[W::hts_idx_load3] The index file is older than the data file: BVT_FFPE_TRNA_bst_02_A23WKFTLT4_1.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file:  ref_annot.bed  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	335764468
Known Splicing Events:	332681499
Partial Novel Splicing Events:	1456243
Novel Splicing Events:	1495429
Filtered Splicing Events:	131297

Total splicing  Junctions:	581705
Known Splicing Junctions:	268738
Partial Novel Splicing Junctions:	157179
Novel Splicing Junctions:	155788

===================================================================
Create BED file ...
Create Interact file ...