AIH curated blacklist: matched 7 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 193
Pass (FILTER=PASS): 8 (4.1%)
Fail (FILTER=FAIL): 185 (95.9%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 7
All 7 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 77
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 14
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 12
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 12
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 11
confidence_below_min(low<high): 10
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 9
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 9
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 9
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 4
confidence_below_min(medium<high);aih_curated_blacklist: 3
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 3
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 2
confidence_below_min(low<high);aih_curated_blacklist: 2
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 2
Breakdown by confidence:
high: 8 pass, 1 fail (total: 9)
low: 0 pass, 73 fail (total: 73)
medium: 0 pass, 111 fail (total: 111)
Arriba filter: 193 rows -> 8 PASS; wrote BVT_FFPE_TRNA_utn_04_A23WKFTLT4_1.arriba.fusions.filtered.tsv and BVT_FFPE_TRNA_utn_04_A23WKFTLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: BVT_FFPE_TRNA_utn_04_A23WKFTLT4_1.arriba.fusions.filter_summary.txt