2610000], rate=47627.74/min [2620000], rate=47708.65/min [2630000], rate=47774.75/min [2640000], rate=47840.53/min [2650000], rate=47906.00/min [2660000], rate=47956.73/min [2670000], rate=48021.58/min [2680000], rate=48071.75/min [2690000], rate=48136.00/min [2700000], rate=48214.29/min [2710000], rate=48277.91/min [2720000], rate=48341.23/min [2730000], rate=48418.56/min [2740000], rate=48495.58/min [2750000], rate=48586.57/min [2760000], rate=48662.94/min [2770000], rate=48753.30/min [2780000], rate=48843.34/min [2790000], rate=48947.37/min [2800000], rate=49036.78/min [2810000], rate=49140.19/min [2820000], rate=49243.31/min [2830000], rate=49346.12/min [2840000], rate=49448.64/min [2850000], rate=49565.22/min [2860000], rate=49667.15/min [2870000], rate=49783.17/min [2880000], rate=49884.53/min [2890000], rate=50000.00/min [2900000], rate=50100.78/min [2910000], rate=50215.70/min [2920000], rate=50344.83/min [2930000], rate=50473.73/min [2940000], rate=50587.90/min [2950000], rate=50716.33/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.UPRkJQ0EKL/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.UPRkJQ0EKL/ctat_genome_lib_build_dir --filt_file /tmp/nxf.UPRkJQ0EKL/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.UPRkJQ0EKL/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -parsing /tmp/nxf.UPRkJQ0EKL/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info. 0.00 reads per min processed... 0.00 reads per min processed... 18000000.00 reads per min processed... 12000000.00 reads per min processed... 7500000.00 reads per min processed... 7200000.00 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 5400000.00 reads per min processed... 5454545.45 reads per min processed... 5500000.00 reads per min processed... 5538461.54 reads per min processed... 5200000.00 reads per min processed... 5250000.00 reads per min processed... 5294117.65 reads per min processed... 5333333.33 reads per min processed... 5100000.00 reads per min processed... 5142857.14 reads per min processed... 5181818.18 reads per min processed... 5217391.30 reads per min processed... 5040000.00 reads per min processed... 5076923.08 reads per min processed... 5111111.11 reads per min processed... 4965517.24 reads per min processed... 5000000.00 reads per min processed... 5032258.06 reads per min processed... 5062500.00 reads per min processed... 5090909.09 reads per min processed... 4971428.57 reads per min processed... 5000000.00 reads per min processed... 5027027.03 reads per min processed... 4923076.92 reads per min processed... 4829268.29 reads per min processed... 4857142.86 reads per min processed... 4772727.27 reads per min processed... 4695652.17 reads per min processed... 4723404.26 reads per min processed... 4750000.00 reads per min processed... 4680000.00 reads per min processed... 4705882.35 reads per min processed... 4641509.43 reads per min processed... 4666666.67 reads per min processed... 4690909.09 reads per min processed... 4714285.71 reads per min processed... 4655172.41 reads per min processed... 4677966.10 reads per min processed... 4700000.00 reads per min processed... 4721311.48 reads per min processed... 4741935.48 reads per min processed... 4687500.00 reads per min processed... 4707692.31 reads per min processed... 4727272.73 reads per min processed... 4676470.59 reads per min processed... 4695652.17 reads per min processed... 4714285.71 reads per min processed... 4666666.67 reads per min processed... 4684931.51 reads per min processed... 4702702.70 reads per min processed... 4720000.00 reads per min processed... 4736842.11 reads per min processed... 4753246.75 reads per min processed... 4708860.76 reads per min processed... 4725000.00 reads per min processed... 4800000.00 reads per min processed... 4814814.81 reads per min processed... 4829268.29 reads per min processed... 4843373.49 reads per min processed... 4857142.86 reads per min processed... 4870588.24 reads per min processed... 4883720.93 reads per min processed... 4840909.09 reads per min processed... 4853932.58 reads per min processed... 4866666.67 reads per min processed... 4879120.88 reads per min processed... 4891304.35 reads per min processed... 4903225.81 reads per min processed... 4914893.62 reads per min processed... 4875000.00 reads per min processed... 4886597.94 reads per min processed... 4897959.18 reads per min processed... 4909090.91 reads per min processed... 4871287.13 reads per min processed... 4882352.94 reads per min processed... 4893203.88 reads per min processed... 4857142.86 reads per min processed... 4867924.53 reads per min processed... 4878504.67 reads per min processed... 4888888.89 reads per min processed... 4854545.45 reads per min processed... 4864864.86 reads per min processed... 4875000.00 reads per min processed... 4884955.75 reads per min processed... 4852173.91 reads per min processed... 4862068.97 reads per min processed... 4871794.87 reads per min processed... 4881355.93 reads per min processed... 4850000.00 reads per min processed... 4859504.13 reads per min processed... 4868852.46 reads per min processed... done. * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.UPRkJQ0EKL/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.UPRkJQ0EKL/./star-fusion.preliminary/star-fusion -parsing fusion evidence: /tmp/nxf.UPRkJQ0EKL/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -outputting fusion candidates to file: /tmp/nxf.UPRkJQ0EKL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.UPRkJQ0EKL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.UPRkJQ0EKL/BVT_FFPE_TRNA_bst_01_01_A23WKFTLT4_3.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.UPRkJQ0EKL/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.UPRkJQ0EKL/./star-fusion.preliminary/star-fusion CMD: mkdir -p /tmp/nxf.UPRkJQ0EKL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir EM: Starting log likelihood: -332002.029839 EM: Round [1] log likelihood: -331875.888275 EM: Round [2] log likelihood: -331825.718197 EM: Round [3] log likelihood: -331801.175479 EM: Round [4] log likelihood: -331788.055580 EM: Round [5] log likelihood: -331780.666341 EM: Round [6] log likelihood: -331776.314862 EM: Round [7] log likelihood: -331773.636433 EM: Round [8] log likelihood: -331771.914608 EM: Round [9] log likelihood: -331770.761756 EM: Round [10] log likelihood: -331769.961225 EM: Round [11] log likelihood: -331769.387587 EM: Round [12] log likelihood: -331768.965512 EM: Round [13] log likelihood: -331768.648062 EM: Round [14] log likelihood: -331768.404925 EM: Round [15] log likelihood: -331768.215867 EM: Round [16] log likelihood: -331768.066966 EM: Round [17] log likelihood: -331767.948390 EM: Round [18] log likelihood: -331767.853036 EM: Round [19] log likelihood: -331767.775678 EM: Round [20] log likelihood: -331767.712407 EM: Round [21] log likelihood: -331767.660262 EM: Round [22] log likelihood: -331767.616975 EM: Round [23] log likelihood: -331767.580793 EM: Round [24] log likelihood: -331767.550347 EM: Round [25] log likelihood: -331767.524563 EM: Round [26] log likelihood: -331767.502591 EM: Round [27] log likelihood: -331767.483754 EM: Round [28] log likelihood: -331767.467511 EM: Round [29] log likelihood: -331767.453426 EM: Round [30] log likelihood: -331767.441145 EM: Round [31] log likelihood: -331767.430382 EM: Round [32] log likelihood: -331767.420902 EM: Round [33] log likelihood: -331767.412512 EM: Round [34] log likelihood: -331767.405053 EM: Round [35] log likelihood: -331767.398393 EM: Round [36] log likelihood: -331767.392422 EM: Round [37] log likelihood: -331767.387049 EM: Round [38] log likelihood: -331767.382194 EM: Round [39] log likelihood: -331767.377795 EM: Round [40] log likelihood: -331767.373794 EM: Round [41] log likelihood: -331767.370144 EM: Round [42] log likelihood: -331767.366806 EM: Round [43] log likelihood: -331767.363744 EM: Round [44] log likelihood: -331767.360929 EM: Round [45] log likelihood: -331767.358335 EM: Round [46] log likelihood: -331767.355938 EM: Round [47] log likelihood: -331767.353719 EM: Round [48] log likelihood: -331767.351662 EM: Round [49] log likelihood: -331767.349750 EM: Round [50] log likelihood: -331767.347970 EM: Round [51] log likelihood: -331767.346311 EM: Round [52] log likelihood: -331767.344761 EM: Round [53] log likelihood: -331767.343312 EM: Round [54] log likelihood: -331767.341955 EM: Round [55] log likelihood: -331767.340682 EM: Round [56] log likelihood: -331767.339487 EM: Round [57] log likelihood: -331767.338364 EM: Round [58] log likelihood: -331767.337306 EM: Round [59] log likelihood: -331767.336309 EM: Round [60] log likelihood: -331767.335369 EM: Round [61] log likelihood: -331767.334481 EM: Round [62] log likelihood: -331767.333641 EM: Round [63] log likelihood: -331767.332847 EM: Round [64] log likelihood: -331767.332094 EM: Round [65] log likelihood: -331767.331381 EM: Round [66] log likelihood: -331767.330704 EM: Round [67] log likelihood: -331767.330061 EM: Round [68] log likelihood: -331767.329450 EM: Round [69] log likelihood: -331767.328869 EM: Round [70] log likelihood: -331767.328315 EM: Round [71] log likelihood: -331767.327788 EM: Round [72] log likelihood: -331767.327285 EM: Round [73] log likelihood: -331767.326806 EM: Round [74] log likelihood: -331767.326348 EM: Round [75] log likelihood: -331767.325910 EM: Round [76] log likelihood: -331767.325491 EM: Round [77] log likelihood: -331767.325091 EM: Round [78] log likelihood: -331767.324708 EM: Round [79] log likelihood: -331767.324340 EM: Round [80] log likelihood: -331767.323988 EM: Round [81] log likelihood: -331767.323651 EM: Round [82] log likelihood: -331767.323326 EM: Round [83] log likelihood: -331767.323015 EM: Round [84] log likelihood: -331767.322716 EM: Round [85] log likelihood: -331767.322429 EM: Round [86] log likelihood: -331767.322153 EM: Round [87] log likelihood: -331767.321887 EM: Round [88] log likelihood: -331767.321631 EM: Round [89] log likelihood: -331767.321384 EM: Round [90] log likelihood: -331767.321147 EM: Round [91] log likelihood: -331767.320918 EM: Round [92] log likelihood: -331767.320697 EM: Round [93] log likelihood: -331767.320484 EM: Round [94] log likelihood: -331767.320279 EM: Round [95] log likelihood: -331767.320080 EM: Round [96] log likelihood: -331767.319889 EM: Round [97] log likelihood: -331767.319703 EM: Round [98] log likelihood: -331767.319524 EM: Round [99] log likelihood: -331767.319351 EM: Round [100] log likelihood: -331767.319184 EM: Round [101] log likelihood: -331767.319022 EM: Round [102] log likelihood: -331767.318865 EM: Round [103] log likelihood: -331767.318714 EM: Round [104] log likelihood: -331767.318567 EM: Round [105] log likelihood: -331767.318425 EM: Round [106] log likelihood: -331767.318287 EM: Round [107] log likelihood: -331767.318153 EM: Round [108] log likelihood: -331767.318024 EM: Round [109] log likelihood: -331767.317898 EM: Round [110] log likelihood: -331767.317777 EM: Round [111] log likelihood: -331767.317658 EM: Round [112] log likelihood: -331767.317544 EM: Round [113] log likelihood: -331767.317433 EM: Round [114] log likelihood: -331767.317325 EM: Round [115] log likelihood: -331767.317220 EM: Round [116] log likelihood: -331767.317119 EM: Round [117] log likelihood: -331767.317020 EM: Stopping iterations at round 117 due to insufficient improvement in likelihood. EM: Starting log likelihood: -331821.614951 EM: Round [1] log likelihood: -331712.991576 EM: Round [2] log likelihood: -331671.702479 EM: Round [3] log likelihood: -331652.011524 EM: Round [4] log likelihood: -331641.654425 EM: Round [5] log likelihood: -331635.898066 EM: Round [6] log likelihood: -331632.554925 EM: Round [7] log likelihood: -331630.529282 EM: Round [8] log likelihood: -331629.249557 EM: Round [9] log likelihood: -331628.408207 EM: Round [10] log likelihood: -331627.834548 EM: Round [11] log likelihood: -331627.430681 EM: Round [12] log likelihood: -331627.138491 EM: Round [13] log likelihood: -331626.922241 EM: Round [14] log likelihood: -331626.759179 EM: Round [15] log likelihood: -331626.634328 EM: Round [16] log likelihood: -331626.537518 EM: Round [17] log likelihood: -331626.461655 EM: Round [18] log likelihood: -331626.401668 EM: Round [19] log likelihood: -331626.353859 EM: Round [20] log likelihood: -331626.315488 EM: Round [21] log likelihood: -331626.284493 EM: Round [22] log likelihood: -331626.259308 EM: Round [23] log likelihood: -331626.238727 EM: Round [24] log likelihood: -331626.221818 EM: Round [25] log likelihood: -331626.207853 EM: Round [26] log likelihood: -331626.196260 EM: Round [27] log likelihood: -331626.186587 EM: Round [28] log likelihood: -331626.178476 EM: Round [29] log likelihood: -331626.171640 EM: Round [30] log likelihood: -331626.165849 EM: Round [31] log likelihood: -331626.160919 EM: Round [32] log likelihood: -331626.156701 EM: Round [33] log likelihood: -331626.153073 EM: Round [34] log likelihood: -331626.149936 EM: Round [35] log likelihood: -331626.147210 EM: Round [36] log likelihood: -331626.144828 EM: Round [37] log likelihood: -331626.142737 EM: Round [38] log likelihood: -331626.140891 EM: Round [39] log likelihood: -331626.139253 EM: Round [40] log likelihood: -331626.137792 EM: Round [41] log likelihood: -331626.136483 EM: Round [42] log likelihood: -331626.135303 EM: Round [43] log likelihood: -331626.134236 EM: Round [44] log likelihood: -331626.133266 EM: Round [45] log likelihood: -331626.132380 EM: Round [46] log likelihood: -331626.131567 EM: Round [47] log likelihood: -331626.130818 EM: Round [48] log likelihood: -331626.130126 EM: Round [49] log likelihood: -331626.129484 EM: Round [50] log likelihood: -331626.128886 EM: Round [51] log likelihood: -331626.128328 EM: Round [52] log likelihood: -331626.127804 EM: Round [53] log likelihood: -331626.127312 EM: Round [54] log likelihood: -331626.126849 EM: Round [55] log likelihood: -331626.126411 EM: Round [56] log likelihood: -331626.125996 EM: Round [57] log likelihood: -331626.125603 EM: Round [58] log likelihood: -331626.125228 EM: Round [59] log likelihood: -331626.124872 EM: Round [60] log likelihood: -331626.124532 EM: Round [61] log likelihood: -331626.124207 EM: Round [62] log likelihood: -331626.123895 EM: Round [63] log likelihood: -331626.123597 EM: Round [64] log likelihood: -331626.123311 EM: Round [65] log likelihood: -331626.123036 EM: Round [66] log likelihood: -331626.122771 EM: Round [67] log likelihood: -331626.122516 EM: Round [68] log likelihood: -331626.122271 EM: Round [69] log likelihood: -331626.122034 EM: Round [70] log likelihood: -331626.121806 EM: Round [71] log likelihood: -331626.121585 EM: Round [72] log likelihood: -331626.121371 EM: Round [73] log likelihood: -331626.121165 EM: Round [74] log likelihood: -331626.120965 EM: Round [75] log likelihood: -331626.120772 EM: Round [76] log likelihood: -331626.120584 EM: Round [77] log likelihood: -331626.120402 EM: Round [78] log likelihood: -331626.120226 EM: Round [79] log likelihood: -331626.120055 EM: Round [80] log likelihood: -331626.119889 EM: Round [81] log likelihood: -331626.119728 EM: Round [82] log likelihood: -331626.119571 EM: Round [83] log likelihood: -331626.119419 EM: Round [84] log likelihood: -331626.119272 EM: Round [85] log likelihood: -331626.119128 EM: Round [86] log likelihood: -331626.118988 EM: Round [87] log likelihood: -331626.118853 EM: Round [88] log likelihood: -331626.118720 EM: Round [89] log likelihood: -331626.118592 EM: Round [90] log likelihood: -331626.118467 EM: Round [91] log likelihood: -331626.118345 EM: Round [92] log likelihood: -331626.118226 EM: Round [93] log likelihood: -331626.118111 EM: Round [94] log likelihood: -331626.117999 EM: Round [95] log likelihood: -331626.117889 EM: Round [96] log likelihood: -331626.117782 EM: Round [97] log likelihood: -331626.117678 EM: Round [98] log likelihood: -331626.117577 EM: Round [99] log likelihood: -331626.117479 EM: Stopping iterations at round 99 due to insufficient improvement in likelihood. CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.UPRkJQ0EKL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.UPRkJQ0EKL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.UPRkJQ0EKL/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.UPRkJQ0EKL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.UPRkJQ0EKL/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.UPRkJQ0EKL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.UPRkJQ0EKL/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20 CMD: cp /tmp/nxf.UPRkJQ0EKL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.UPRkJQ0EKL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.UPRkJQ0EKL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.UPRkJQ0EKL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged CMD: ln -sf /tmp/nxf.UPRkJQ0EKL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.UPRkJQ0EKL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered * Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.UPRkJQ0EKL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 273616163 > /tmp/nxf.UPRkJQ0EKL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM * Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.UPRkJQ0EKL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.UPRkJQ0EKL/ctat_genome_lib_build_dir > /tmp/nxf.UPRkJQ0EKL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.UPRkJQ0EKL/ctat_genome_lib_build_dir --annotate /tmp/nxf.UPRkJQ0EKL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.UPRkJQ0EKL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot * Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.UPRkJQ0EKL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.UPRkJQ0EKL/ctat_genome_lib_build_dir -done, see /tmp/nxf.UPRkJQ0EKL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass * Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.UPRkJQ0EKL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.UPRkJQ0EKL/ctat_genome_lib_build_dir -filter_likely_RT_artifacts: (pass: 1582, filtered: 14210) * Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.UPRkJQ0EKL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001 * Running CMD: cp /tmp/nxf.UPRkJQ0EKL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv * Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.UPRkJQ0EKL/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000231933.7] WARNING, no entry stored in dbm for [ENSG00000205534.6] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000229739.4] WARNING, no entry stored in dbm for [ENSG00000269001.2] WARNING, no entry stored in dbm for [ENSG00000226049.3] WARNING, no entry stored in dbm for [ENSG00000260404.3] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000227893.1] WARNING, no entry stored in dbm for [ENSG00000259345.7] WARNING, no entry stored in dbm for [ENSG00000257612.2] WARNING, no entry stored in dbm for [ENSG00000284977.2] WARNING, no entry stored in dbm for [ENSG00000230559.1] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000223986.1] WARNING, no entry stored in dbm for [ENSG00000228303.1] WARNING, no entry stored in dbm for [ENSG00000225178.5] WARNING, no entry stored in dbm for [ENSG00000282458.1] WARNING, no entry stored in dbm for [ENSG00000234769.7] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000287411.1] WARNING, no entry stored in dbm for [ENSG00000219463.1] WARNING, no entry stored in dbm for [ENSG00000236477.1] WARNING, no entry stored in dbm for [ENSG00000224094.1] WARNING, no entry stored in dbm for [ENSG00000257074.3] WARNING, no entry stored in dbm for [ENSG00000241030.1] WARNING, no entry stored in dbm for [ENSG00000269900.3] WARNING, no entry stored in dbm for [ENSG00000287721.1] WARNING, no entry stored in dbm for [ENSG00000204188.7] WARNING, no entry stored in dbm for [ENSG00000248238.2] WARNING, no entry stored in dbm for [ENSG00000259673.6] WARNING, no entry stored in dbm for [ENSG00000255471.1] WARNING, no entry stored in dbm for [ENSG00000280136.2] WARNING, no entry stored in dbm for [ENSG00000231933.7] WARNING, no entry stored in dbm for [ENSG00000256116.1] WARNING, no entry stored in dbm for [ENSG00000238278.3] WARNING, no entry stored in dbm for [ENSG00000248243.1] WARNING, no entry stored in dbm for [ENSG00000270504.1] WARNING, no entry stored in dbm for [ENSG00000232499.2] WARNING, no entry stored in dbm for [ENSG00000287398.1] WARNING, no entry stored in dbm for [ENSG00000286215.1] WARNING, no entry stored in dbm for [ENSG00000260425.1] WARNING, no entry stored in dbm for [ENSG00000279047.4] WARNING, no entry stored in dbm for [ENSG00000253698.1] WARNING, no entry stored in dbm for [ENSG00000249001.5] WARNING, no entry stored in dbm for [ENSG00000282057.1] WARNING, no entry stored in dbm for [ENSG00000276538.1] WARNING, no entry stored in dbm for [ENSG00000224016.2] WARNING, no entry stored in dbm for [ENSG00000269001.2] WARNING, no entry stored in dbm for [ENSG00000267198.1] WARNING, no entry stored in dbm for [ENSG00000131484.4] WARNING, no entry stored in dbm for [ENSG00000238045.9] WARNING, no entry stored in dbm for [ENSG00000260573.4] WARNING, no entry stored in dbm for [ENSG00000204623.9] WARNING, no entry stored in dbm for [ENSG00000219665.8] WARNING, no entry stored in dbm for [ENSG00000215887.5] WARNING, no entry stored in dbm for [ENSG00000123870.10] WARNING, no entry stored in dbm for [ENSG00000234509.1] WARNING, no entry stored in dbm for [ENSG00000265542.5] WARNING, no entry stored in dbm for [ENSG00000250802.7] WARNING, no entry stored in dbm for [ENSG00000236829.9] WARNING, no entry stored in dbm for [ENSG00000274775.2] WARNING, no entry stored in dbm for [ENSG00000248208.1] WARNING, no entry stored in dbm for [ENSG00000286164.1] WARNING, no entry stored in dbm for [ENSG00000285162.1] WARNING, no entry stored in dbm for [ENSG00000282458.1] WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [ENSG00000280048.1] WARNING, no entry stored in dbm for [ENSG00000251003.9] WARNING, no entry stored in dbm for [ENSG00000229124.7] WARNING, no entry stored in dbm for [ENSG00000229124.7] WARNING, no entry stored in dbm for [ENSG00000272779.1] WARNING, no entry stored in dbm for [ENSG00000245248.8] WARNING, no entry stored in dbm for [ENSG00000226636.1] WARNING, no entry stored in dbm for [ENSG00000286728.1] WARNING, no entry stored in dbm for [ENSG00000227827.3] WARNING, no entry stored in dbm for [ENSG00000214198.8] WARNING, no entry stored in dbm for [ENSG00000234922.1] WARNING, no entry stored in dbm for [ENSG00000205913.7] WARNING, no entry stored in dbm for [ENSG00000234337.4] WARNING, no entry stored in dbm for [ENSG00000279666.1] WARNING, no entry stored in dbm for [ENSG00000227372.12] WARNING, no entry stored in dbm for [ENSG00000215158.9] WARNING, no entry stored in dbm for [ENSG00000189166.6] WARNING, no entry stored in dbm for [ENSG00000250256.1] WARNING, no entry stored in dbm for [ENSG00000234667.2] WARNING, no entry stored in dbm for [ENSG00000235211.4] WARNING, no entry stored in dbm for [ENSG00000228499.1] WARNING, no entry stored in dbm for [ENSG00000265788.2] WARNING, no entry stored in dbm for [ENSG00000237590.1] WARNING, no entry stored in dbm for [ENSG00000240549.2] WARNING, no entry stored in dbm for [ENSG00000172342.5] WARNING, no entry stored in dbm for [ENSG00000226314.8] WARNING, no entry stored in dbm for [ENSG00000237351.1] WARNING, no entry stored in dbm for [ENSG00000286488.1] WARNING, no entry stored in dbm for [ENSG00000274259.2] WARNING, no entry stored in dbm for [ENSG00000227646.7] WARNING, no entry stored in dbm for [ENSG00000197558.13] WARNING, no entry stored in dbm for [ENSG00000224353.2] WARNING, no entry stored in dbm for [ENSG00000232564.3] WARNING, no entry stored in dbm for [ENSG00000228427.3] WARNING, no entry stored in dbm for [ENSG00000230138.2] WARNING, no entry stored in dbm for [ENSG00000266433.6] WARNING, no entry stored in dbm for [ENSG00000234494.7] WARNING, no entry stored in dbm for [ENSG00000204529.4] WARNING, no entry stored in dbm for [ENSG00000287763.1] WARNING, no entry stored in dbm for [ENSG00000264714.1] WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [ENSG00000237037.9] WARNING, no entry stored in dbm for [ENSG00000237037.9] WARNING, no entry stored in dbm for [ENSG00000236172.7] WARNING, no entry stored in dbm for [ENSG00000248727.6] WARNING, no entry stored in dbm for [ENSG00000242849.2] WARNING, no entry stored in dbm for [ENSG00000223949.8] WARNING, no entry stored in dbm for [ENSG00000258952.2] WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [ENSG00000239921.6] WARNING, no entry stored in dbm for [ENSG00000266980.1] WARNING, no entry stored in dbm for [ENSG00000227339.1] WARNING, no entry stored in dbm for [ENSG00000180747.15] WARNING, no entry stored in dbm for [ENSG00000288663.1] WARNING, no entry stored in dbm for [ENSG00000214465.3] WARNING, no entry stored in dbm for [ENSG00000227141.2] WARNING, no entry stored in dbm for [ENSG00000214765.8] WARNING, no entry stored in dbm for [ENSG00000245958.6] WARNING, no entry stored in dbm for [ENSG00000213946.3] WARNING, no entry stored in dbm for [ENSG00000225741.1] WARNING, no entry stored in dbm for [ENSG00000244313.3] WARNING, no entry stored in dbm for [ENSG00000174028.6] WARNING, no entry stored in dbm for [ENSG00000268926.3] WARNING, no entry stored in dbm for [ENSG00000233071.3] WARNING, no entry stored in dbm for [ENSG00000213621.3] WARNING, no entry stored in dbm for [ENSG00000241888.2] WARNING, no entry stored in dbm for [ENSG00000230116.1] WARNING, no entry stored in dbm for [ENSG00000201793.1] WARNING, no entry stored in dbm for [ENSG00000222974.1] WARNING, no entry stored in dbm for [ENSG00000199691.1] WARNING, no entry stored in dbm for [ENSG00000271394.1] WARNING, no entry stored in dbm for [ENSG00000218208.1] WARNING, no entry stored in dbm for [ENSG00000237490.3] WARNING, no entry stored in dbm for [ENSG00000254602.2] WARNING, no entry stored in dbm for [ENSG00000212694.8] WARNING, no entry stored in dbm for [ENSG00000229235.1] WARNING, no entry stored in dbm for [ENSG00000224683.1] WARNING, no entry stored in dbm for [ENSG00000228007.1] WARNING, no entry stored in dbm for [ENSG00000219451.3] WARNING, no entry stored in dbm for [ENSG00000238015.2] WARNING, no entry stored in dbm for [ENSG00000223508.5] WARNING, no entry stored in dbm for [ENSG00000263006.6] WARNING, no entry stored in dbm for [ENSG00000206888.1] WARNING, no entry stored in dbm for [ENSG00000206975.1] WARNING, no entry stored in dbm for [ENSG00000199849.1] WARNING, no entry stored in dbm for [ENSG00000252343.1] WARNING, no entry stored in dbm for [ENSG00000240199.3] WARNING, no entry stored in dbm for [ENSG00000263069.6] WARNING, no entry stored in dbm for [ENSG00000263069.6] WARNING, no entry stored in dbm for [ENSG00000269288.1] WARNING, no entry stored in dbm for [ENSG00000252970.1] WARNING, no entry stored in dbm for [ENSG00000251136.9] WARNING, no entry stored in dbm for [ENSG00000266258.1] WARNING, no entry stored in dbm for [ENSG00000256967.1] WARNING, no entry stored in dbm for [ENSG00000230556.1] WARNING, no entry stored in dbm for [ENSG00000268754.4] WARNING, no entry stored in dbm for [ENSG00000268754.4] WARNING, no entry stored in dbm for [ENSG00000236741.4] WARNING, no entry stored in dbm for [ENSG00000246695.8] WARNING, no entry stored in dbm for [ENSG00000250938.6] WARNING, no entry stored in dbm for [ENSG00000261261.3] WARNING, no entry stored in dbm for [ENSG00000228592.2] WARNING, no entry stored in dbm for [ENSG00000249692.1] WARNING, no entry stored in dbm for [ENSG00000228415.3] WARNING, no entry stored in dbm for [ENSG00000214182.5] WARNING, no entry stored in dbm for [ENSG00000230487.8] WARNING, no entry stored in dbm for [ENSG00000225877.1] WARNING, no entry stored in dbm for [ENSG00000232398.1] WARNING, no entry stored in dbm for [ENSG00000277083.1] WARNING, no entry stored in dbm for [ENSG00000124224.17] WARNING, no entry stored in dbm for [ENSG00000249996.1] WARNING, no entry stored in dbm for [ENSG00000258084.6] WARNING, no entry stored in dbm for [ENSG00000241057.2] WARNING, no entry stored in dbm for [ENSG00000283907.1] WARNING, no entry stored in dbm for [ENSG00000244953.1] WARNING, no entry stored in dbm for [ENSG00000227827.3] WARNING, no entry stored in dbm for [ENSG00000226863.1] WARNING, no entry stored in dbm for [ENSG00000286654.1] WARNING, no entry stored in dbm for [ENSG00000271462.1] WARNING, no entry stored in dbm for [ENSG00000255185.6] WARNING, no entry stored in dbm for [ENSG00000279982.1] WARNING, no entry stored in dbm for [ENSG00000232931.6] WARNING, no entry stored in dbm for [ENSG00000285621.1] WARNING, no entry stored in dbm for [ENSG00000205853.12] WARNING, no entry stored in dbm for [ENSG00000225174.2] WARNING, no entry stored in dbm for [ENSG00000250290.1] WARNING, no entry stored in dbm for [ENSG00000234629.1] WARNING, no entry stored in dbm for [ENSG00000236409.2] WARNING, no entry stored in dbm for [ENSG00000237840.6] WARNING, no entry stored in dbm for [ENSG00000266904.6] WARNING, no entry stored in dbm for [ENSG00000276116.2] WARNING, no entry stored in dbm for [ENSG00000255226.2] WARNING, no entry stored in dbm for [ENSG00000200389.1] WARNING, no entry stored in dbm for [ENSG00000135502.19] WARNING, no entry stored in dbm for [ENSG00000259663.2] WARNING, no entry stored in dbm for [ENSG00000239213.6] WARNING, no entry stored in dbm for [ENSG00000179978.11] WARNING, no entry stored in dbm for [ENSG00000207190.1] WARNING, no entry stored in dbm for [ENSG00000200108.1] WARNING, no entry stored in dbm for [ENSG00000206772.1] WARNING, no entry stored in dbm for [ENSG00000202089.1] WARNING, no entry stored in dbm for [ENSG00000275976.5] WARNING, no entry stored in dbm for [ENSG00000213167.3] WARNING, no entry stored in dbm for [ENSG00000227769.7] WARNING, no entry stored in dbm for [ENSG00000226950.8] WARNING, no entry stored in dbm for [ENSG00000280007.1] WARNING, no entry stored in dbm for [ENSG00000221971.3] WARNING, no entry stored in dbm for [ENSG00000261446.4] WARNING, no entry stored in dbm for [ENSG00000261435.1] WARNING, no entry stored in dbm for [ENSG00000214081.8] WARNING, no entry stored in dbm for [ENSG00000228526.7] WARNING, no entry stored in dbm for [ENSG00000254349.6] WARNING, no entry stored in dbm for [ENSG00000204352.4] WARNING, no entry stored in dbm for [ENSG00000218537.1] WARNING, no entry stored in dbm for [ENSG00000227912.2] WARNING, no entry stored in dbm for [ENSG00000229623.1] WARNING, no entry stored in dbm for [ENSG00000288598.2] WARNING, no entry stored in dbm for [ENSG00000231312.7] WARNING, no entry stored in dbm for [ENSG00000267278.6] WARNING, no entry stored in dbm for [ENSG00000206028.1] WARNING, no entry stored in dbm for [ENSG00000237550.5] WARNING, no entry stored in dbm for [ENSG00000261722.1] WARNING, no entry stored in dbm for [ENSG00000200156.1] WARNING, no entry stored in dbm for [ENSG00000199568.1] WARNING, no entry stored in dbm for [ENSG00000093100.13] WARNING, no entry stored in dbm for [ENSG00000225465.10] WARNING, no entry stored in dbm for [ENSG00000227110.7] WARNING, no entry stored in dbm for [ENSG00000287737.1] WARNING, no entry stored in dbm for [ENSG00000234222.6] WARNING, no entry stored in dbm for [ENSG00000255008.3] WARNING, no entry stored in dbm for [ENSG00000251595.7] WARNING, no entry stored in dbm for [ENSG00000257842.6] WARNING, no entry stored in dbm for [ENSG00000258404.1] WARNING, no entry stored in dbm for [ENSG00000258819.2] WARNING, no entry stored in dbm for [ENSG00000250708.2] WARNING, no entry stored in dbm for [ENSG00000273033.2] WARNING, no entry stored in dbm for [ENSG00000235304.2] WARNING, no entry stored in dbm for [ENSG00000233806.7] WARNING, no entry stored in dbm for [ENSG00000267603.1] WARNING, no entry stored in dbm for [ENSG00000213250.5] WARNING, no entry stored in dbm for [ENSG00000228393.4] WARNING, no entry stored in dbm for [ENSG00000282508.2] WARNING, no entry stored in dbm for [ENSG00000225269.3] WARNING, no entry stored in dbm for [ENSG00000225269.3] WARNING, no entry stored in dbm for [ENSG00000237854.3] WARNING, no entry stored in dbm for [ENSG00000228221.6] WARNING, no entry stored in dbm for [ENSG00000233237.8] WARNING, no entry stored in dbm for [ENSG00000229437.2] WARNING, no entry stored in dbm for [ENSG00000188185.13] WARNING, no entry stored in dbm for [ENSG00000231329.8] WARNING, no entry stored in dbm for [ENSG00000259275.4] WARNING, no entry stored in dbm for [ENSG00000165121.11] WARNING, no entry stored in dbm for [ENSG00000287167.1] WARNING, no entry stored in dbm for [ENSG00000207441.1] WARNING, no entry stored in dbm for [ENSG00000213771.3] WARNING, no entry stored in dbm for [ENSG00000215089.3] WARNING, no entry stored in dbm for [ENSG00000279484.2] WARNING, no entry stored in dbm for [ENSG00000267077.1] WARNING, no entry stored in dbm for [ENSG00000230646.1] WARNING, no entry stored in dbm for [ENSG00000225470.8] WARNING, no entry stored in dbm for [ENSG00000260473.2] WARNING, no entry stored in dbm for [ENSG00000254777.5] WARNING, no entry stored in dbm for [ENSG00000225264.3] WARNING, no entry stored in dbm for [ENSG00000286378.1] WARNING, no entry stored in dbm for [ENSG00000229926.1] WARNING, no entry stored in dbm for [ENSG00000199568.1] WARNING, no entry stored in dbm for [ENSG00000231367.6] WARNING, no entry stored in dbm for [ENSG00000227733.10] WARNING, no entry stored in dbm for [ENSG00000258377.1] WARNING, no entry stored in dbm for [ENSG00000259335.1] WARNING, no entry stored in dbm for [ENSG00000251557.2] WARNING, no entry stored in dbm for [ENSG00000206228.4] WARNING, no entry stored in dbm for [ENSG00000250011.1] WARNING, no entry stored in dbm for [ENSG00000249673.7] WARNING, no entry stored in dbm for [ENSG00000243753.5] WARNING, no entry stored in dbm for [ENSG00000236871.7] WARNING, no entry stored in dbm for [ENSG00000214922.9] WARNING, no entry stored in dbm for [ENSG00000248785.1] WARNING, no entry stored in dbm for [ENSG00000233299.1] WARNING, no entry stored in dbm for [ENSG00000278621.1] WARNING, no entry stored in dbm for [ENSG00000274775.2] WARNING, no entry stored in dbm for [ENSG00000265541.1] WARNING, no entry stored in dbm for [ENSG00000183666.17] WARNING, no entry stored in dbm for [ENSG00000214433.4] WARNING, no entry stored in dbm for [ENSG00000229608.1] WARNING, no entry stored in dbm for [ENSG00000251898.1] WARNING, no entry stored in dbm for [ENSG00000252992.1] WARNING, no entry stored in dbm for [ENSG00000250903.9] WARNING, no entry stored in dbm for [ENSG00000257915.1] WARNING, no entry stored in dbm for [ENSG00000254572.2] WARNING, no entry stored in dbm for [ENSG00000238035.8] WARNING, no entry stored in dbm for [ENSG00000226549.3] WARNING, no entry stored in dbm for [ENSG00000259345.7] WARNING, no entry stored in dbm for [ENSG00000237424.1] WARNING, no entry stored in dbm for [ENSG00000254285.3] WARNING, no entry stored in dbm for [ENSG00000213338.3] WARNING, no entry stored in dbm for [ENSG00000234983.1] WARNING, no entry stored in dbm for [ENSG00000285611.2] WARNING, no entry stored in dbm for [ENSG00000249163.3] WARNING, no entry stored in dbm for [ENSG00000180581.7] WARNING, no entry stored in dbm for [ENSG00000287467.1] WARNING, no entry stored in dbm for [ENSG00000226310.1] WARNING, no entry stored in dbm for [ENSG00000248148.1] WARNING, no entry stored in dbm for [ENSG00000260464.1] WARNING, no entry stored in dbm for [ENSG00000230876.8] WARNING, no entry stored in dbm for [ENSG00000239467.6] WARNING, no entry stored in dbm for [ENSG00000228113.7] WARNING, no entry stored in dbm for [ENSG00000264044.1] WARNING, no entry stored in dbm for [ENSG00000196295.12] WARNING, no entry stored in dbm for [ENSG00000227373.6] WARNING, no entry stored in dbm for [ENSG00000229914.1] WARNING, no entry stored in dbm for [ENSG00000250863.2] WARNING, no entry stored in dbm for [ENSG00000255867.1] WARNING, no entry stored in dbm for [ENSG00000169668.11] WARNING, no entry stored in dbm for [ENSG00000286183.1] WARNING, no entry stored in dbm for [ENSG00000228208.7] WARNING, no entry stored in dbm for [ENSG00000263724.2] WARNING, no entry stored in dbm for [ENSG00000231607.13] WARNING, no entry stored in dbm for [ENSG00000231607.13] WARNING, no entry stored in dbm for [ENSG00000254275.6] WARNING, no entry stored in dbm for [ENSG00000261664.5] WARNING, no entry stored in dbm for [ENSG00000222041.11] WARNING, no entry stored in dbm for [ENSG00000276077.4] WARNING, no entry stored in dbm for [ENSG00000276710.4] WARNING, no entry stored in dbm for [ENSG00000246203.2] WARNING, no entry stored in dbm for [ENSG00000278932.4] WARNING, no entry stored in dbm for [ENSG00000278932.4] WARNING, no entry stored in dbm for [ENSG00000236107.10] WARNING, no entry stored in dbm for [ENSG00000215068.8] WARNING, no entry stored in dbm for [ENSG00000231312.7] WARNING, no entry stored in dbm for [ENSG00000224540.1] WARNING, no entry stored in dbm for [ENSG00000249035.7] WARNING, no entry stored in dbm for [ENSG00000260698.1] WARNING, no entry stored in dbm for [ENSG00000228775.8] WARNING, no entry stored in dbm for [ENSG00000226800.5] WARNING, no entry stored in dbm for [ENSG00000285756.2] WARNING, no entry stored in dbm for [ENSG00000226445.2] WARNING, no entry stored in dbm for [ENSG00000280594.1] WARNING, no entry stored in dbm for [ENSG00000226259.10] WARNING, no entry stored in dbm for [ENSG00000236105.1] WARNING, no entry stored in dbm for [ENSG00000282851.2] WARNING, no entry stored in dbm for [ENSG00000245573.9] WARNING, no entry stored in dbm for [ENSG00000258057.6] WARNING, no entry stored in dbm for [ENSG00000279021.1] WARNING, no entry stored in dbm for [ENSG00000265927.1] WARNING, no entry stored in dbm for [ENSG00000261102.2] WARNING, no entry stored in dbm for [ENSG00000275613.2] WARNING, no entry stored in dbm for [ENSG00000272195.1] WARNING, no entry stored in dbm for [ENSG00000244198.7] WARNING, no entry stored in dbm for [ENSG00000215158.9] WARNING, no entry stored in dbm for [ENSG00000255503.1] WARNING, no entry stored in dbm for [ENSG00000224905.7] WARNING, no entry stored in dbm for [ENSG00000256035.1] WARNING, no entry stored in dbm for [ENSG00000230551.4] WARNING, no entry stored in dbm for [ENSG00000219529.2] WARNING, no entry stored in dbm for [ENSG00000239393.1] WARNING, no entry stored in dbm for [ENSG00000266931.2] WARNING, no entry stored in dbm for [ENSG00000240237.1] WARNING, no entry stored in dbm for [ENSG00000288531.1] WARNING, no entry stored in dbm for [ENSG00000285799.1] WARNING, no entry stored in dbm for [ENSG00000254741.1] WARNING, no entry stored in dbm for [ENSG00000288088.1] WARNING, no entry stored in dbm for [ENSG00000283696.1] WARNING, no entry stored in dbm for [ENSG00000287356.1] WARNING, no entry stored in dbm for [ENSG00000231073.1] WARNING, no entry stored in dbm for [ENSG00000170161.7] WARNING, no entry stored in dbm for [ENSG00000231212.1] WARNING, no entry stored in dbm for [ENSG00000237208.1] WARNING, no entry stored in dbm for [ENSG00000227619.3] WARNING, no entry stored in dbm for [ENSG00000234640.1] WARNING, no entry stored in dbm for [ENSG00000272405.1] WARNING, no entry stored in dbm for [ENSG00000229953.1] WARNING, no entry stored in dbm for [ENSG00000286215.1] WARNING, no entry stored in dbm for [ENSG00000285637.2] WARNING, no entry stored in dbm for [ENSG00000239665.8] WARNING, no entry stored in dbm for [ENSG00000258377.1] WARNING, no entry stored in dbm for [ENSG00000258377.1] WARNING, no entry stored in dbm for [ENSG00000274261.2] WARNING, no entry stored in dbm for [ENSG00000258875.6] WARNING, no entry stored in dbm for [ENSG00000286587.1] WARNING, no entry stored in dbm for [ENSG00000231881.2] WARNING, no entry stored in dbm for [ENSG00000183239.5] WARNING, no entry stored in dbm for [ENSG00000243730.2] WARNING, no entry stored in dbm for [ENSG00000279930.1] WARNING, no entry stored in dbm for [ENSG00000280011.1] WARNING, no entry stored in dbm for [ENSG00000284633.1] WARNING, no entry stored in dbm for [ENSG00000279136.1] WARNING, no entry stored in dbm for [ENSG00000207579.1] WARNING, no entry stored in dbm for [ENSG00000226310.1] WARNING, no entry stored in dbm for [ENSG00000223756.7] WARNING, no entry stored in dbm for [ENSG00000248692.5] WARNING, no entry stored in dbm for [ENSG00000161912.18] WARNING, no entry stored in dbm for [ENSG00000286912.1] WARNING, no entry stored in dbm for [ENSG00000180139.11] WARNING, no entry stored in dbm for [ENSG00000229800.1] WARNING, no entry stored in dbm for [ENSG00000279278.1] WARNING, no entry stored in dbm for [ENSG00000237017.1] WARNING, no entry stored in dbm for [ENSG00000284964.1] WARNING, no entry stored in dbm for [ENSG00000281741.2] WARNING, no entry stored in dbm for [ENSG00000261499.2] WARNING, no entry stored in dbm for [ENSG00000265041.1] WARNING, no entry stored in dbm for [ENSG00000249574.1] WARNING, no entry stored in dbm for [ENSG00000229797.2] WARNING, no entry stored in dbm for [ENSG00000261404.7] WARNING, no entry stored in dbm for [ENSG00000236792.1] WARNING, no entry stored in dbm for [ENSG00000229930.1] WARNING, no entry stored in dbm for [ENSG00000264107.1] WARNING, no entry stored in dbm for [ENSG00000250999.2] WARNING, no entry stored in dbm for [ENSG00000280064.1] WARNING, no entry stored in dbm for [ENSG00000276484.1] WARNING, no entry stored in dbm for [ENSG00000276484.1] WARNING, no entry stored in dbm for [ENSG00000276484.1] WARNING, no entry stored in dbm for [ENSG00000276484.1] WARNING, no entry stored in dbm for [ENSG00000257398.8] WARNING, no entry stored in dbm for [ENSG00000233031.1] WARNING, no entry stored in dbm for [ENSG00000260196.1] WARNING, no entry stored in dbm for [ENSG00000280248.1] WARNING, no entry stored in dbm for [ENSG00000286619.1] WARNING, no entry stored in dbm for [ENSG00000284675.1] WARNING, no entry stored in dbm for [ENSG00000215692.2] WARNING, no entry stored in dbm for [ENSG00000250159.7] WARNING, no entry stored in dbm for [ENSG00000260522.1] WARNING, no entry stored in dbm for [ENSG00000258130.8] WARNING, no entry stored in dbm for [ENSG00000225108.1] WARNING, no entry stored in dbm for [ENSG00000259692.6] WARNING, no entry stored in dbm for [ENSG00000251574.8] WARNING, no entry stored in dbm for [ENSG00000285042.1] WARNING, no entry stored in dbm for [ENSG00000244538.1] WARNING, no entry stored in dbm for [ENSG00000251378.1] WARNING, no entry stored in dbm for [ENSG00000249275.1] WARNING, no entry stored in dbm for [ENSG00000279811.1] WARNING, no entry stored in dbm for [ENSG00000228852.6] WARNING, no entry stored in dbm for [ENSG00000228830.1] WARNING, no entry stored in dbm for [ENSG00000224016.2] WARNING, no entry stored in dbm for [ENSG00000287588.1] WARNING, no entry stored in dbm for [ENSG00000272953.1] WARNING, no entry stored in dbm for [ENSG00000279901.1] WARNING, no entry stored in dbm for [ENSG00000287826.1] WARNING, no entry stored in dbm for [ENSG00000264164.1] WARNING, no entry stored in dbm for [ENSG00000264151.6] WARNING, no entry stored in dbm for [ENSG00000277229.1] WARNING, no entry stored in dbm for [ENSG00000184616.9] WARNING, no entry stored in dbm for [ENSG00000286935.1] WARNING, no entry stored in dbm for [ENSG00000216285.5] WARNING, no entry stored in dbm for [ENSG00000286069.2] WARNING, no entry stored in dbm for [ENSG00000234072.1] WARNING, no entry stored in dbm for [ENSG00000239985.2] WARNING, no entry stored in dbm for [ENSG00000224365.1] WARNING, no entry stored in dbm for [ENSG00000287250.1] WARNING, no entry stored in dbm for [ENSG00000287188.1] WARNING, no entry stored in dbm for [ENSG00000257337.7] WARNING, no entry stored in dbm for [ENSG00000236172.7] WARNING, no entry stored in dbm for [ENSG00000197099.8] WARNING, no entry stored in dbm for [ENSG00000228801.6] WARNING, no entry stored in dbm for [ENSG00000212664.5] WARNING, no entry stored in dbm for [ENSG00000263887.7] WARNING, no entry stored in dbm for [ENSG00000259433.2] WARNING, no entry stored in dbm for [ENSG00000253919.1] WARNING, no entry stored in dbm for [ENSG00000279523.1] WARNING, no entry stored in dbm for [ENSG00000267040.6] WARNING, no entry stored in dbm for [ENSG00000260963.2] WARNING, no entry stored in dbm for [ENSG00000260693.1] WARNING, no entry stored in dbm for [ENSG00000245904.4] WARNING, no entry stored in dbm for [ENSG00000236833.1] WARNING, no entry stored in dbm for [ENSG00000242327.1] WARNING, no entry stored in dbm for [ENSG00000240669.1] WARNING, no entry stored in dbm for [ENSG00000244436.2] WARNING, no entry stored in dbm for [ENSG00000174171.6] WARNING, no entry stored in dbm for [ENSG00000285106.2] WARNING, no entry stored in dbm for [ENSG00000218175.2] WARNING, no entry stored in dbm for [ENSG00000269032.1] WARNING, no entry stored in dbm for [ENSG00000253166.2] WARNING, no entry stored in dbm for [ENSG00000272384.1] WARNING, no entry stored in dbm for [ENSG00000232386.9] WARNING, no entry stored in dbm for [ENSG00000232386.9] WARNING, no entry stored in dbm for [ENSG00000267784.1] WARNING, no entry stored in dbm for [ENSG00000268884.1] WARNING, no entry stored in dbm for [ENSG00000230721.1] WARNING, no entry stored in dbm for [ENSG00000283459.1] WARNING, no entry stored in dbm for [ENSG00000238045.9] WARNING, no entry stored in dbm for [ENSG00000259780.3] WARNING, no entry stored in dbm for [ENSG00000257403.2] WARNING, no entry stored in dbm for [ENSG00000189149.12] WARNING, no entry stored in dbm for [ENSG00000230189.7] WARNING, no entry stored in dbm for [ENSG00000244657.1] WARNING, no entry stored in dbm for [ENSG00000276651.1] WARNING, no entry stored in dbm for [ENSG00000267009.6] WARNING, no entry stored in dbm for [ENSG00000233565.1] WARNING, no entry stored in dbm for [ENSG00000257074.3] WARNING, no entry stored in dbm for [ENSG00000244055.2] WARNING, no entry stored in dbm for [ENSG00000218586.3] WARNING, no entry stored in dbm for [ENSG00000268460.2] WARNING, no entry stored in dbm for [ENSG00000226040.3] WARNING, no entry stored in dbm for [ENSG00000264044.1] WARNING, no entry stored in dbm for [ENSG00000262879.6] WARNING, no entry stored in dbm for [ENSG00000274712.2] WARNING, no entry stored in dbm for [ENSG00000205485.13] WARNING, no entry stored in dbm for [ENSG00000205485.13] WARNING, no entry stored in dbm for [ENSG00000267698.1] WARNING, no entry stored in dbm for [ENSG00000214330.4] WARNING, no entry stored in dbm for [ENSG00000251595.7] WARNING, no entry stored in dbm for [ENSG00000285756.2] * STAR-Fusion complete. See output: /tmp/nxf.UPRkJQ0EKL/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)