[W::hts_idx_load3] The index file is older than the data file: BVT_FFPE_TRNA_bst_01_01_A23WKFTLT4_1.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file:  ref_annot.bed  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	265008097
Known Splicing Events:	262293256
Partial Novel Splicing Events:	1281172
Novel Splicing Events:	1270823
Filtered Splicing Events:	162846

Total splicing  Junctions:	475779
Known Splicing Junctions:	240999
Partial Novel Splicing Junctions:	106099
Novel Splicing Junctions:	128681

===================================================================
Create BED file ...
Create Interact file ...