[W::hts_idx_load3] The index file is older than the data file: BVT_FFPE_TRNA_bst_02_A23WKFTLT4_2.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file:  ref_annot.bed  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	340223008
Known Splicing Events:	337252919
Partial Novel Splicing Events:	1415629
Novel Splicing Events:	1427358
Filtered Splicing Events:	127102

Total splicing  Junctions:	497299
Known Splicing Junctions:	254702
Partial Novel Splicing Junctions:	126140
Novel Splicing Junctions:	116457

===================================================================
Create BED file ...
Create Interact file ...