-ctat genome lib [/tmp/nxf.pul3AHkNpc/ctat_genome_lib_build_dir] validates. CMD: mkdir -p /tmp/nxf.pul3AHkNpc/./_starF_checkpoints CMD: mkdir -p /tmp/nxf.pul3AHkNpc/./star-fusion.preliminary -sample contains 83288794 rnaseq fragments * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.pul3AHkNpc/ctat_genome_lib_build_dir -J /tmp/nxf.pul3AHkNpc/BVT_FFPE_TRNA_crv_01_A23WKFTLT4_1.Chimeric.out.junction -O /tmp/nxf.pul3AHkNpc/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 -parsing fusion evidence: /tmp/nxf.pul3AHkNpc/BVT_FFPE_TRNA_crv_01_A23WKFTLT4_1.Chimeric.out.junction -building interval tree based on /tmp/nxf.pul3AHkNpc/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.08 min). -mapping reads to genes [10000], rate=42857.14/min [20000], rate=44444.44/min [30000], rate=47368.42/min [40000], rate=53333.33/min [50000], rate=48387.10/min [60000], rate=46153.85/min [70000], rate=45652.17/min [80000], rate=44859.81/min [90000], rate=45000.00/min [100000], rate=45454.55/min [110000], rate=46808.51/min [120000], rate=48000.00/min [130000], rate=48750.00/min [140000], rate=49704.14/min [150000], rate=51136.36/min [160000], rate=52173.91/min [170000], rate=51000.00/min [180000], rate=50232.56/min [190000], rate=49781.66/min [200000], rate=49382.72/min [210000], rate=49802.37/min [220000], rate=49624.06/min [230000], rate=49110.32/min [240000], rate=48813.56/min [250000], rate=49180.33/min [260000], rate=49211.36/min [270000], rate=49541.28/min [280000], rate=50299.40/min [290000], rate=50728.86/min [300000], rate=51282.05/min [310000], rate=50681.20/min [320000], rate=50261.78/min [330000], rate=49874.06/min [340000], rate=49635.04/min [350000], rate=49645.39/min [360000], rate=49655.17/min [370000], rate=49664.43/min [380000], rate=49673.20/min [390000], rate=49681.53/min [400000], rate=49689.44/min [410000], rate=49797.57/min [420000], rate=50000.00/min [430000], rate=50390.62/min [440000], rate=50769.23/min [450000], rate=51330.80/min [460000], rate=51111.11/min [470000], rate=50994.58/min [480000], rate=50704.23/min [490000], rate=50515.46/min [500000], rate=50505.05/min [510000], rate=50578.51/min [520000], rate=50814.33/min [530000], rate=50961.54/min [540000], rate=51428.57/min [550000], rate=51805.34/min [560000], rate=52012.38/min [570000], rate=51896.81/min [580000], rate=51555.56/min [590000], rate=51453.49/min [600000], rate=51502.15/min [610000], rate=51404.49/min [620000], rate=51452.28/min [630000], rate=51709.99/min [640000], rate=51821.86/min [650000], rate=52139.04/min [660000], rate=52450.33/min [670000], rate=52825.23/min [680000], rate=52987.01/min [690000], rate=52941.18/min [700000], rate=52830.19/min [710000], rate=52919.25/min [720000], rate=52941.18/min [730000], rate=53155.34/min [740000], rate=53301.32/min [750000], rate=53571.43/min [760000], rate=53964.50/min -building interval tree based on /tmp/nxf.pul3AHkNpc/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=66666.67/min [20000], rate=57142.86/min [30000], rate=64285.71/min [40000], rate=68571.43/min [50000], rate=62500.00/min [60000], rate=61016.95/min [70000], rate=60869.57/min [80000], rate=61538.46/min [90000], rate=58695.65/min [100000], rate=55555.56/min [110000], rate=55000.00/min [120000], rate=55384.62/min [130000], rate=56115.11/min [140000], rate=58333.33/min [150000], rate=57324.84/min [160000], rate=56804.73/min [170000], rate=56353.59/min [180000], rate=55958.55/min [190000], rate=56435.64/min [200000], rate=56872.04/min [210000], rate=57534.25/min [220000], rate=58928.57/min [230000], rate=59740.26/min [240000], rate=58775.51/min [250000], rate=57915.06/min [260000], rate=57352.94/min [270000], rate=56445.99/min [280000], rate=56187.29/min [290000], rate=55948.55/min [300000], rate=55727.55/min [310000], rate=55522.39/min [320000], rate=55491.33/min [330000], rate=55307.26/min [340000], rate=55284.55/min [350000], rate=55263.16/min [360000], rate=54822.34/min [370000], rate=54679.80/min [380000], rate=54807.69/min [390000], rate=54545.45/min [400000], rate=54421.77/min [410000], rate=54424.78/min [420000], rate=54663.77/min [430000], rate=54893.62/min [440000], rate=54885.65/min [450000], rate=54878.05/min [460000], rate=55200.00/min [470000], rate=55511.81/min [480000], rate=55922.33/min [490000], rate=56106.87/min [500000], rate=55555.56/min [510000], rate=54838.71/min [520000], rate=54260.87/min [530000], rate=53898.31/min [540000], rate=53465.35/min [550000], rate=53311.79/min [560000], rate=53333.33/min [570000], rate=53437.50/min [580000], rate=53538.46/min [590000], rate=53717.75/min [600000], rate=53811.66/min [610000], rate=53902.80/min [620000], rate=53991.29/min [630000], rate=54310.34/min [640000], rate=54545.45/min [650000], rate=54852.32/min [660000], rate=55153.20/min [670000], rate=55371.90/min [680000], rate=55661.66/min [690000], rate=55945.95/min [700000], rate=56149.73/min [710000], rate=55759.16/min [720000], rate=55384.62/min [730000], rate=55094.34/min [740000], rate=54545.45/min [750000], rate=54216.87/min [760000], rate=54028.44/min -building interval tree based on /tmp/nxf.pul3AHkNpc/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=31578.95/min [20000], rate=32432.43/min [30000], rate=32727.27/min [40000], rate=33333.33/min [50000], rate=35294.12/min [60000], rate=37894.74/min [70000], rate=40000.00/min [80000], rate=41025.64/min [90000], rate=42519.69/min [100000], rate=44444.44/min [110000], rate=46478.87/min [120000], rate=45000.00/min [130000], rate=43575.42/min [140000], rate=42000.00/min [150000], rate=41284.40/min [160000], rate=40506.33/min [170000], rate=40157.48/min [180000], rate=40298.51/min [190000], rate=40000.00/min [200000], rate=39735.10/min [210000], rate=40000.00/min [220000], rate=40243.90/min [230000], rate=40233.24/min [240000], rate=40336.13/min [250000], rate=40540.54/min [260000], rate=40731.07/min [270000], rate=41221.37/min [280000], rate=41687.34/min [290000], rate=42233.01/min [300000], rate=42654.03/min [310000], rate=42956.12/min [320000], rate=43340.86/min [330000], rate=43612.33/min [340000], rate=44060.48/min [350000], rate=44397.46/min [360000], rate=44813.28/min [370000], rate=45213.85/min [380000], rate=45600.00/min [390000], rate=45972.50/min [400000], rate=47058.82/min [410000], rate=48140.90/min [420000], rate=48554.91/min [430000], rate=49142.86/min [440000], rate=49717.51/min [450000], rate=50847.46/min [460000], rate=51492.54/min [470000], rate=51838.24/min [480000], rate=52554.74/min [490000], rate=52972.97/min [500000], rate=53380.78/min [510000], rate=53778.56/min [520000], rate=54072.79/min [530000], rate=54081.63/min [540000], rate=54271.36/min [550000], rate=54635.76/min [560000], rate=54991.82/min [570000], rate=55250.40/min [580000], rate=55063.29/min [590000], rate=54377.88/min [600000], rate=53892.22/min [610000], rate=53744.49/min [620000], rate=52991.45/min [630000], rate=52719.67/min [640000], rate=52459.02/min [650000], rate=52489.91/min [660000], rate=52519.89/min [670000], rate=52549.02/min [680000], rate=52509.65/min [690000], rate=52471.48/min [700000], rate=52697.62/min [710000], rate=53051.06/min [720000], rate=53399.26/min [730000], rate=53479.85/min [740000], rate=53301.32/min [750000], rate=53128.69/min [760000], rate=53146.85/min -building interval tree based on /tmp/nxf.pul3AHkNpc/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.08 min). -mapping reads to genes [10000], rate=85714.29/min [20000], rate=100000.00/min [30000], rate=100000.00/min [40000], rate=92307.69/min [50000], rate=90909.09/min [60000], rate=92307.69/min [70000], rate=95454.55/min [80000], rate=96000.00/min [90000], rate=98181.82/min [100000], rate=75000.00/min [110000], rate=61682.24/min [120000], rate=54961.83/min [130000], rate=50649.35/min [140000], rate=47191.01/min [150000], rate=44776.12/min [160000], rate=42857.14/min [170000], rate=41463.41/min [180000], rate=40754.72/min [190000], rate=39860.14/min [200000], rate=39344.26/min [210000], rate=38769.23/min [220000], rate=38596.49/min [230000], rate=38440.11/min [240000], rate=38297.87/min [250000], rate=38167.94/min [260000], rate=38141.81/min [270000], rate=38117.65/min [280000], rate=38181.82/min [290000], rate=38157.89/min [300000], rate=38135.59/min [310000], rate=38114.75/min [320000], rate=38019.80/min [330000], rate=38076.92/min [340000], rate=38636.36/min [350000], rate=38961.04/min [360000], rate=39488.12/min [370000], rate=40072.20/min [380000], rate=40569.40/min [390000], rate=40837.70/min [400000], rate=41025.64/min [410000], rate=41206.03/min [420000], rate=41447.37/min [430000], rate=41815.24/min [440000], rate=42240.00/min [450000], rate=42721.52/min [460000], rate=43125.00/min [470000], rate=43585.78/min [480000], rate=44375.96/min [490000], rate=45300.46/min [500000], rate=45871.56/min [510000], rate=46504.56/min [520000], rate=46987.95/min [530000], rate=47891.57/min [540000], rate=48795.18/min [550000], rate=49327.35/min [560000], rate=49630.72/min [570000], rate=49067.43/min [580000], rate=48876.40/min [590000], rate=48626.37/min [600000], rate=48583.00/min [610000], rate=48605.58/min [620000], rate=48563.97/min [630000], rate=48648.65/min [640000], rate=48854.96/min [650000], rate=49118.39/min [660000], rate=49315.07/min [670000], rate=49144.25/min [680000], rate=48862.28/min [690000], rate=48705.88/min [700000], rate=48611.11/min [710000], rate=48464.16/min [720000], rate=48484.85/min [730000], rate=48451.33/min [740000], rate=48471.62/min [750000], rate=48596.11/min [760000], rate=48770.05/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.pul3AHkNpc/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.pul3AHkNpc/ctat_genome_lib_build_dir --filt_file /tmp/nxf.pul3AHkNpc/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.pul3AHkNpc/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -parsing /tmp/nxf.pul3AHkNpc/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info. 6000000.00 reads per min processed... 4000000.00 reads per min processed... 3600000.00 reads per min processed... 3000000.00 reads per min processed... 3000000.00 reads per min processed... 3272727.27 reads per min processed... 3230769.23 reads per min processed... 3000000.00 reads per min processed... 3000000.00 reads per min processed... 3000000.00 reads per min processed... 3000000.00 reads per min processed... 3000000.00 reads per min processed... 3120000.00 reads per min processed... 3230769.23 reads per min processed... 3333333.33 reads per min processed... 3310344.83 reads per min processed... 3400000.00 reads per min processed... 3375000.00 reads per min processed... 3352941.18 reads per min processed... 3428571.43 reads per min processed... done. * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.pul3AHkNpc/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.pul3AHkNpc/./star-fusion.preliminary/star-fusion -parsing fusion evidence: /tmp/nxf.pul3AHkNpc/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -outputting fusion candidates to file: /tmp/nxf.pul3AHkNpc/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.pul3AHkNpc/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.pul3AHkNpc/BVT_FFPE_TRNA_crv_01_A23WKFTLT4_1.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.pul3AHkNpc/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.pul3AHkNpc/./star-fusion.preliminary/star-fusion CMD: mkdir -p /tmp/nxf.pul3AHkNpc/./star-fusion.preliminary/star-fusion.filter.intermediates_dir EM: Starting log likelihood: -407698.045551 EM: Round [1] log likelihood: -407479.202245 EM: Round [2] log likelihood: -407448.268715 EM: Round [3] log likelihood: -407433.847724 EM: Round [4] log likelihood: -407426.168648 EM: Round [5] log likelihood: -407421.793495 EM: Round [6] log likelihood: -407419.162131 EM: Round [7] log likelihood: -407417.501010 EM: Round [8] log likelihood: -407416.404714 EM: Round [9] log likelihood: -407415.651211 EM: Round [10] log likelihood: -407415.114048 EM: Round [11] log likelihood: -407414.718520 EM: Round [12] log likelihood: -407414.418924 EM: Round [13] log likelihood: -407414.186359 EM: Round [14] log likelihood: -407414.001966 EM: Round [15] log likelihood: -407413.853073 EM: Round [16] log likelihood: -407413.730932 EM: Round [17] log likelihood: -407413.629352 EM: Round [18] log likelihood: -407413.543853 EM: Round [19] log likelihood: -407413.471128 EM: Round [20] log likelihood: -407413.408689 EM: Round [21] log likelihood: -407413.354636 EM: Round [22] log likelihood: -407413.307496 EM: Round [23] log likelihood: -407413.266113 EM: Round [24] log likelihood: -407413.229565 EM: Round [25] log likelihood: -407413.197115 EM: Round [26] log likelihood: -407413.168164 EM: Round [27] log likelihood: -407413.142220 EM: Round [28] log likelihood: -407413.118879 EM: Round [29] log likelihood: -407413.097803 EM: Round [30] log likelihood: -407413.078711 EM: Round [31] log likelihood: -407413.061363 EM: Round [32] log likelihood: -407413.045558 EM: Round [33] log likelihood: -407413.031122 EM: Round [34] log likelihood: -407413.017908 EM: Round [35] log likelihood: -407413.005785 EM: Round [36] log likelihood: -407412.994644 EM: Round [37] log likelihood: -407412.984387 EM: Round [38] log likelihood: -407412.974929 EM: Round [39] log likelihood: -407412.966193 EM: Round [40] log likelihood: -407412.958115 EM: Round [41] log likelihood: -407412.950636 EM: Round [42] log likelihood: -407412.943702 EM: Round [43] log likelihood: -407412.937268 EM: Round [44] log likelihood: -407412.931291 EM: Round [45] log likelihood: -407412.925733 EM: Round [46] log likelihood: -407412.920561 EM: Round [47] log likelihood: -407412.915744 EM: Round [48] log likelihood: -407412.911254 EM: Round [49] log likelihood: -407412.907066 EM: Round [50] log likelihood: -407412.903156 EM: Round [51] log likelihood: -407412.899505 EM: Round [52] log likelihood: -407412.896093 EM: Round [53] log likelihood: -407412.892901 EM: Round [54] log likelihood: -407412.889916 EM: Round [55] log likelihood: -407412.887121 EM: Round [56] log likelihood: -407412.884503 EM: Round [57] log likelihood: -407412.882050 EM: Round [58] log likelihood: -407412.879751 EM: Round [59] log likelihood: -407412.877594 EM: Round [60] log likelihood: -407412.875571 EM: Round [61] log likelihood: -407412.873671 EM: Round [62] log likelihood: -407412.871888 EM: Round [63] log likelihood: -407412.870213 EM: Round [64] log likelihood: -407412.868639 EM: Round [65] log likelihood: -407412.867159 EM: Round [66] log likelihood: -407412.865767 EM: Round [67] log likelihood: -407412.864458 EM: Round [68] log likelihood: -407412.863227 EM: Round [69] log likelihood: -407412.862067 EM: Round [70] log likelihood: -407412.860976 EM: Round [71] log likelihood: -407412.859948 EM: Round [72] log likelihood: -407412.858980 EM: Round [73] log likelihood: -407412.858068 EM: Round [74] log likelihood: -407412.857208 EM: Round [75] log likelihood: -407412.856397 EM: Round [76] log likelihood: -407412.855633 EM: Round [77] log likelihood: -407412.854912 EM: Round [78] log likelihood: -407412.854231 EM: Round [79] log likelihood: -407412.853589 EM: Round [80] log likelihood: -407412.852984 EM: Round [81] log likelihood: -407412.852412 EM: Round [82] log likelihood: -407412.851872 EM: Round [83] log likelihood: -407412.851361 EM: Round [84] log likelihood: -407412.850880 EM: Round [85] log likelihood: -407412.850424 EM: Round [86] log likelihood: -407412.849994 EM: Round [87] log likelihood: -407412.849588 EM: Round [88] log likelihood: -407412.849203 EM: Round [89] log likelihood: -407412.848840 EM: Round [90] log likelihood: -407412.848496 EM: Round [91] log likelihood: -407412.848171 EM: Round [92] log likelihood: -407412.847864 EM: Round [93] log likelihood: -407412.847573 EM: Round [94] log likelihood: -407412.847298 EM: Round [95] log likelihood: -407412.847038 EM: Round [96] log likelihood: -407412.846791 EM: Round [97] log likelihood: -407412.846558 EM: Round [98] log likelihood: -407412.846337 EM: Round [99] log likelihood: -407412.846128 EM: Round [100] log likelihood: -407412.845930 EM: Round [101] log likelihood: -407412.845742 EM: Round [102] log likelihood: -407412.845564 EM: Round [103] log likelihood: -407412.845396 EM: Round [104] log likelihood: -407412.845237 EM: Round [105] log likelihood: -407412.845086 EM: Round [106] log likelihood: -407412.844943 EM: Round [107] log likelihood: -407412.844807 EM: Round [108] log likelihood: -407412.844678 EM: Round [109] log likelihood: -407412.844556 EM: Round [110] log likelihood: -407412.844441 EM: Round [111] log likelihood: -407412.844331 EM: Round [112] log likelihood: -407412.844228 EM: Round [113] log likelihood: -407412.844129 EM: Stopping iterations at round 113 due to insufficient improvement in likelihood. EM: Starting log likelihood: -399000.699076 EM: Round [1] log likelihood: -398929.751870 EM: Round [2] log likelihood: -398903.403059 EM: Round [3] log likelihood: -398890.743316 EM: Round [4] log likelihood: -398884.024026 EM: Round [5] log likelihood: -398880.230523 EM: Round [6] log likelihood: -398877.979249 EM: Round [7] log likelihood: -398876.581401 EM: Round [8] log likelihood: -398875.675986 EM: Round [9] log likelihood: -398875.066002 EM: Round [10] log likelihood: -398874.639960 EM: Round [11] log likelihood: -398874.332564 EM: Round [12] log likelihood: -398874.104284 EM: Round [13] log likelihood: -398873.930414 EM: Round [14] log likelihood: -398873.795038 EM: Round [15] log likelihood: -398873.687602 EM: Round [16] log likelihood: -398873.600919 EM: Round [17] log likelihood: -398873.529970 EM: Round [18] log likelihood: -398873.471168 EM: Round [19] log likelihood: -398873.421898 EM: Round [20] log likelihood: -398873.380219 EM: Round [21] log likelihood: -398873.344660 EM: Round [22] log likelihood: -398873.314093 EM: Round [23] log likelihood: -398873.287642 EM: Round [24] log likelihood: -398873.264613 EM: Round [25] log likelihood: -398873.244456 EM: Round [26] log likelihood: -398873.226726 EM: Round [27] log likelihood: -398873.211062 EM: Round [28] log likelihood: -398873.197168 EM: Round [29] log likelihood: -398873.184798 EM: Round [30] log likelihood: -398873.173749 EM: Round [31] log likelihood: -398873.163849 EM: Round [32] log likelihood: -398873.154955 EM: Round [33] log likelihood: -398873.146943 EM: Round [34] log likelihood: -398873.139710 EM: Round [35] log likelihood: -398873.133165 EM: Round [36] log likelihood: -398873.127231 EM: Round [37] log likelihood: -398873.121842 EM: Round [38] log likelihood: -398873.116939 EM: Round [39] log likelihood: -398873.112471 EM: Round [40] log likelihood: -398873.108394 EM: Round [41] log likelihood: -398873.104669 EM: Round [42] log likelihood: -398873.101261 EM: Round [43] log likelihood: -398873.098140 EM: Round [44] log likelihood: -398873.095277 EM: Round [45] log likelihood: -398873.092651 EM: Round [46] log likelihood: -398873.090237 EM: Round [47] log likelihood: -398873.088018 EM: Round [48] log likelihood: -398873.085976 EM: Round [49] log likelihood: -398873.084096 EM: Round [50] log likelihood: -398873.082363 EM: Round [51] log likelihood: -398873.080764 EM: Round [52] log likelihood: -398873.079289 EM: Round [53] log likelihood: -398873.077927 EM: Round [54] log likelihood: -398873.076668 EM: Round [55] log likelihood: -398873.075504 EM: Round [56] log likelihood: -398873.074428 EM: Round [57] log likelihood: -398873.073432 EM: Round [58] log likelihood: -398873.072509 EM: Round [59] log likelihood: -398873.071654 EM: Round [60] log likelihood: -398873.070862 EM: Round [61] log likelihood: -398873.070127 EM: Round [62] log likelihood: -398873.069446 EM: Round [63] log likelihood: -398873.068813 EM: Round [64] log likelihood: -398873.068226 EM: Round [65] log likelihood: -398873.067680 EM: Round [66] log likelihood: -398873.067173 EM: Round [67] log likelihood: -398873.066701 EM: Round [68] log likelihood: -398873.066262 EM: Round [69] log likelihood: -398873.065854 EM: Round [70] log likelihood: -398873.065474 EM: Round [71] log likelihood: -398873.065120 EM: Round [72] log likelihood: -398873.064791 EM: Round [73] log likelihood: -398873.064483 EM: Round [74] log likelihood: -398873.064197 EM: Round [75] log likelihood: -398873.063930 EM: Round [76] log likelihood: -398873.063680 EM: Round [77] log likelihood: -398873.063448 EM: Round [78] log likelihood: -398873.063230 EM: Round [79] log likelihood: -398873.063027 EM: Round [80] log likelihood: -398873.062838 EM: Round [81] log likelihood: -398873.062660 EM: Round [82] log likelihood: -398873.062495 EM: Round [83] log likelihood: -398873.062339 EM: Round [84] log likelihood: -398873.062194 EM: Round [85] log likelihood: -398873.062058 EM: Round [86] log likelihood: -398873.061931 EM: Round [87] log likelihood: -398873.061812 EM: Round [88] log likelihood: -398873.061700 EM: Round [89] log likelihood: -398873.061595 EM: Round [90] log likelihood: -398873.061496 EM: Stopping iterations at round 90 due to insufficient improvement in likelihood. CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.pul3AHkNpc/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.pul3AHkNpc/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.pul3AHkNpc/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.pul3AHkNpc/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.pul3AHkNpc/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.pul3AHkNpc/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.pul3AHkNpc/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20 CMD: cp /tmp/nxf.pul3AHkNpc/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.pul3AHkNpc/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.pul3AHkNpc/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.pul3AHkNpc/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged CMD: ln -sf /tmp/nxf.pul3AHkNpc/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.pul3AHkNpc/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered * Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.pul3AHkNpc/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 83288794 > /tmp/nxf.pul3AHkNpc/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM * Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.pul3AHkNpc/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.pul3AHkNpc/ctat_genome_lib_build_dir > /tmp/nxf.pul3AHkNpc/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.pul3AHkNpc/ctat_genome_lib_build_dir --annotate /tmp/nxf.pul3AHkNpc/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.pul3AHkNpc/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot * Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.pul3AHkNpc/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.pul3AHkNpc/ctat_genome_lib_build_dir -done, see /tmp/nxf.pul3AHkNpc/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass * Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.pul3AHkNpc/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.pul3AHkNpc/ctat_genome_lib_build_dir -filter_likely_RT_artifacts: (pass: 2365, filtered: 10689) * Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.pul3AHkNpc/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001 * Running CMD: cp /tmp/nxf.pul3AHkNpc/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv * Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.pul3AHkNpc/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv WARNING, no entry stored in dbm for [ENSG00000243753.5] WARNING, no entry stored in dbm for [ENSG00000181126.13] WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [ENSG00000226049.3] WARNING, no entry stored in dbm for [ENSG00000260404.3] WARNING, no entry stored in dbm for [ENSG00000280136.2] WARNING, no entry stored in dbm for [ENSG00000227681.5] WARNING, no entry stored in dbm for [ENSG00000260727.2] WARNING, no entry stored in dbm for [ENSG00000276538.1] WARNING, no entry stored in dbm for [ENSG00000224016.2] WARNING, no entry stored in dbm for [ENSG00000274712.2] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000261722.1] WARNING, no entry stored in dbm for [ENSG00000205534.6] WARNING, no entry stored in dbm for [ENSG00000254485.5] WARNING, no entry stored in dbm for [ENSG00000272140.2] WARNING, no entry stored in dbm for [ENSG00000272848.2] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000280136.2] WARNING, no entry stored in dbm for [ENSG00000271699.5] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000234129.8] WARNING, no entry stored in dbm for [ENSG00000225594.1] WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000230559.1] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000257252.6] WARNING, no entry stored in dbm for [ENSG00000284977.2] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000287411.1] WARNING, no entry stored in dbm for [ENSG00000272655.2] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000251557.2] WARNING, no entry stored in dbm for [ENSG00000255052.5] WARNING, no entry stored in dbm for [ENSG00000254016.3] WARNING, no entry stored in dbm for [ENSG00000259404.5] WARNING, no entry stored in dbm for [ENSG00000259683.1] WARNING, no entry stored in dbm for [ENSG00000168405.17] WARNING, no entry stored in dbm for [ENSG00000284702.1] WARNING, no entry stored in dbm for [ENSG00000226383.7] WARNING, no entry stored in dbm for [ENSG00000235782.1] WARNING, no entry stored in dbm for [ENSG00000278771.1] WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000240405.7] WARNING, no entry stored in dbm for [ENSG00000230116.1] WARNING, no entry stored in dbm for [ENSG00000223508.5] WARNING, no entry stored in dbm for [ENSG00000231259.5] WARNING, no entry stored in dbm for [ENSG00000187953.10] WARNING, no entry stored in dbm for [ENSG00000225564.6] WARNING, no entry stored in dbm for [ENSG00000276758.1] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000278399.1] WARNING, no entry stored in dbm for [ENSG00000204622.11] WARNING, no entry stored in dbm for [ENSG00000235290.1] WARNING, no entry stored in dbm for [ENSG00000214433.4] WARNING, no entry stored in dbm for [ENSG00000244383.2] WARNING, no entry stored in dbm for [ENSG00000259755.1] WARNING, no entry stored in dbm for [ENSG00000227676.4] WARNING, no entry stored in dbm for [ENSG00000205534.6] WARNING, no entry stored in dbm for [ENSG00000230490.3] WARNING, no entry stored in dbm for [ENSG00000227486.2] WARNING, no entry stored in dbm for [ENSG00000226310.1] WARNING, no entry stored in dbm for [ENSG00000224016.2] WARNING, no entry stored in dbm for [ENSG00000251314.2] WARNING, no entry stored in dbm for [ENSG00000287129.1] WARNING, no entry stored in dbm for [ENSG00000231646.6] WARNING, no entry stored in dbm for [ENSG00000234129.8] WARNING, no entry stored in dbm for [ENSG00000272702.1] WARNING, no entry stored in dbm for [ENSG00000230189.7] WARNING, no entry stored in dbm for [ENSG00000244657.1] WARNING, no entry stored in dbm for [ENSG00000279070.2] WARNING, no entry stored in dbm for [ENSG00000241015.2] WARNING, no entry stored in dbm for [ENSG00000235197.1] WARNING, no entry stored in dbm for [ENSG00000268163.1] WARNING, no entry stored in dbm for [ENSG00000173209.23] WARNING, no entry stored in dbm for [ENSG00000277977.1] WARNING, no entry stored in dbm for [ENSG00000275374.1] WARNING, no entry stored in dbm for [ENSG00000230869.1] WARNING, no entry stored in dbm for [ENSG00000205534.6] WARNING, no entry stored in dbm for [ENSG00000196922.10] WARNING, no entry stored in dbm for [ENSG00000249167.2] WARNING, no entry stored in dbm for [ENSG00000196796.5] WARNING, no entry stored in dbm for [ENSG00000260702.3] WARNING, no entry stored in dbm for [ENSG00000256628.3] WARNING, no entry stored in dbm for [ENSG00000250802.7] WARNING, no entry stored in dbm for [ENSG00000261659.2] WARNING, no entry stored in dbm for [ENSG00000271142.1] WARNING, no entry 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WARNING, no entry stored in dbm for [ENSG00000224188.1] WARNING, no entry stored in dbm for [ENSG00000225022.1] WARNING, no entry stored in dbm for [ENSG00000258901.2] WARNING, no entry stored in dbm for [ENSG00000214076.3] WARNING, no entry stored in dbm for [ENSG00000198054.12] WARNING, no entry stored in dbm for [ENSG00000237529.2] WARNING, no entry stored in dbm for [ENSG00000245571.7] WARNING, no entry stored in dbm for [ENSG00000207007.1] WARNING, no entry stored in dbm for [ENSG00000206763.1] WARNING, no entry stored in dbm for [ENSG00000206635.1] WARNING, no entry stored in dbm for [ENSG00000222042.2] WARNING, no entry stored in dbm for [ENSG00000205583.13] WARNING, no entry stored in dbm for [ENSG00000180229.12] WARNING, no entry stored in dbm for [ENSG00000230606.11] WARNING, no entry stored in dbm for [ENSG00000285712.1] WARNING, no entry stored in dbm for [ENSG00000175147.13] WARNING, no entry stored in dbm for [ENSG00000263400.8] WARNING, no entry stored in dbm for [ENSG00000276077.4] WARNING, no entry stored in dbm for [ENSG00000214559.3] WARNING, no entry stored in dbm for [ENSG00000272140.2] WARNING, no entry stored in dbm for [ENSG00000106610.15] WARNING, no entry stored in dbm for [ENSG00000288035.1] WARNING, no entry stored in dbm for [ENSG00000242337.5] WARNING, no entry stored in dbm for [ENSG00000111788.10] WARNING, no entry stored in dbm for [ENSG00000125462.19] WARNING, no entry stored in dbm for [ENSG00000224597.10] WARNING, no entry stored in dbm for [ENSG00000222969.1] WARNING, no entry stored in dbm for [ENSG00000199622.1] WARNING, no entry stored in dbm for [ENSG00000199420.1] WARNING, no entry stored in dbm for [ENSG00000247708.8] WARNING, no entry stored in dbm for [ENSG00000276868.1] WARNING, no entry stored in dbm for [ENSG00000245498.7] WARNING, no entry stored in dbm for [ENSG00000237877.7] WARNING, no entry stored in dbm for [ENSG00000242294.6] WARNING, no entry stored in dbm for [ENSG00000242294.6] WARNING, no entry stored 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entry stored in dbm for [ENSG00000273609.1] WARNING, no entry stored in dbm for [ENSG00000247925.2] WARNING, no entry stored in dbm for [ENSG00000287920.1] WARNING, no entry stored in dbm for [ENSG00000205534.6] WARNING, no entry stored in dbm for [ENSG00000205534.6] WARNING, no entry stored in dbm for [ENSG00000237037.9] WARNING, no entry stored in dbm for [ENSG00000237037.9] WARNING, no entry stored in dbm for [ENSG00000215790.8] WARNING, no entry stored in dbm for [ENSG00000215790.8] WARNING, no entry stored in dbm for [ENSG00000213468.7] WARNING, no entry stored in dbm for [ENSG00000223959.8] WARNING, no entry stored in dbm for [ENSG00000223959.8] WARNING, no entry stored in dbm for [ENSG00000223959.8] WARNING, no entry stored in dbm for [ENSG00000223959.8] WARNING, no entry stored in dbm for [ENSG00000223959.8] WARNING, no entry stored in dbm for [ENSG00000223959.8] WARNING, no entry stored in dbm for [ENSG00000223959.8] WARNING, no entry stored in dbm for [ENSG00000230189.7] WARNING, no entry stored in dbm for [ENSG00000252316.1] WARNING, no entry stored in dbm for [ENSG00000241316.8] WARNING, no entry stored in dbm for [ENSG00000261556.10] WARNING, no entry stored in dbm for [ENSG00000286445.1] WARNING, no entry stored in dbm for [ENSG00000225953.3] WARNING, no entry stored in dbm for [ENSG00000287882.1] WARNING, no entry stored in dbm for [ENSG00000226995.9] WARNING, no entry stored in dbm for [ENSG00000241749.4] WARNING, no entry stored in dbm for [ENSG00000230116.1] WARNING, no entry stored in dbm for [ENSG00000240427.1] WARNING, no entry stored in dbm for [ENSG00000239438.1] WARNING, no entry stored in dbm for [ENSG00000261702.2] WARNING, no entry stored in dbm for [ENSG00000175886.10] WARNING, no entry stored in dbm for [ENSG00000241741.1] WARNING, no entry stored in dbm for [ENSG00000226448.1] WARNING, no entry stored in dbm for [ENSG00000218754.4] WARNING, no entry stored in dbm for [ENSG00000269514.3] WARNING, no entry stored in dbm for [ENSG00000206888.1] WARNING, no entry stored in dbm for [ENSG00000206975.1] WARNING, no entry stored in dbm for [ENSG00000201758.1] WARNING, no entry stored in dbm for [ENSG00000223202.1] WARNING, no entry stored in dbm for [ENSG00000237356.7] WARNING, no entry stored in dbm for [ENSG00000230556.1] WARNING, no entry stored in dbm for [ENSG00000268754.4] WARNING, no entry stored in dbm for [ENSG00000235137.2] WARNING, no entry stored in dbm for [ENSG00000261126.7] WARNING, no entry stored in dbm for [ENSG00000224687.2] WARNING, no entry stored in dbm for [ENSG00000254471.1] WARNING, no entry stored in dbm for [ENSG00000154608.14] WARNING, no entry stored in dbm for [ENSG00000230876.8] WARNING, no entry stored in dbm for [ENSG00000259511.3] WARNING, no entry stored in dbm for [ENSG00000269386.5] WARNING, no entry stored in dbm for [ENSG00000258603.4] WARNING, no entry stored in dbm for [ENSG00000249859.12] WARNING, no entry stored in dbm for [ENSG00000276672.1] WARNING, no entry stored in dbm for [ENSG00000253619.1] WARNING, no entry stored in dbm for [ENSG00000196796.5] WARNING, no entry stored in dbm for [ENSG00000175061.18] WARNING, no entry stored in dbm for [ENSG00000255967.1] WARNING, no entry stored in dbm for [ENSG00000220785.7] WARNING, no entry stored in dbm for [ENSG00000257621.8] WARNING, no entry stored in dbm for [ENSG00000271410.1] WARNING, no entry stored in dbm for [ENSG00000186481.16] WARNING, no entry stored in dbm for [ENSG00000279428.1] WARNING, no entry stored in dbm for [ENSG00000226476.6] WARNING, no entry stored in dbm for [ENSG00000286427.1] WARNING, no entry stored in dbm for [ENSG00000250332.1] WARNING, no entry stored in dbm for [ENSG00000249140.1] WARNING, no entry stored in dbm for [ENSG00000235431.2] WARNING, no entry stored in dbm for [ENSG00000240211.1] WARNING, no entry stored in dbm for [ENSG00000263934.5] WARNING, no entry stored in dbm for [ENSG00000235397.1] WARNING, no entry stored in dbm for [ENSG00000255401.1] WARNING, no entry stored in dbm for [ENSG00000250362.1] WARNING, no entry stored in dbm for [ENSG00000231074.9] WARNING, no entry stored in dbm for [ENSG00000240498.9] WARNING, no entry stored in dbm for [ENSG00000261441.1] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000244257.5] WARNING, no entry stored in dbm for [ENSG00000215908.10] WARNING, no entry stored in dbm for [ENSG00000275880.1] WARNING, no entry stored in dbm for [ENSG00000233246.1] WARNING, no entry stored in dbm for [ENSG00000199568.1] WARNING, no entry stored in dbm for [ENSG00000231583.1] WARNING, no entry stored in dbm for [ENSG00000229739.4] WARNING, no entry stored in dbm for [ENSG00000247774.7] WARNING, no entry stored in dbm for [ENSG00000272168.8] WARNING, no entry stored in dbm for [ENSG00000251259.1] WARNING, no entry stored in dbm for [ENSG00000285646.2] WARNING, no entry stored in dbm for [ENSG00000251520.1] WARNING, no entry stored in dbm for [ENSG00000106133.18] WARNING, no entry stored in dbm for [ENSG00000225377.6] WARNING, no entry stored in dbm for [ENSG00000230013.2] WARNING, no entry stored in dbm for [ENSG00000288075.1] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000215158.9] WARNING, no entry stored in dbm for [ENSG00000237187.9] WARNING, no entry stored in dbm for [ENSG00000287671.1] WARNING, no entry stored in dbm for [ENSG00000236859.7] WARNING, no entry stored in dbm for [ENSG00000239969.5] WARNING, no entry stored in dbm for [ENSG00000206337.12] WARNING, no entry stored in dbm for [ENSG00000237037.9] WARNING, no entry stored in dbm for [ENSG00000230445.4] WARNING, no entry stored in dbm for [ENSG00000254453.1] WARNING, no entry stored in dbm for [ENSG00000224600.5] WARNING, no entry stored in dbm for [ENSG00000229980.5] WARNING, no entry stored in dbm for [ENSG00000236051.7] WARNING, no entry stored in dbm for [ENSG00000237161.4] WARNING, no entry stored in dbm for [ENSG00000182873.5] WARNING, no entry stored in dbm for [ENSG00000197182.14] WARNING, no entry stored in dbm for [ENSG00000197182.14] WARNING, no entry stored in dbm for [ENSG00000283805.1] WARNING, no entry stored in dbm for [ENSG00000284485.1] WARNING, no entry stored in dbm for [ENSG00000237401.8] WARNING, no entry stored in dbm for [ENSG00000215417.13] WARNING, no entry stored in dbm for [ENSG00000283921.1] WARNING, no entry stored in dbm for [ENSG00000284332.1] WARNING, no entry stored in dbm for [ENSG00000233325.3] WARNING, no entry stored in dbm for [ENSG00000233325.3] WARNING, no entry stored in dbm for [ENSG00000228109.1] WARNING, no entry stored in dbm for [ENSG00000199568.1] WARNING, no entry stored in dbm for [ENSG00000261286.1] WARNING, no entry stored in dbm for [ENSG00000262528.2] WARNING, no entry stored in dbm for [ENSG00000287119.1] WARNING, no entry stored in dbm for [ENSG00000258204.1] WARNING, no entry stored in dbm for [ENSG00000263327.6] WARNING, no entry stored in dbm for [ENSG00000279196.1] WARNING, no entry stored in dbm for [ENSG00000264112.1] WARNING, no entry stored in dbm for [ENSG00000284747.1] WARNING, no entry stored in dbm for [ENSG00000228063.2] WARNING, no entry stored in dbm for [ENSG00000143429.10] WARNING, no entry stored in dbm for [ENSG00000166104.15] WARNING, no entry stored in dbm for [ENSG00000166104.15] WARNING, no entry stored in dbm for [ENSG00000236283.5] WARNING, no entry stored in dbm for [ENSG00000168992.4] WARNING, no entry stored in dbm for [ENSG00000280013.1] WARNING, no entry stored in dbm for [ENSG00000231566.2] WARNING, no entry stored in dbm for [ENSG00000251129.2] WARNING, no entry stored in dbm for [ENSG00000215241.4] WARNING, no entry stored in dbm for [ENSG00000259289.2] WARNING, no entry stored in dbm for [ENSG00000250490.1] WARNING, no entry stored in dbm for [ENSG00000223387.6] WARNING, no entry stored in dbm for [ENSG00000241383.2] WARNING, no entry stored in dbm for [ENSG00000267790.1] WARNING, no entry stored in dbm for [ENSG00000234928.1] WARNING, no entry stored in dbm for [ENSG00000227755.1] WARNING, no entry stored in dbm for [ENSG00000234323.8] WARNING, no entry stored in dbm for [ENSG00000236204.6] WARNING, no entry stored in dbm for [ENSG00000228262.10] WARNING, no entry stored in dbm for [ENSG00000203650.9] WARNING, no entry stored in dbm for [ENSG00000235437.8] WARNING, no entry stored in dbm for [ENSG00000233806.7] WARNING, no entry stored in dbm for [ENSG00000235703.6] WARNING, no entry stored in dbm for [ENSG00000241769.7] WARNING, no entry stored in dbm for [ENSG00000225269.3] WARNING, no entry stored in dbm for [ENSG00000215190.9] WARNING, no entry stored in dbm for [ENSG00000215190.9] WARNING, no entry stored in dbm for [ENSG00000275374.1] WARNING, no entry stored in dbm for [ENSG00000232677.9] WARNING, no entry stored in dbm for [ENSG00000233237.8] WARNING, no entry stored in dbm for [ENSG00000188185.13] WARNING, no entry stored in dbm for [ENSG00000275374.1] WARNING, no entry stored in dbm for [ENSG00000185485.14] WARNING, no entry stored in dbm for [ENSG00000265933.5] WARNING, no entry stored in dbm for [ENSG00000267374.2] WARNING, no entry stored in dbm for [ENSG00000233930.4] WARNING, no entry stored in dbm for [ENSG00000286948.1] WARNING, no entry stored in dbm for [ENSG00000214514.8] WARNING, no entry stored in dbm for [ENSG00000239569.3] WARNING, no entry stored in dbm for [ENSG00000199568.1] WARNING, no entry stored in dbm for [ENSG00000269845.1] WARNING, no entry stored in dbm for [ENSG00000286152.1] WARNING, no entry stored in dbm for [ENSG00000284669.1] WARNING, no entry stored in dbm for [ENSG00000224448.1] WARNING, no entry stored in dbm for [ENSG00000254319.6] WARNING, no entry stored in dbm for [ENSG00000257038.1] WARNING, no entry stored in dbm for [ENSG00000272767.1] WARNING, no entry stored in dbm for [ENSG00000228065.11] WARNING, no entry stored in dbm for [ENSG00000234336.7] WARNING, no entry stored in dbm for [ENSG00000264823.3] WARNING, no entry stored in dbm for [ENSG00000259673.6] WARNING, no entry stored in dbm for [ENSG00000254034.2] WARNING, no entry stored in dbm for [ENSG00000242337.5] WARNING, no entry stored in dbm for [ENSG00000200673.1] WARNING, no entry stored in dbm for [ENSG00000214182.5] WARNING, no entry stored in dbm for [ENSG00000213300.5] WARNING, no entry stored in dbm for [ENSG00000248977.1] WARNING, no entry stored in dbm for [ENSG00000236539.3] WARNING, no entry stored in dbm for [ENSG00000206228.4] WARNING, no entry stored in dbm for [ENSG00000236124.1] WARNING, no entry stored in dbm for [ENSG00000230459.3] WARNING, no entry stored in dbm for [ENSG00000199568.1] WARNING, no entry stored in dbm for [ENSG00000185837.3] WARNING, no entry stored in dbm for [ENSG00000220785.7] WARNING, no entry stored in dbm for [ENSG00000231607.13] WARNING, no entry stored in dbm for [ENSG00000226803.9] WARNING, no entry stored in dbm for [ENSG00000277053.4] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000224316.1] WARNING, no entry stored in dbm for [ENSG00000275833.1] WARNING, no entry stored in dbm for [ENSG00000258394.1] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000175676.15] WARNING, no entry stored in dbm for [ENSG00000229608.1] WARNING, no entry stored in dbm for [ENSG00000254717.2] WARNING, no entry stored in dbm for [ENSG00000214544.7] WARNING, no entry stored in dbm for [ENSG00000254349.6] WARNING, no entry stored in dbm for [ENSG00000270538.1] WARNING, no entry stored in dbm for [ENSG00000228948.2] WARNING, no entry stored in dbm for [ENSG00000249018.2] WARNING, no entry stored in dbm for [ENSG00000215483.11] WARNING, no entry stored in dbm for [ENSG00000215483.11] WARNING, no entry stored in dbm for [ENSG00000256448.5] WARNING, no entry stored in dbm for [ENSG00000180211.5] WARNING, no entry stored in dbm for [ENSG00000180211.5] WARNING, no entry stored in dbm for [ENSG00000258761.1] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000284523.2] WARNING, no entry stored in dbm for [ENSG00000250274.2] WARNING, no entry stored in dbm for [ENSG00000234119.1] WARNING, no entry stored in dbm for [ENSG00000285280.2] WARNING, no entry stored in dbm for [ENSG00000201801.1] WARNING, no entry stored in dbm for [ENSG00000263611.2] WARNING, no entry stored in dbm for [ENSG00000232445.2] WARNING, no entry stored in dbm for [ENSG00000257556.2] WARNING, no entry stored in dbm for [ENSG00000273247.5] WARNING, no entry stored in dbm for [ENSG00000234359.3] WARNING, no entry stored in dbm for [ENSG00000264714.1] WARNING, no entry stored in dbm for [ENSG00000231929.2] WARNING, no entry stored in dbm for [ENSG00000170089.15] WARNING, no entry stored in dbm for [ENSG00000236698.1] WARNING, no entry stored in dbm for [ENSG00000230239.1] WARNING, no entry stored in dbm for [ENSG00000268869.6] WARNING, no entry stored in dbm for [ENSG00000269929.3] WARNING, no entry stored in dbm for [ENSG00000249395.4] WARNING, no entry stored in dbm for [ENSG00000240499.7] WARNING, no entry stored in dbm for [ENSG00000272168.8] WARNING, no entry stored in dbm for [ENSG00000205790.1] WARNING, no entry stored in dbm for [ENSG00000287467.1] WARNING, no entry stored in dbm for [ENSG00000228206.2] WARNING, no entry stored in dbm for [ENSG00000277053.4] WARNING, no entry stored in dbm for [ENSG00000231607.13] WARNING, no entry stored in dbm for [ENSG00000224259.7] WARNING, no entry stored in dbm for [ENSG00000254275.6] WARNING, no entry stored in dbm for [ENSG00000267555.1] WARNING, no entry stored in dbm for [ENSG00000214439.4] WARNING, no entry stored in dbm for [ENSG00000273032.3] WARNING, no entry stored in dbm for [ENSG00000131002.12] WARNING, no entry stored in dbm for [ENSG00000203364.2] WARNING, no entry stored in dbm for [ENSG00000229180.7] WARNING, no entry stored in dbm for [ENSG00000279232.2] WARNING, no entry stored in dbm for [ENSG00000231890.8] WARNING, no entry stored in dbm for [ENSG00000226950.8] WARNING, no entry stored in dbm for [ENSG00000251381.8] WARNING, no entry stored in dbm for [ENSG00000222041.11] WARNING, no entry stored in dbm for [ENSG00000286458.1] WARNING, no entry stored in dbm for [ENSG00000278903.3] WARNING, no entry stored in dbm for [ENSG00000278903.3] WARNING, no entry stored in dbm for [ENSG00000278903.3] WARNING, no entry stored in dbm for [ENSG00000278903.3] WARNING, no entry stored in dbm for [ENSG00000278903.3] WARNING, no entry stored in dbm for [ENSG00000276077.4] WARNING, no entry stored in dbm for [ENSG00000276077.4] WARNING, no entry stored in dbm for [ENSG00000275120.3] WARNING, no entry stored in dbm for [ENSG00000225470.8] WARNING, no entry stored in dbm for [ENSG00000237773.7] WARNING, no entry stored in dbm for [ENSG00000225470.8] WARNING, no entry stored in dbm for [ENSG00000270533.2] WARNING, no entry stored in dbm for [ENSG00000260005.6] WARNING, no entry stored in dbm for [ENSG00000187952.9] WARNING, no entry stored in dbm for [ENSG00000254697.1] WARNING, no entry stored in dbm for [ENSG00000284618.1] WARNING, no entry stored in dbm for [ENSG00000262202.4] WARNING, no entry stored in dbm for [ENSG00000283541.1] WARNING, no entry stored in dbm for [ENSG00000283541.1] WARNING, no entry stored in dbm for [ENSG00000250778.1] WARNING, no entry stored in dbm for [ENSG00000168405.17] WARNING, no entry stored in dbm for [ENSG00000224078.15] WARNING, no entry stored in dbm for [ENSG00000255082.1] WARNING, no entry stored in dbm for [ENSG00000272800.3] WARNING, no entry stored in dbm for [ENSG00000259430.2] WARNING, no entry stored in dbm for [ENSG00000243970.3] WARNING, no entry stored in dbm for [ENSG00000259280.1] WARNING, no entry stored in dbm for [ENSG00000279711.1] WARNING, no entry stored in dbm for [ENSG00000286277.1] WARNING, no entry stored in dbm for [ENSG00000286277.1] WARNING, no entry stored in dbm for [ENSG00000215039.7] WARNING, no entry stored in dbm for [ENSG00000249392.1] WARNING, no entry stored in dbm for [ENSG00000249738.10] WARNING, no entry stored in dbm for [ENSG00000183666.17] WARNING, no entry stored in dbm for [ENSG00000188825.14] WARNING, no entry stored in dbm for [ENSG00000257746.2] WARNING, no entry stored in dbm for [ENSG00000287783.1] WARNING, no entry stored in dbm for [ENSG00000196796.5] WARNING, no entry stored in dbm for [ENSG00000287802.1] WARNING, no entry stored in dbm for [ENSG00000258599.2] WARNING, no entry stored in dbm for [ENSG00000173209.23] WARNING, no entry stored in dbm for [ENSG00000228933.8] WARNING, no entry stored in dbm for [ENSG00000272168.8] WARNING, no entry stored in dbm for [ENSG00000197989.14] WARNING, no entry stored in dbm for [ENSG00000266865.6] WARNING, no entry stored in dbm for [ENSG00000275088.1] WARNING, no entry stored in dbm for [ENSG00000285417.1] WARNING, no entry stored in dbm for [ENSG00000235991.4] WARNING, no entry stored in dbm for [ENSG00000228793.2] WARNING, no entry stored in dbm for [ENSG00000274461.2] WARNING, no entry stored in dbm for [ENSG00000274461.2] WARNING, no entry stored in dbm for [ENSG00000274461.2] WARNING, no entry stored in dbm for [ENSG00000264443.1] WARNING, no entry stored in dbm for [ENSG00000236459.1] WARNING, no entry stored in dbm for [ENSG00000240302.3] WARNING, no entry stored in dbm for [ENSG00000286156.1] WARNING, no entry stored in dbm for [ENSG00000204177.10] WARNING, no entry stored in dbm for [ENSG00000204177.10] WARNING, no entry stored in dbm for [ENSG00000204177.10] WARNING, no entry stored in dbm for [ENSG00000264538.6] WARNING, no entry stored in dbm for [ENSG00000266990.1] WARNING, no entry stored in dbm for [ENSG00000279022.1] WARNING, no entry stored in dbm for [ENSG00000261273.1] WARNING, no entry stored in dbm for [ENSG00000236064.2] WARNING, no entry stored in dbm for [ENSG00000269985.1] WARNING, no entry stored in dbm for [ENSG00000285219.2] WARNING, no entry stored in dbm for [ENSG00000228834.1] WARNING, no entry stored in dbm for [ENSG00000228335.1] WARNING, no entry stored in dbm for [ENSG00000257252.6] WARNING, no entry stored in dbm for [ENSG00000251022.6] WARNING, no entry stored in dbm for [ENSG00000177788.6] WARNING, no entry stored in dbm for [ENSG00000285106.2] WARNING, no entry stored in dbm for [ENSG00000229334.1] WARNING, no entry stored in dbm for [ENSG00000176043.5] WARNING, no entry stored in dbm for [ENSG00000186312.10] WARNING, no entry stored in dbm for [ENSG00000255191.1] WARNING, no entry stored in dbm for [ENSG00000224905.7] WARNING, no entry stored in dbm for [ENSG00000277599.1] WARNING, no entry stored in dbm for [ENSG00000233536.2] WARNING, no entry stored in dbm for [ENSG00000230212.6] WARNING, no entry stored in dbm for [ENSG00000226043.2] WARNING, no entry stored in dbm for [ENSG00000214121.4] WARNING, no entry stored in dbm for [ENSG00000215067.10] WARNING, no entry stored in dbm for [ENSG00000249456.1] WARNING, no entry stored in dbm for [ENSG00000287824.1] WARNING, no entry stored in dbm for [ENSG00000170161.7] WARNING, no entry stored in dbm for [ENSG00000231212.1] WARNING, no entry stored in dbm for [ENSG00000224251.6] WARNING, no entry stored in dbm for [ENSG00000226465.3] WARNING, no entry stored in dbm for [ENSG00000226465.3] WARNING, no entry stored in dbm for [ENSG00000282772.1] WARNING, no entry stored in dbm for [ENSG00000277577.1] WARNING, no entry stored in dbm for [ENSG00000285424.1] WARNING, no entry stored in dbm for [ENSG00000275741.1] WARNING, no entry stored in dbm for [ENSG00000233178.7] WARNING, no entry stored in dbm for [ENSG00000287077.1] WARNING, no entry stored in dbm for [ENSG00000217769.4] WARNING, no entry stored in dbm for [ENSG00000286116.1] WARNING, no entry stored in dbm for [ENSG00000244471.6] WARNING, no entry stored in dbm for [ENSG00000227240.2] WARNING, no entry stored in dbm for [ENSG00000271888.1] WARNING, no entry stored in dbm for [ENSG00000276805.2] WARNING, no entry stored in dbm for [ENSG00000235122.4] WARNING, no entry stored in dbm for [ENSG00000259977.1] WARNING, no entry stored in dbm for [ENSG00000286546.1] WARNING, no entry stored in dbm for [ENSG00000227486.2] WARNING, no entry stored in dbm for [ENSG00000269940.1] WARNING, no entry stored in dbm for [ENSG00000272173.1] WARNING, no entry stored in dbm for [ENSG00000236528.1] WARNING, no entry stored in dbm for [ENSG00000235008.1] WARNING, no entry stored in dbm for [ENSG00000215022.7] WARNING, no entry stored in dbm for [ENSG00000273353.1] WARNING, no entry stored in dbm for [ENSG00000259010.1] WARNING, no entry stored in dbm for [ENSG00000251520.1] WARNING, no entry stored in dbm for [ENSG00000230869.1] WARNING, no entry stored in dbm for [ENSG00000223959.8] WARNING, no entry stored in dbm for [ENSG00000224292.1] WARNING, no entry stored in dbm for [ENSG00000254936.4] WARNING, no entry stored in dbm for [ENSG00000224016.2] WARNING, no entry stored in dbm for [ENSG00000234715.2] WARNING, no entry stored in dbm for [ENSG00000222486.1] WARNING, no entry stored in dbm for [ENSG00000250320.6] WARNING, no entry stored in dbm for [ENSG00000250546.6] WARNING, no entry stored in dbm for [ENSG00000276216.1] WARNING, no entry stored in dbm for [ENSG00000237550.5] WARNING, no entry stored in dbm for [ENSG00000284964.1] WARNING, no entry stored in dbm for [ENSG00000281741.2] WARNING, no entry stored in dbm for [ENSG00000275121.1] WARNING, no entry stored in dbm for [ENSG00000214243.3] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000254701.3] WARNING, no entry stored in dbm for [ENSG00000254701.3] WARNING, no entry stored in dbm for [ENSG00000254701.3] WARNING, no entry stored in dbm for [ENSG00000233987.2] WARNING, no entry stored in dbm for [ENSG00000261273.1] WARNING, no entry stored in dbm for [ENSG00000229930.1] WARNING, no entry stored in dbm for [ENSG00000238035.8] WARNING, no entry stored in dbm for [ENSG00000287935.1] WARNING, no entry stored in dbm for [ENSG00000248994.2] WARNING, no entry stored in dbm for [ENSG00000248994.2] WARNING, no entry stored in dbm for [ENSG00000248994.2] WARNING, no entry stored in dbm for [ENSG00000248994.2] WARNING, no entry stored in dbm for [ENSG00000188002.10] WARNING, no entry stored in dbm for [ENSG00000253392.3] WARNING, no entry stored in dbm for [ENSG00000248468.2] WARNING, no entry stored in dbm for [ENSG00000264125.1] WARNING, no entry stored in dbm for [ENSG00000260037.5] WARNING, no entry stored in dbm for [ENSG00000285108.1] WARNING, no entry stored in dbm for [ENSG00000260236.1] WARNING, no entry stored in dbm for [ENSG00000236468.1] WARNING, no entry stored in dbm for [ENSG00000287676.1] WARNING, no entry stored in dbm for [ENSG00000286152.1] WARNING, no entry stored in dbm for [ENSG00000237838.1] WARNING, no entry stored in dbm for [ENSG00000284624.1] WARNING, no entry stored in dbm for [ENSG00000284605.1] WARNING, no entry stored in dbm for [ENSG00000276538.1] WARNING, no entry stored in dbm for [ENSG00000224016.2] WARNING, no entry stored in dbm for [ENSG00000261638.2] WARNING, no entry stored in dbm for [ENSG00000259418.1] WARNING, no entry stored in dbm for [ENSG00000284783.1] WARNING, no entry stored in dbm for [ENSG00000285035.1] WARNING, no entry stored in dbm for [ENSG00000263050.1] WARNING, no entry stored in dbm for [ENSG00000280828.1] WARNING, no entry stored in dbm for [ENSG00000260349.1] WARNING, no entry stored in dbm for [ENSG00000242140.1] WARNING, no entry stored in dbm for [ENSG00000257607.1] WARNING, no entry stored in dbm for [ENSG00000234129.8] WARNING, no entry stored in dbm for [ENSG00000250764.1] WARNING, no entry stored in dbm for [ENSG00000228334.2] WARNING, no entry stored in dbm for [ENSG00000255750.6] WARNING, no entry stored in dbm for [ENSG00000268093.1] WARNING, no entry stored in dbm for [ENSG00000272800.3] WARNING, no entry stored in dbm for [ENSG00000272800.3] WARNING, no entry stored in dbm for [ENSG00000229852.4] WARNING, no entry stored in dbm for [ENSG00000212978.6] WARNING, no entry stored in dbm for [ENSG00000223947.1] WARNING, no entry stored in dbm for [ENSG00000267422.1] WARNING, no entry stored in dbm for [ENSG00000286030.2] WARNING, no entry stored in dbm for [ENSG00000232386.9] WARNING, no entry stored in dbm for [ENSG00000232386.9] WARNING, no entry stored in dbm for [ENSG00000274184.1] WARNING, no entry stored in dbm for [ENSG00000204850.4] WARNING, no entry stored in dbm for [ENSG00000277977.1] WARNING, no entry stored in dbm for [ENSG00000228360.1] WARNING, no entry stored in dbm for [ENSG00000279100.1] WARNING, no entry stored in dbm for [ENSG00000264714.1] WARNING, no entry stored in dbm for [ENSG00000214331.8] WARNING, no entry stored in dbm for [ENSG00000214331.8] WARNING, no entry stored in dbm for [ENSG00000282807.3] WARNING, no entry stored in dbm for [ENSG00000233175.2] WARNING, no entry stored in dbm for [ENSG00000283041.1] WARNING, no entry stored in dbm for [ENSG00000229180.7] WARNING, no entry stored in dbm for [ENSG00000229180.7] WARNING, no entry stored in dbm for [ENSG00000262879.6] WARNING, no entry stored in dbm for [ENSG00000228421.2] WARNING, no entry stored in dbm for [ENSG00000214243.3] WARNING, no entry stored in dbm for [ENSG00000214243.3] WARNING, no entry stored in dbm for [ENSG00000205485.13] WARNING, no entry stored in dbm for [ENSG00000214243.3] WARNING, no entry stored in dbm for [ENSG00000205485.13] WARNING, no entry stored in dbm for [ENSG00000205485.13] WARNING, no entry stored in dbm for [ENSG00000205485.13] WARNING, no entry stored in dbm for [ENSG00000243554.1] WARNING, no entry stored in dbm for [ENSG00000238228.1] WARNING, no entry stored in dbm for [ENSG00000268163.1] WARNING, no entry stored in dbm for [ENSG00000251595.7] WARNING, no entry stored in dbm for [ENSG00000251595.7] * STAR-Fusion complete. See output: /tmp/nxf.pul3AHkNpc/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)