.command.err - Workdir - NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (BVT_FFPE_TRNA_bld_01_A23WKFTLT4_2)

File Info

Filename: .command.err
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/48/c6684f805d7fd549faecf99ded00d3/.command.err
Size: 558 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (BVT_FFPE_TRNA_bld_01_A23WKFTLT4_2)
Attempt

Content

Processing Kallisto file: BVT_FFPE_TRNA_bld_01_A23WKFTLT4_2/abundance.h5
Successfully converted BVT_FFPE_TRNA_bld_01_A23WKFTLT4_2/abundance.h5 to BVT_FFPE_TRNA_bld_01_A23WKFTLT4_2_kallisto_mqc.tsv
  Sample: BVT_FFPE_TRNA_bld_01_A23WKFTLT4_2
  Mean Fragment Length: 117.2 bp
  Median Fragment Length: 113.0 bp
  pct_mito_est_counts: 0.037%
  pct_ribo_est_counts: 1.174%
  pct_hk_est_counts: 0.482%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.068%
  pct_ribo_tpm: 3.229%
  pct_hk_tpm: 0.692%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 5.829%