AIH curated blacklist: matched 15 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 378
Pass (FILTER=PASS): 70 (18.5%)
Fail (FILTER=FAIL): 308 (81.5%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 15
All 15 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 75
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 36
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 25
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 24
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 17
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 16
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 15
confidence_below_min(low<high): 13
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 13
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 12
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 11
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 9
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 6
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 5
confidence_below_min(medium<high);aih_curated_blacklist: 5
Breakdown by confidence:
high: 70 pass, 13 fail (total: 83)
low: 0 pass, 120 fail (total: 120)
medium: 0 pass, 175 fail (total: 175)
Arriba filter: 378 rows -> 70 PASS; wrote BVT_FFPE_TRNA_bst_05_A23WKFTLT4_1.arriba.fusions.filtered.tsv and BVT_FFPE_TRNA_bst_05_A23WKFTLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: BVT_FFPE_TRNA_bst_05_A23WKFTLT4_1.arriba.fusions.filter_summary.txt