Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6e/cf07f52ddd8082a805e6451263d516/BVT_FFPE_TRNA_stm_06_A23WKFTLT4_2_1.fastp.fastq.gz Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/69/9c15ceb8b0f6456ce73355bf204def/.command.sh Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/69/9c15ceb8b0f6456ce73355bf204def/.command.run Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6e/cf07f52ddd8082a805e6451263d516/BVT_FFPE_TRNA_stm_06_A23WKFTLT4_2_2.fastp.fastq.gz Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/06/59577022190631b8e8498634cc6636/BVT_FFPE_TRNA_stm_06_A23WKFTLT4_2.Chimeric.out.junction ==> STAGING COMPLETE (6 inputs) -ctat genome lib [/tmp/nxf.m5bFFMSaGF/ctat_genome_lib_build_dir] validates. CMD: mkdir -p /tmp/nxf.m5bFFMSaGF/./_starF_checkpoints CMD: mkdir -p /tmp/nxf.m5bFFMSaGF/./star-fusion.preliminary -sample contains 246686357 rnaseq fragments * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.m5bFFMSaGF/ctat_genome_lib_build_dir -J /tmp/nxf.m5bFFMSaGF/BVT_FFPE_TRNA_stm_06_A23WKFTLT4_2.Chimeric.out.junction -O /tmp/nxf.m5bFFMSaGF/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 -parsing fusion evidence: /tmp/nxf.m5bFFMSaGF/BVT_FFPE_TRNA_stm_06_A23WKFTLT4_2.Chimeric.out.junction -building interval tree based on /tmp/nxf.m5bFFMSaGF/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.08 min). -mapping reads to genes [10000], rate=17647.06/min [20000], rate=12765.96/min [30000], rate=15789.47/min [40000], rate=17777.78/min [50000], rate=19230.77/min [60000], rate=16666.67/min [70000], rate=14946.62/min [80000], rate=13913.04/min [90000], rate=13075.06/min [100000], rate=13129.10/min [110000], rate=13953.49/min [120000], rate=14784.39/min [130000], rate=15600.00/min [140000], rate=16374.27/min [150000], rate=17142.86/min [160000], rate=17877.09/min [170000], rate=18647.17/min [180000], rate=19320.21/min [190000], rate=20000.00/min [200000], rate=20654.04/min [210000], rate=20895.52/min [220000], rate=21290.32/min [230000], rate=21939.59/min [240000], rate=22500.00/min [250000], rate=23076.92/min [260000], rate=23636.36/min [270000], rate=24179.10/min [280000], rate=24705.88/min [290000], rate=24892.70/min [300000], rate=24861.88/min [310000], rate=24766.98/min [320000], rate=24967.49/min [330000], rate=25126.90/min [340000], rate=25468.16/min [350000], rate=25957.97/min [360000], rate=26438.19/min [370000], rate=26909.09/min [380000], rate=27338.13/min [390000], rate=27824.02/min [400000], rate=28268.55/min [410000], rate=28738.32/min [420000], rate=29166.67/min [430000], rate=29587.16/min [440000], rate=29763.25/min [450000], rate=29834.25/min [460000], rate=30000.00/min [470000], rate=30225.08/min [480000], rate=30540.83/min [490000], rate=30753.14/min [500000], rate=31120.33/min [510000], rate=31546.39/min [520000], rate=31967.21/min [530000], rate=32218.84/min [540000], rate=32303.09/min [550000], rate=31822.57/min [560000], rate=31460.67/min [570000], rate=31491.71/min [580000], rate=30742.05/min [590000], rate=30543.57/min [600000], rate=30277.54/min [610000], rate=30348.26/min [620000], rate=30392.16/min [630000], rate=30483.87/min [640000], rate=30597.61/min [650000], rate=30660.38/min [660000], rate=30745.34/min [670000], rate=30828.22/min [680000], rate=30932.52/min [690000], rate=31034.48/min [700000], rate=31157.27/min [710000], rate=31254.59/min [720000], rate=31236.44/min [730000], rate=31196.58/min [740000], rate=31048.95/min [750000], rate=30864.20/min [760000], rate=30645.16/min [770000], rate=30515.19/min [780000], rate=30330.52/min [790000], rate=30287.54/min [800000], rate=30264.82/min [810000], rate=30280.37/min [820000], rate=30332.92/min [830000], rate=30496.02/min [840000], rate=30619.68/min [850000], rate=30778.52/min [860000], rate=30935.25/min [870000], rate=31071.43/min [880000], rate=31113.73/min [890000], rate=31264.64/min [900000], rate=31431.90/min [910000], rate=31615.52/min [920000], rate=31778.93/min [930000], rate=31958.76/min [940000], rate=32118.45/min [950000], rate=32294.62/min [960000], rate=32487.31/min [970000], rate=32678.27/min [980000], rate=32922.73/min [990000], rate=33128.83/min [1000000], rate=33333.33/min [1010000], rate=33536.25/min [1020000], rate=33700.44/min [1030000], rate=33715.22/min [1040000], rate=33729.73/min [1050000], rate=33780.16/min [1060000], rate=33811.80/min [1070000], rate=33789.47/min [1080000], rate=33750.00/min [1090000], rate=33659.29/min [1100000], rate=33367.04/min [1110000], rate=33035.71/min [1120000], rate=32860.64/min [1130000], rate=32690.45/min [1140000], rate=32524.96/min [1150000], rate=32348.80/min [1160000], rate=32207.31/min [1170000], rate=32098.77/min [1180000], rate=32255.13/min [1190000], rate=32425.07/min [1200000], rate=32579.19/min [1210000], rate=32732.19/min [1220000], rate=32898.88/min [1230000], rate=33064.52/min [1240000], rate=33229.12/min [1250000], rate=33407.57/min [1260000], rate=33600.00/min [1270000], rate=33776.60/min [1280000], rate=33952.25/min [1290000], rate=34126.98/min [1300000], rate=34285.71/min [1310000], rate=34443.47/min [1320000], rate=34676.01/min [1330000], rate=34847.16/min [1340000], rate=35063.24/min [1350000], rate=35309.50/min [1360000], rate=35509.14/min [1370000], rate=35661.61/min [1380000], rate=35859.68/min [1390000], rate=36010.36/min [1400000], rate=36144.58/min [1410000], rate=36309.01/min [1420000], rate=36488.22/min [1430000], rate=36729.45/min [1440000], rate=36923.08/min [1450000], rate=37037.04/min [1460000], rate=37197.45/min [1470000], rate=37436.33/min [1480000], rate=37579.35/min [1490000], rate=37817.26/min [1500000], rate=38022.81/min [1510000], rate=38147.37/min [1520000], rate=38238.99/min [1530000], rate=38458.32/min [1540000], rate=38693.47/min [1550000], rate=38895.86/min [1560000], rate=39016.26/min [1570000], rate=39152.12/min [1580000], rate=39303.48/min [1590000], rate=39421.49/min [1600000], rate=39555.01/min [1610000], rate=39720.39/min [1620000], rate=39950.68/min [1630000], rate=40081.97/min [1640000], rate=40261.87/min [1650000], rate=40391.68/min [1660000], rate=40487.80/min [1670000], rate=40583.23/min [1680000], rate=40727.27/min [1690000], rate=40854.15/min [1700000], rate=40980.31/min [1710000], rate=41122.24/min [1720000], rate=41263.49/min [1730000], rate=41437.13/min [1740000], rate=41577.06/min [1750000], rate=41732.91/min [1760000], rate=41805.23/min [1770000], rate=41893.49/min [1780000], rate=41964.64/min [1790000], rate=42068.16/min [1800000], rate=42187.50/min [1810000], rate=42289.72/min [1820000], rate=42374.85/min [1830000], rate=42459.40/min [1840000], rate=42543.35/min [1850000], rate=42675.89/min [1860000], rate=42775.01/min [1870000], rate=42857.14/min [1880000], rate=42987.80/min [1890000], rate=43085.11/min [1900000], rate=43198.18/min [1910000], rate=43310.66/min [1920000], rate=43357.17/min [1930000], rate=43468.47/min [1940000], rate=43562.87/min [1950000], rate=43624.16/min [1960000], rate=43717.47/min [1970000], rate=43842.73/min [1980000], rate=43951.17/min [1990000], rate=44075.30/min [2000000], rate=44198.90/min [2010000], rate=44046.75/min [2020000], rate=43738.72/min [2030000], rate=43500.00/min [2040000], rate=43296.78/min [2050000], rate=42842.22/min [2060000], rate=42372.30/min [2070000], rate=42230.53/min [2080000], rate=42176.41/min [2090000], rate=42024.13/min [2100000], rate=41888.30/min [2110000], rate=41740.85/min [2120000], rate=41582.22/min [2130000], rate=41399.42/min [2140000], rate=41206.68/min [2150000], rate=41004.45/min [2160000], rate=40844.63/min [2170000], rate=40751.17/min [2180000], rate=40646.36/min [2190000], rate=40555.56/min [2200000], rate=40478.38/min [2210000], rate=40463.84/min [2220000], rate=40412.62/min [2230000], rate=40422.96/min [2240000], rate=40433.21/min [2250000], rate=40443.38/min [2260000], rate=40465.53/min [2270000], rate=40499.55/min [2280000], rate=40533.33/min [2290000], rate=40566.87/min [2300000], rate=40624.08/min [2310000], rate=40680.95/min [2320000], rate=40749.41/min [2330000], rate=40829.44/min [2340000], rate=40909.09/min [2350000], rate=41012.22/min [2360000], rate=41103.05/min [2370000], rate=41229.34/min [2380000], rate=41343.37/min [2390000], rate=41481.05/min [2400000], rate=41594.45/min [2410000], rate=41719.56/min [2420000], rate=41832.32/min [2430000], rate=41944.76/min [2440000], rate=42117.38/min [2450000], rate=42229.24/min [2460000], rate=42340.79/min [2470000], rate=42464.18/min [2480000], rate=42575.11/min [2490000], rate=42649.16/min [2500000], rate=42517.01/min [2510000], rate=42386.72/min [2520000], rate=42258.24/min [2530000], rate=42166.67/min [2540000], rate=42099.45/min [2550000], rate=42056.07/min [2560000], rate=42024.62/min [2570000], rate=42004.90/min [2580000], rate=41985.35/min [2590000], rate=42000.00/min [2600000], rate=42014.54/min [2610000], rate=42028.99/min [2620000], rate=42054.57/min [2630000], rate=42080.00/min [2640000], rate=42127.66/min [2650000], rate=42186.26/min [2660000], rate=42255.76/min [2670000], rate=42347.34/min [2680000], rate=42427.44/min [2690000], rate=42507.24/min [2700000], rate=42597.95/min [2710000], rate=42587.74/min -building interval tree based on /tmp/nxf.m5bFFMSaGF/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.10 min). -mapping reads to genes [10000], rate=26086.96/min [20000], rate=33333.33/min [30000], rate=37500.00/min [40000], rate=34285.71/min [50000], rate=31914.89/min [60000], rate=30252.10/min [70000], rate=29370.63/min [80000], rate=31372.55/min [90000], rate=33333.33/min [100000], rate=35502.96/min [110000], rate=37288.14/min [120000], rate=38709.68/min [130000], rate=40625.00/min [140000], rate=42211.06/min [150000], rate=43689.32/min [160000], rate=41921.40/min [170000], rate=40476.19/min [180000], rate=39416.06/min [190000], rate=38255.03/min [200000], rate=37500.00/min [210000], rate=36842.11/min [220000], rate=36363.64/min [230000], rate=36031.33/min [240000], rate=35643.56/min [250000], rate=35545.02/min [260000], rate=35535.31/min [270000], rate=35604.40/min [280000], rate=35744.68/min [290000], rate=33526.01/min [300000], rate=31914.89/min [310000], rate=30392.16/min [320000], rate=30331.75/min [330000], rate=30461.54/min [340000], rate=30630.63/min [350000], rate=30791.79/min [360000], rate=31079.14/min [370000], rate=31267.61/min [380000], rate=30810.81/min [390000], rate=30232.56/min [400000], rate=29161.60/min [410000], rate=28571.43/min [420000], rate=28410.37/min [430000], rate=28445.42/min [440000], rate=28295.82/min [450000], rate=28272.25/min [460000], rate=28307.69/min [470000], rate=28059.70/min [480000], rate=28207.64/min [490000], rate=28269.23/min [500000], rate=28436.02/min [510000], rate=28518.17/min [520000], rate=28519.20/min [530000], rate=28418.23/min [540000], rate=28247.60/min [550000], rate=28013.58/min [560000], rate=27722.77/min [570000], rate=27872.86/min [580000], rate=28109.85/min [590000], rate=28342.67/min [600000], rate=28616.85/min [610000], rate=28909.95/min [620000], rate=29176.47/min [630000], rate=29531.25/min [640000], rate=29860.03/min [650000], rate=30139.10/min [660000], rate=30438.12/min [670000], rate=30733.94/min [680000], rate=31026.62/min [690000], rate=31339.89/min [700000], rate=31650.34/min [710000], rate=31957.99/min [720000], rate=32071.27/min [730000], rate=31831.40/min [740000], rate=31267.61/min [750000], rate=30425.96/min [760000], rate=29901.64/min [770000], rate=29370.63/min [780000], rate=29378.53/min [790000], rate=29386.24/min [800000], rate=29375.76/min [810000], rate=29365.56/min [820000], rate=29408.25/min [830000], rate=29484.90/min [840000], rate=29183.56/min [850000], rate=29176.20/min [860000], rate=29284.90/min [870000], rate=29441.62/min [880000], rate=29546.73/min [890000], rate=29535.40/min [900000], rate=29268.29/min [910000], rate=29011.69/min [920000], rate=28825.07/min [930000], rate=28762.89/min [940000], rate=28673.11/min [950000], rate=28542.81/min [960000], rate=28585.61/min [970000], rate=28698.22/min [980000], rate=28851.82/min [990000], rate=29018.08/min [1000000], rate=28999.52/min [1010000], rate=29064.75/min [1020000], rate=29226.36/min [1030000], rate=29372.62/min [1040000], rate=29350.89/min [1050000], rate=29275.09/min [1060000], rate=29120.88/min [1070000], rate=29128.86/min [1080000], rate=29268.29/min [1090000], rate=29432.94/min [1100000], rate=29583.15/min [1110000], rate=29732.14/min [1120000], rate=29879.95/min [1130000], rate=30053.19/min [1140000], rate=30265.49/min [1150000], rate=30463.58/min [1160000], rate=30647.29/min [1170000], rate=30843.59/min [1180000], rate=31039.02/min [1190000], rate=31233.60/min [1200000], rate=31427.32/min [1210000], rate=31606.44/min [1220000], rate=31784.63/min [1230000], rate=31975.74/min [1240000], rate=32166.02/min [1250000], rate=32327.59/min [1260000], rate=32321.50/min [1270000], rate=32315.52/min [1280000], rate=32282.47/min [1290000], rate=32303.84/min [1300000], rate=32204.79/min [1310000], rate=32173.56/min [1320000], rate=32116.79/min [1330000], rate=32073.95/min [1340000], rate=32044.64/min [1350000], rate=32053.82/min [1360000], rate=32050.27/min [1370000], rate=32059.28/min [1380000], rate=32155.34/min [1390000], rate=32275.54/min [1400000], rate=32444.96/min [1410000], rate=32476.01/min [1420000], rate=32494.28/min [1430000], rate=32487.69/min [1440000], rate=32505.64/min [1450000], rate=32547.70/min [1460000], rate=32565.06/min [1470000], rate=32426.47/min [1480000], rate=32491.77/min [1490000], rate=32274.37/min [1500000], rate=32017.08/min [1510000], rate=31711.59/min [1520000], rate=31491.71/min [1530000], rate=31299.01/min [1540000], rate=31343.28/min [1550000], rate=31408.31/min [1560000], rate=31483.35/min [1570000], rate=31568.36/min [1580000], rate=31652.75/min [1590000], rate=31736.53/min [1600000], rate=31851.36/min [1610000], rate=31944.44/min [1620000], rate=32047.48/min [1630000], rate=32160.47/min [1640000], rate=32272.88/min [1650000], rate=32395.29/min [1660000], rate=32517.14/min [1670000], rate=32479.74/min [1680000], rate=32411.58/min [1690000], rate=32489.59/min [1700000], rate=32650.45/min [1710000], rate=32800.51/min [1720000], rate=32971.25/min [1730000], rate=33131.18/min [1740000], rate=33280.20/min [1750000], rate=33439.49/min [1760000], rate=33598.47/min [1770000], rate=33757.15/min [1780000], rate=33915.53/min [1790000], rate=34084.42/min [1800000], rate=34231.38/min [1810000], rate=34377.97/min [1820000], rate=34535.10/min [1830000], rate=34680.99/min [1840000], rate=34848.48/min [1850000], rate=35015.77/min [1860000], rate=35171.76/min [1870000], rate=35305.22/min [1880000], rate=35460.55/min [1890000], rate=35615.58/min [1900000], rate=35759.10/min [1910000], rate=35924.76/min [1920000], rate=36078.92/min [1930000], rate=36221.46/min [1940000], rate=36363.64/min [1950000], rate=36516.85/min [1960000], rate=36669.78/min [1970000], rate=36822.43/min [1980000], rate=36986.30/min [1990000], rate=37138.41/min [2000000], rate=37278.66/min [2010000], rate=37418.55/min [2020000], rate=37569.75/min [2030000], rate=37708.98/min [2040000], rate=37836.17/min [2050000], rate=37951.25/min [2060000], rate=38077.63/min [2070000], rate=38191.88/min [2080000], rate=38305.71/min [2090000], rate=38360.35/min [2100000], rate=38473.28/min [2110000], rate=38515.36/min [2120000], rate=38475.50/min [2130000], rate=38459.22/min [2140000], rate=38477.67/min [2150000], rate=38473.01/min [2160000], rate=38491.24/min [2170000], rate=38497.93/min [2180000], rate=38538.60/min [2190000], rate=38601.65/min [2200000], rate=38630.38/min [2210000], rate=38658.89/min [2220000], rate=38709.68/min [2230000], rate=38771.37/min [2240000], rate=38832.71/min [2250000], rate=38904.90/min [2260000], rate=38965.52/min [2270000], rate=39025.79/min [2280000], rate=39096.88/min [2290000], rate=39167.62/min [2300000], rate=39249.15/min [2310000], rate=39319.15/min [2320000], rate=39399.94/min [2330000], rate=39480.37/min [2340000], rate=39571.59/min [2350000], rate=39684.77/min [2360000], rate=39842.43/min [2370000], rate=39943.82/min [2380000], rate=40033.64/min [2390000], rate=40123.11/min [2400000], rate=40212.23/min [2410000], rate=40301.00/min [2420000], rate=40389.43/min [2430000], rate=40488.75/min [2440000], rate=40576.50/min [2450000], rate=40675.15/min [2460000], rate=40773.48/min [2470000], rate=40770.29/min [2480000], rate=40733.64/min [2490000], rate=40730.64/min [2500000], rate=40727.67/min [2510000], rate=40735.73/min [2520000], rate=40798.70/min [2530000], rate=40828.40/min [2540000], rate=40846.96/min [2550000], rate=40854.47/min [2560000], rate=40883.68/min [2570000], rate=40923.57/min [2580000], rate=40995.76/min [2590000], rate=41056.80/min [2600000], rate=41128.39/min [2610000], rate=41199.68/min [2620000], rate=41259.84/min [2630000], rate=41341.37/min [2640000], rate=41411.76/min [2650000], rate=41492.69/min [2660000], rate=41573.33/min [2670000], rate=41653.67/min [2680000], rate=41744.55/min [2690000], rate=41824.31/min [2700000], rate=41947.18/min [2710000], rate=42058.98/min [2720000], rate=42148.76/min [2730000], rate=42238.27/min [2740000], rate=42327.50/min [2750000], rate=42416.45/min [2760000], rate=42516.05/min [2770000], rate=42593.54/min [2720000], rate=42533.23/min [2730000], rate=42501.30/min [2740000], rate=42491.60/min [2750000], rate=42492.92/min [2760000], rate=42483.32/min [2770000], rate=42495.53/min -building interval tree based on /tmp/nxf.m5bFFMSaGF/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.08 min). -mapping reads to genes [10000], rate=21428.57/min [20000], rate=21818.18/min [30000], rate=27272.73/min [40000], rate=28571.43/min [50000], rate=31250.00/min [60000], rate=34285.71/min [70000], rate=36842.11/min [80000], rate=39024.39/min [90000], rate=41221.37/min [100000], rate=42857.14/min [110000], rate=43708.61/min [120000], rate=41379.31/min [130000], rate=40414.51/min [140000], rate=39810.43/min [150000], rate=39301.31/min [160000], rate=39024.39/min [170000], rate=39080.46/min [180000], rate=39272.73/min [190000], rate=39583.33/min [200000], rate=39735.10/min [210000], rate=38066.47/min [220000], rate=36363.64/min [230000], rate=34936.71/min [240000], rate=35467.98/min [250000], rate=36231.88/min [260000], rate=36966.82/min [270000], rate=36651.58/min [280000], rate=35897.44/min [290000], rate=35437.88/min [300000], rate=34951.46/min [310000], rate=34572.49/min [320000], rate=34163.70/min [330000], rate=34736.84/min [340000], rate=35355.29/min [350000], rate=35958.90/min [360000], rate=36120.40/min [370000], rate=35864.30/min [380000], rate=36480.00/min [390000], rate=37025.32/min [400000], rate=36697.25/min [410000], rate=36498.52/min [420000], rate=36363.64/min [430000], rate=36647.73/min [440000], rate=37446.81/min [450000], rate=38297.87/min [460000], rate=39093.48/min [470000], rate=39943.34/min [480000], rate=40793.20/min [490000], rate=41643.06/min [500000], rate=42432.81/min [510000], rate=43159.38/min [520000], rate=43697.48/min [530000], rate=44351.46/min [540000], rate=44505.49/min [550000], rate=45205.48/min [560000], rate=45964.43/min [570000], rate=46657.57/min [580000], rate=47218.45/min [590000], rate=47773.28/min [600000], rate=48517.52/min [610000], rate=49326.15/min [620000], rate=50134.77/min [630000], rate=50806.45/min [640000], rate=51200.00/min [650000], rate=51181.10/min [660000], rate=50899.74/min [670000], rate=51145.04/min [680000], rate=50495.05/min [690000], rate=48994.08/min [700000], rate=47781.57/min [710000], rate=46405.23/min [720000], rate=45908.61/min [730000], rate=45247.93/min [740000], rate=45121.95/min [750000], rate=44422.51/min [760000], rate=43469.97/min [770000], rate=42580.65/min [780000], rate=42314.65/min [790000], rate=42208.37/min [800000], rate=41958.04/min [810000], rate=41716.74/min [820000], rate=41872.34/min [830000], rate=42060.81/min [840000], rate=42246.44/min [850000], rate=42500.00/min [860000], rate=42679.90/min [870000], rate=42927.63/min [880000], rate=43172.53/min [890000], rate=43485.34/min [900000], rate=43724.70/min [910000], rate=43961.35/min [920000], rate=44230.77/min [930000], rate=43867.92/min [940000], rate=43552.12/min [950000], rate=42696.63/min [960000], rate=41290.32/min [970000], rate=39917.70/min [980000], rate=38735.18/min [990000], rate=37762.24/min [1000000], rate=37313.43/min [1010000], rate=36838.91/min [1020000], rate=36978.85/min [1030000], rate=36676.56/min [1040000], rate=36662.75/min [1050000], rate=36627.91/min [1060000], rate=36551.72/min [1070000], rate=36560.36/min [1080000], rate=36610.17/min [1090000], rate=36454.85/min [1100000], rate=36524.63/min [1110000], rate=36573.31/min [1120000], rate=36621.25/min [1130000], rate=36728.06/min [1140000], rate=36813.78/min [1150000], rate=36858.97/min [1160000], rate=36923.08/min [1170000], rate=36947.37/min [1180000], rate=37029.29/min [1190000], rate=37110.19/min [1200000], rate=37170.88/min [1210000], rate=37249.87/min [1220000], rate=37195.12/min [1230000], rate=37029.60/min [1240000], rate=36813.46/min [1250000], rate=36425.45/min [1260000], rate=36258.99/min [1270000], rate=35994.33/min [1280000], rate=35754.19/min [1290000], rate=35537.19/min [1300000], rate=35310.10/min [1310000], rate=35325.84/min [1320000], rate=35341.37/min [1330000], rate=35294.12/min [1340000], rate=35078.53/min [1350000], rate=35034.60/min [1360000], rate=34931.51/min [1370000], rate=34581.41/min [1380000], rate=34285.71/min [1390000], rate=34222.40/min [1400000], rate=34313.73/min [1410000], rate=34418.23/min [1420000], rate=34507.90/min [1430000], rate=34610.73/min [1440000], rate=34740.65/min [1450000], rate=34855.77/min [1460000], rate=34970.06/min [1470000], rate=35069.58/min [1480000], rate=35196.20/min [1490000], rate=35322.01/min [1500000], rate=35474.97/min [1510000], rate=35613.21/min [1520000], rate=35750.69/min [1530000], rate=35901.45/min [1540000], rate=36037.44/min [1550000], rate=36214.95/min [1560000], rate=36363.64/min [1570000], rate=36511.63/min [1580000], rate=36658.93/min [1590000], rate=36805.56/min [1600000], rate=36937.28/min [1610000], rate=37039.88/min [1620000], rate=36930.09/min [1630000], rate=36656.67/min [1640000], rate=36430.95/min [1650000], rate=35649.98/min [1660000], rate=35533.36/min [1670000], rate=35443.93/min [1680000], rate=35331.23/min [1690000], rate=35306.41/min [1700000], rate=35245.34/min [1710000], rate=35209.33/min [1720000], rate=35197.82/min [1730000], rate=35186.44/min [1740000], rate=35163.35/min [1750000], rate=35140.56/min [1760000], rate=35129.74/min [1770000], rate=35130.66/min [1780000], rate=35131.58/min [1790000], rate=35132.48/min [1800000], rate=35156.25/min [1810000], rate=35202.59/min [1820000], rate=35259.93/min [1830000], rate=35305.47/min [1840000], rate=35316.70/min [1850000], rate=35350.32/min [1860000], rate=35394.86/min [1870000], rate=35416.67/min [1880000], rate=35471.70/min [1890000], rate=35492.96/min [1900000], rate=35525.09/min [1910000], rate=35567.97/min [1920000], rate=35621.52/min [1930000], rate=35663.69/min [1940000], rate=35738.41/min [1950000], rate=35747.02/min [1960000], rate=35799.09/min [1970000], rate=35861.65/min [1980000], rate=35923.80/min [1990000], rate=35748.50/min [2000000], rate=35842.29/min [2010000], rate=35924.93/min [2020000], rate=36007.13/min [2030000], rate=36099.59/min [2040000], rate=36159.53/min [2050000], rate=36240.42/min [2060000], rate=36288.90/min [2070000], rate=36337.04/min [2080000], rate=36395.45/min [2090000], rate=36442.89/min [2100000], rate=36511.16/min [2110000], rate=36568.46/min [2120000], rate=36625.40/min [2130000], rate=36671.45/min [2140000], rate=36738.20/min [2150000], rate=36804.56/min [2160000], rate=36870.55/min [2170000], rate=36925.69/min [2180000], rate=36990.95/min [2190000], rate=37045.39/min [2200000], rate=37089.07/min [2210000], rate=37111.67/min [2220000], rate=37165.18/min [2230000], rate=37187.33/min [2240000], rate=37209.30/min [2250000], rate=37251.66/min [2260000], rate=37303.99/min [2270000], rate=37366.26/min [2280000], rate=37428.18/min [2290000], rate=37489.77/min [2300000], rate=37561.24/min [2310000], rate=37642.59/min [2320000], rate=37723.58/min [2330000], rate=37804.22/min [2340000], rate=37894.74/min [2350000], rate=37974.68/min [2360000], rate=38064.52/min [2370000], rate=38164.25/min [2380000], rate=38263.67/min [2390000], rate=38352.50/min [2400000], rate=38451.27/min [2410000], rate=38539.45/min [2420000], rate=38627.29/min [2430000], rate=38714.82/min [2440000], rate=38802.01/min [2450000], rate=38899.18/min [2460000], rate=38975.44/min [2470000], rate=39082.28/min [2480000], rate=39178.52/min [2490000], rate=39315.79/min [2500000], rate=39411.46/min [2510000], rate=39506.82/min [2520000], rate=39591.52/min [2530000], rate=39686.27/min [2540000], rate=39770.35/min [2550000], rate=39864.51/min [2560000], rate=39958.38/min [2570000], rate=39906.83/min [2580000], rate=39784.12/min [2590000], rate=39652.97/min [2600000], rate=39563.78/min [2610000], rate=39515.52/min [2620000], rate=39457.83/min [2630000], rate=39420.43/min [2640000], rate=39344.26/min [2650000], rate=39298.07/min [2660000], rate=39281.32/min [2670000], rate=39274.33/min [2680000], rate=39267.40/min [2690000], rate=39250.97/min [2700000], rate=39225.18/min [2710000], rate=39227.99/min [2720000], rate=39211.92/min [2730000], rate=39233.53/min [2740000], rate=39236.28/min [2750000], rate=39267.02/min -building interval tree based on /tmp/nxf.m5bFFMSaGF/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.08 min). -mapping reads to genes [10000], rate=100000.00/min [20000], rate=100000.00/min [30000], rate=112500.00/min [40000], rate=82758.62/min [50000], rate=71428.57/min [60000], rate=67924.53/min [70000], rate=79245.28/min [80000], rate=76190.48/min [90000], rate=72972.97/min [100000], rate=80000.00/min [110000], rate=88000.00/min [120000], rate=85714.29/min [130000], rate=87640.45/min [140000], rate=90322.58/min [150000], rate=90000.00/min [160000], rate=91428.57/min [170000], rate=91891.89/min [180000], rate=97297.30/min [190000], rate=100000.00/min [200000], rate=100840.34/min [210000], rate=105000.00/min [220000], rate=110000.00/min [230000], rate=103759.40/min [240000], rate=98630.14/min [250000], rate=94936.71/min [260000], rate=95705.52/min [270000], rate=96428.57/min [280000], rate=97674.42/min [290000], rate=97752.81/min [300000], rate=101123.60/min [310000], rate=102197.80/min [320000], rate=103225.81/min [330000], rate=104210.53/min [340000], rate=104615.38/min [350000], rate=104477.61/min [360000], rate=105365.85/min [370000], rate=105213.27/min [380000], rate=106046.51/min [390000], rate=106363.64/min [400000], rate=107623.32/min [410000], rate=106956.52/min [420000], rate=106329.11/min [430000], rate=88965.52/min [440000], rate=67519.18/min [450000], rate=53892.22/min [460000], rate=46153.85/min [470000], rate=39943.34/min [480000], rate=36970.47/min [490000], rate=34106.73/min [500000], rate=32786.89/min [510000], rate=30784.71/min [520000], rate=29213.48/min [530000], rate=27748.69/min [540000], rate=26821.19/min [550000], rate=26190.48/min [560000], rate=25416.04/min [570000], rate=24854.65/min [580000], rate=24267.78/min [590000], rate=23663.10/min [600000], rate=22784.81/min [610000], rate=22481.57/min [620000], rate=22288.80/min [630000], rate=22040.82/min [640000], rate=21793.42/min [650000], rate=21654.64/min [660000], rate=21568.63/min [670000], rate=21508.83/min [680000], rate=21428.57/min [690000], rate=21329.21/min [700000], rate=21255.06/min [710000], rate=21183.49/min [720000], rate=21114.37/min [730000], rate=20650.64/min [740000], rate=20517.56/min [750000], rate=20566.73/min [760000], rate=20586.91/min [770000], rate=20478.72/min [780000], rate=20463.49/min [790000], rate=20510.60/min [800000], rate=20442.93/min [810000], rate=20506.33/min [820000], rate=20568.56/min [830000], rate=20646.77/min [840000], rate=20715.17/min [850000], rate=20824.83/min [860000], rate=20941.56/min [870000], rate=21065.38/min [880000], rate=21162.32/min [890000], rate=21207.31/min [900000], rate=21118.50/min [910000], rate=21105.53/min [920000], rate=21165.64/min [930000], rate=21249.05/min [940000], rate=21323.25/min [950000], rate=21420.52/min [960000], rate=21508.59/min [970000], rate=21619.61/min [980000], rate=21705.43/min [990000], rate=21806.17/min [1000000], rate=21873.86/min [1010000], rate=21972.44/min [1020000], rate=22069.96/min [1030000], rate=22174.38/min [1040000], rate=22269.81/min [1050000], rate=22380.11/min [1060000], rate=22497.35/min [1070000], rate=22621.56/min [1080000], rate=22736.84/min [1090000], rate=22867.13/min [1100000], rate=22996.52/min [1110000], rate=23125.00/min [1120000], rate=23260.64/min [1130000], rate=23395.45/min [1140000], rate=23529.41/min [1150000], rate=23670.67/min [1160000], rate=23803.01/min [1170000], rate=23950.87/min [1180000], rate=24089.83/min [1190000], rate=24228.03/min [1200000], rate=24373.73/min [1210000], rate=24518.74/min [1220000], rate=24654.77/min [1230000], rate=24798.39/min [1240000], rate=24941.33/min [1250000], rate=25092.00/min [1260000], rate=25183.21/min [1270000], rate=25240.15/min [1280000], rate=25304.78/min [1290000], rate=25377.05/min [1300000], rate=25473.55/min [1310000], rate=25560.98/min [1320000], rate=25647.67/min [1330000], rate=25775.19/min [1340000], rate=25893.72/min [1350000], rate=26003.21/min [1360000], rate=26095.30/min [1370000], rate=26203.38/min [1380000], rate=26310.77/min [1390000], rate=26417.48/min [1400000], rate=26531.90/min [1410000], rate=26654.06/min [1420000], rate=26767.20/min [1430000], rate=26888.12/min [1440000], rate=27016.89/min [1450000], rate=27136.62/min [1460000], rate=27255.76/min [1470000], rate=27391.30/min [1480000], rate=27509.29/min [1490000], rate=27635.24/min [1500000], rate=27769.21/min [1510000], rate=27911.28/min [1520000], rate=28061.54/min [1530000], rate=28194.10/min [1540000], rate=28360.96/min [1550000], rate=28510.12/min [1560000], rate=28658.91/min [1570000], rate=28807.34/min [1580000], rate=28973.11/min [1590000], rate=29138.67/min [1600000], rate=29286.15/min [1610000], rate=29442.24/min [1620000], rate=29598.05/min [1630000], rate=29735.48/min [1640000], rate=29863.43/min [1650000], rate=29981.83/min [1660000], rate=29981.94/min [1670000], rate=29848.08/min [1680000], rate=29734.51/min [1690000], rate=29605.84/min [1700000], rate=29462.74/min [1710000], rate=29322.66/min [1720000], rate=29243.41/min [1730000], rate=29091.93/min [1740000], rate=29072.68/min [1750000], rate=29102.00/min [1760000], rate=29098.93/min [1770000], rate=29079.96/min [1780000], rate=29108.75/min [1790000], rate=29137.28/min [1800000], rate=29110.51/min [1810000], rate=29123.09/min [1820000], rate=29158.88/min [1830000], rate=29155.60/min [1840000], rate=29198.62/min [1850000], rate=29241.31/min [1860000], rate=29268.29/min [1870000], rate=29287.39/min [1880000], rate=29321.55/min [1890000], rate=29325.06/min [1900000], rate=29290.85/min [1910000], rate=29249.62/min [1920000], rate=29260.86/min [1930000], rate=29264.59/min [1940000], rate=29275.65/min [1950000], rate=29301.28/min [1960000], rate=29334.00/min [1970000], rate=29388.36/min [1980000], rate=29435.08/min [1990000], rate=29474.20/min [2000000], rate=29513.03/min [2010000], rate=29558.82/min [2020000], rate=29618.77/min [2030000], rate=29678.36/min [2040000], rate=29744.84/min [2050000], rate=29818.18/min [2060000], rate=29898.40/min [2070000], rate=29956.58/min [2080000], rate=30021.65/min [2090000], rate=30079.16/min [2100000], rate=30143.54/min [2110000], rate=30207.59/min [2120000], rate=30271.30/min [2130000], rate=30334.68/min [2140000], rate=30412.13/min [2150000], rate=30474.84/min [2160000], rate=30544.43/min [2170000], rate=30613.68/min [2180000], rate=30682.62/min [2190000], rate=30765.63/min [2200000], rate=30841.12/min [2210000], rate=30916.30/min [2220000], rate=30998.37/min [2230000], rate=31080.14/min [2240000], rate=31161.60/min [2250000], rate=31250.00/min [2260000], rate=31338.11/min [2270000], rate=31433.19/min [2280000], rate=31520.74/min [2290000], rate=31615.28/min [2300000], rate=31709.56/min [2310000], rate=31803.58/min [2320000], rate=31897.34/min [2330000], rate=31925.10/min [2340000], rate=31959.94/min [2350000], rate=31972.79/min [2360000], rate=32007.23/min [2370000], rate=32041.46/min [2380000], rate=32089.89/min [2390000], rate=32138.05/min [2400000], rate=32178.77/min [2410000], rate=32226.43/min [2420000], rate=32281.01/min [2430000], rate=32335.33/min [2440000], rate=32396.55/min [2450000], rate=32457.50/min [2460000], rate=32503.85/min [2470000], rate=32564.27/min [2480000], rate=32624.42/min [2490000], rate=32677.17/min [2500000], rate=32729.65/min [2510000], rate=32781.89/min [2520000], rate=32833.88/min [2530000], rate=32885.62/min [2540000], rate=32937.11/min [2550000], rate=32995.47/min [2560000], rate=33053.58/min [2570000], rate=33125.67/min [2580000], rate=33169.06/min [2590000], rate=33233.53/min [2600000], rate=33311.98/min [2610000], rate=33383.07/min [2620000], rate=33468.17/min [2630000], rate=33545.92/min [2640000], rate=33630.57/min [2650000], rate=33722.16/min [2660000], rate=33806.40/min [2670000], rate=33890.42/min [2680000], rate=33974.22/min [2690000], rate=34057.82/min [2700000], rate=34148.40/min [2710000], rate=34246.00/min [2720000], rate=34343.43/min [2730000], rate=34433.47/min [2740000], rate=34523.31/min [2750000], rate=34598.45/min [2760000], rate=34673.37/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.m5bFFMSaGF/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.m5bFFMSaGF/ctat_genome_lib_build_dir --filt_file /tmp/nxf.m5bFFMSaGF/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.m5bFFMSaGF/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -parsing /tmp/nxf.m5bFFMSaGF/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info. 6000000.00 reads per min processed... 12000000.00 reads per min processed... 18000000.00 reads per min processed... 12000000.00 reads per min processed... 7500000.00 reads per min processed... 7200000.00 reads per min processed... 7000000.00 reads per min processed... 6857142.86 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 5571428.57 reads per min processed... 5600000.00 reads per min processed... 5625000.00 reads per min processed... 5333333.33 reads per min processed... 5368421.05 reads per min processed... 5400000.00 reads per min processed... 5428571.43 reads per min processed... 5217391.30 reads per min processed... 5250000.00 reads per min processed... 5280000.00 reads per min processed... 5307692.31 reads per min processed... 5333333.33 reads per min processed... 5172413.79 reads per min processed... 5200000.00 reads per min processed... 5062500.00 reads per min processed... 4941176.47 reads per min processed... 4971428.57 reads per min processed... 4864864.86 reads per min processed... 4894736.84 reads per min processed... 4923076.92 reads per min processed... 4829268.29 reads per min processed... 4857142.86 reads per min processed... 4772727.27 reads per min processed... 4800000.00 reads per min processed... 4826086.96 reads per min processed... 4750000.00 reads per min processed... 4775510.20 reads per min processed... 4800000.00 reads per min processed... 4823529.41 reads per min processed... 4846153.85 reads per min processed... 4867924.53 reads per min processed... 4800000.00 reads per min processed... 4821428.57 reads per min processed... 4842105.26 reads per min processed... 4862068.97 reads per min processed... 4881355.93 reads per min processed... 4900000.00 reads per min processed... 4838709.68 reads per min processed... 4857142.86 reads per min processed... 4875000.00 reads per min processed... 4892307.69 reads per min processed... 4909090.91 reads per min processed... 4925373.13 reads per min processed... 5014925.37 reads per min processed... 5029411.76 reads per min processed... 5043478.26 reads per min processed... 5057142.86 reads per min processed... 5070422.54 reads per min processed... 5083333.33 reads per min processed... 5095890.41 reads per min processed... 5040000.00 reads per min processed... 5052631.58 reads per min processed... 5064935.06 reads per min processed... 5076923.08 reads per min processed... 5088607.59 reads per min processed... 5100000.00 reads per min processed... 5048780.49 reads per min processed... 5060240.96 reads per min processed... 5071428.57 reads per min processed... 5082352.94 reads per min processed... 5093023.26 reads per min processed... 5045454.55 reads per min processed... 5056179.78 reads per min processed... 5066666.67 reads per min processed... 5076923.08 reads per min processed... 5032258.06 reads per min processed... 5042553.19 reads per min processed... 5052631.58 reads per min processed... 5062500.00 reads per min processed... 5072164.95 reads per min processed... 5030303.03 reads per min processed... 5040000.00 reads per min processed... 5049504.95 reads per min processed... 5058823.53 reads per min processed... 5067961.17 reads per min processed... 5076923.08 reads per min processed... 5037735.85 reads per min processed... done. * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.m5bFFMSaGF/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.m5bFFMSaGF/./star-fusion.preliminary/star-fusion -parsing fusion evidence: /tmp/nxf.m5bFFMSaGF/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -outputting fusion candidates to file: /tmp/nxf.m5bFFMSaGF/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.m5bFFMSaGF/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.m5bFFMSaGF/BVT_FFPE_TRNA_stm_06_A23WKFTLT4_2.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.m5bFFMSaGF/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.m5bFFMSaGF/./star-fusion.preliminary/star-fusion CMD: mkdir -p /tmp/nxf.m5bFFMSaGF/./star-fusion.preliminary/star-fusion.filter.intermediates_dir EM: Starting log likelihood: -311573.343292 EM: Round [1] log likelihood: -311381.400772 EM: Round [2] log likelihood: -311308.816301 EM: Round [3] log likelihood: -311273.157113 EM: Round [4] log likelihood: -311253.788447 EM: Round [5] log likelihood: -311242.697614 EM: Round [6] log likelihood: -311236.103141 EM: Round [7] log likelihood: -311232.038444 EM: Round [8] log likelihood: -311229.436703 EM: Round [9] log likelihood: -311227.706190 EM: Round [10] log likelihood: -311226.511837 EM: Round [11] log likelihood: -311225.659131 EM: Round [12] log likelihood: -311225.031824 EM: Round [13] log likelihood: -311224.558213 EM: Round [14] log likelihood: -311224.192617 EM: Round [15] log likelihood: -311223.904990 EM: Round [16] log likelihood: -311223.674976 EM: Round [17] log likelihood: -311223.488392 EM: Round [18] log likelihood: -311223.335120 EM: Round [19] log likelihood: -311223.207778 EM: Round [20] log likelihood: -311223.100888 EM: Round [21] log likelihood: -311223.010310 EM: Round [22] log likelihood: -311222.932882 EM: Round [23] log likelihood: -311222.866151 EM: Round [24] log likelihood: -311222.808199 EM: Round [25] log likelihood: -311222.757512 EM: Round [26] log likelihood: -311222.712882 EM: Round [27] log likelihood: -311222.673339 EM: Round [28] log likelihood: -311222.638100 EM: Round [29] log likelihood: -311222.606526 EM: Round [30] log likelihood: -311222.578095 EM: Round [31] log likelihood: -311222.552374 EM: Round [32] log likelihood: -311222.529006 EM: Round [33] log likelihood: -311222.507691 EM: Round [34] log likelihood: -311222.488179 EM: Round [35] log likelihood: -311222.470258 EM: Round [36] log likelihood: -311222.453748 EM: Round [37] log likelihood: -311222.438495 EM: Round [38] log likelihood: -311222.424369 EM: Round [39] log likelihood: -311222.411254 EM: Round [40] log likelihood: -311222.399054 EM: Round [41] log likelihood: -311222.387682 EM: Round [42] log likelihood: -311222.377062 EM: Round [43] log likelihood: -311222.367129 EM: Round [44] log likelihood: -311222.357825 EM: Round [45] log likelihood: -311222.349097 EM: Round [46] log likelihood: -311222.340899 EM: Round [47] log likelihood: -311222.333191 EM: Round [48] log likelihood: -311222.325934 EM: Round [49] log likelihood: -311222.319096 EM: Round [50] log likelihood: -311222.312647 EM: Round [51] log likelihood: -311222.306559 EM: Round [52] log likelihood: -311222.300808 EM: Round [53] log likelihood: -311222.295369 EM: Round [54] log likelihood: -311222.290224 EM: Round [55] log likelihood: -311222.285353 EM: Round [56] log likelihood: -311222.280738 EM: Round [57] log likelihood: -311222.276364 EM: Round [58] log likelihood: -311222.272215 EM: Round [59] log likelihood: -311222.268278 EM: Round [60] log likelihood: -311222.264541 EM: Round [61] log likelihood: -311222.260991 EM: Round [62] log likelihood: -311222.257618 EM: Round [63] log likelihood: -311222.254411 EM: Round [64] log likelihood: -311222.251362 EM: Round [65] log likelihood: -311222.248461 EM: Round [66] log likelihood: -311222.245700 EM: Round [67] log likelihood: -311222.243071 EM: Round [68] log likelihood: -311222.240567 EM: Round [69] log likelihood: -311222.238183 EM: Round [70] log likelihood: -311222.235910 EM: Round [71] log likelihood: -311222.233744 EM: Round [72] log likelihood: -311222.231678 EM: Round [73] log likelihood: -311222.229708 EM: Round [74] log likelihood: -311222.227828 EM: Round [75] log likelihood: -311222.226035 EM: Round [76] log likelihood: -311222.224323 EM: Round [77] log likelihood: -311222.222689 EM: Round [78] log likelihood: -311222.221129 EM: Round [79] log likelihood: -311222.219638 EM: Round [80] log likelihood: -311222.218214 EM: Round [81] log likelihood: -311222.216854 EM: Round [82] log likelihood: -311222.215554 EM: Round [83] log likelihood: -311222.214311 EM: Round [84] log likelihood: -311222.213123 EM: Round [85] log likelihood: -311222.211986 EM: Round [86] log likelihood: -311222.210900 EM: Round [87] log likelihood: -311222.209860 EM: Round [88] log likelihood: -311222.208865 EM: Round [89] log likelihood: -311222.207914 EM: Round [90] log likelihood: -311222.207003 EM: Round [91] log likelihood: -311222.206131 EM: Round [92] log likelihood: -311222.205296 EM: Round [93] log likelihood: -311222.204497 EM: Round [94] log likelihood: -311222.203732 EM: Round [95] log likelihood: -311222.202999 EM: Round [96] log likelihood: -311222.202296 EM: Round [97] log likelihood: -311222.201624 EM: Round [98] log likelihood: -311222.200979 EM: Round [99] log likelihood: -311222.200361 EM: Round [100] log likelihood: -311222.199769 EM: Round [101] log likelihood: -311222.199201 EM: Round [102] log likelihood: -311222.198657 EM: Round [103] log likelihood: -311222.198136 EM: Round [104] log likelihood: -311222.197635 EM: Round [105] log likelihood: -311222.197155 EM: Round [106] log likelihood: -311222.196695 EM: Round [107] log likelihood: -311222.196254 EM: Round [108] log likelihood: -311222.195830 EM: Round [109] log likelihood: -311222.195424 EM: Round [110] log likelihood: -311222.195034 EM: Round [111] log likelihood: -311222.194660 EM: Round [112] log likelihood: -311222.194300 EM: Round [113] log likelihood: -311222.193955 EM: Round [114] log likelihood: -311222.193624 EM: Round [115] log likelihood: -311222.193307 EM: Round [116] log likelihood: -311222.193001 EM: Round [117] log likelihood: -311222.192708 EM: Round [118] log likelihood: -311222.192427 EM: Round [119] log likelihood: -311222.192156 EM: Round [120] log likelihood: -311222.191897 EM: Round [121] log likelihood: -311222.191647 EM: Round [122] log likelihood: -311222.191407 EM: Round [123] log likelihood: -311222.191177 EM: Round [124] log likelihood: -311222.190955 EM: Round [125] log likelihood: -311222.190742 EM: Round [126] log likelihood: -311222.190538 EM: Round [127] log likelihood: -311222.190341 EM: Round [128] log likelihood: -311222.190152 EM: Round [129] log likelihood: -311222.189970 EM: Round [130] log likelihood: -311222.189795 EM: Round [131] log likelihood: -311222.189627 EM: Round [132] log likelihood: -311222.189466 EM: Round [133] log likelihood: -311222.189310 EM: Round [134] log likelihood: -311222.189160 EM: Round [135] log likelihood: -311222.189016 EM: Round [136] log likelihood: -311222.188878 EM: Round [137] log likelihood: -311222.188745 EM: Round [138] log likelihood: -311222.188616 EM: Round [139] log likelihood: -311222.188493 EM: Round [140] log likelihood: -311222.188374 EM: Round [141] log likelihood: -311222.188260 EM: Round [142] log likelihood: -311222.188150 EM: Round [143] log likelihood: -311222.188044 EM: Round [144] log likelihood: -311222.187942 EM: Round [145] log likelihood: -311222.187843 EM: Stopping iterations at round 145 due to insufficient improvement in likelihood. EM: Starting log likelihood: -311006.533096 EM: Round [1] log likelihood: -310853.524531 EM: Round [2] log likelihood: -310797.606622 EM: Round [3] log likelihood: -310770.872910 EM: Round [4] log likelihood: -310756.679246 EM: Round [5] log likelihood: -310748.709356 EM: Round [6] log likelihood: -310744.049958 EM: Round [7] log likelihood: -310741.219754 EM: Round [8] log likelihood: -310739.430471 EM: Round [9] log likelihood: -310738.251966 EM: Round [10] log likelihood: -310737.444243 EM: Round [11] log likelihood: -310736.869907 EM: Round [12] log likelihood: -310736.447939 EM: Round [13] log likelihood: -310736.128996 EM: Round [14] log likelihood: -310735.882010 EM: Round [15] log likelihood: -310735.686756 EM: Round [16] log likelihood: -310735.529647 EM: Round [17] log likelihood: -310735.401280 EM: Round [18] log likelihood: -310735.294976 EM: Round [19] log likelihood: -310735.205879 EM: Round [20] log likelihood: -310735.130389 EM: Round [21] log likelihood: -310735.065788 EM: Round [22] log likelihood: -310735.009997 EM: Round [23] log likelihood: -310734.961404 EM: Round [24] log likelihood: -310734.918744 EM: Round [25] log likelihood: -310734.881019 EM: Round [26] log likelihood: -310734.847429 EM: Round [27] log likelihood: -310734.817334 EM: Round [28] log likelihood: -310734.790212 EM: Round [29] log likelihood: -310734.765639 EM: Round [30] log likelihood: -310734.743266 EM: Round [31] log likelihood: -310734.722805 EM: Round [32] log likelihood: -310734.704018 EM: Round [33] log likelihood: -310734.686702 EM: Round [34] log likelihood: -310734.670691 EM: Round [35] log likelihood: -310734.655840 EM: Round [36] log likelihood: -310734.642029 EM: Round [37] log likelihood: -310734.629154 EM: Round [38] log likelihood: -310734.617124 EM: Round [39] log likelihood: -310734.605862 EM: Round [40] log likelihood: -310734.595301 EM: Round [41] log likelihood: -310734.585382 EM: Round [42] log likelihood: -310734.576051 EM: Round [43] log likelihood: -310734.567264 EM: Round [44] log likelihood: -310734.558978 EM: Round [45] log likelihood: -310734.551158 EM: Round [46] log likelihood: -310734.543769 EM: Round [47] log likelihood: -310734.536783 EM: Round [48] log likelihood: -310734.530172 EM: Round [49] log likelihood: -310734.523911 EM: Round [50] log likelihood: -310734.517979 EM: Round [51] log likelihood: -310734.512355 EM: Round [52] log likelihood: -310734.507020 EM: Round [53] log likelihood: -310734.501956 EM: Round [54] log likelihood: -310734.497147 EM: Round [55] log likelihood: -310734.492580 EM: Round [56] log likelihood: -310734.488239 EM: Round [57] log likelihood: -310734.484112 EM: Round [58] log likelihood: -310734.480187 EM: Round [59] log likelihood: -310734.476453 EM: Round [60] log likelihood: -310734.472900 EM: Round [61] log likelihood: -310734.469517 EM: Round [62] log likelihood: -310734.466296 EM: Round [63] log likelihood: -310734.463228 EM: Round [64] log likelihood: -310734.460305 EM: Round [65] log likelihood: -310734.457519 EM: Round [66] log likelihood: -310734.454864 EM: Round [67] log likelihood: -310734.452332 EM: Round [68] log likelihood: -310734.449918 EM: Round [69] log likelihood: -310734.447615 EM: Round [70] log likelihood: -310734.445418 EM: Round [71] log likelihood: -310734.443321 EM: Round [72] log likelihood: -310734.441320 EM: Round [73] log likelihood: -310734.439410 EM: Round [74] log likelihood: -310734.437586 EM: Round [75] log likelihood: -310734.435844 EM: Round [76] log likelihood: -310734.434180 EM: Round [77] log likelihood: -310734.432590 EM: Round [78] log likelihood: -310734.431071 EM: Round [79] log likelihood: -310734.429619 EM: Round [80] log likelihood: -310734.428232 EM: Round [81] log likelihood: -310734.426905 EM: Round [82] log likelihood: -310734.425637 EM: Round [83] log likelihood: -310734.424424 EM: Round [84] log likelihood: -310734.423264 EM: Round [85] log likelihood: -310734.422154 EM: Round [86] log likelihood: -310734.421092 EM: Round [87] log likelihood: -310734.420076 EM: Round [88] log likelihood: -310734.419104 EM: Round [89] log likelihood: -310734.418173 EM: Round [90] log likelihood: -310734.417282 EM: Round [91] log likelihood: -310734.416429 EM: Round [92] log likelihood: -310734.415612 EM: Round [93] log likelihood: -310734.414829 EM: Round [94] log likelihood: -310734.414080 EM: Round [95] log likelihood: -310734.413362 EM: Round [96] log likelihood: -310734.412674 EM: Round [97] log likelihood: -310734.412015 EM: Round [98] log likelihood: -310734.411383 EM: Round [99] log likelihood: -310734.410778 EM: Round [100] log likelihood: -310734.410198 EM: Round [101] log likelihood: -310734.409641 EM: Round [102] log likelihood: -310734.409108 EM: Round [103] log likelihood: -310734.408596 EM: Round [104] log likelihood: -310734.408106 EM: Round [105] log likelihood: -310734.407635 EM: Round [106] log likelihood: -310734.407184 EM: Round [107] log likelihood: -310734.406751 EM: Round [108] log likelihood: -310734.406335 EM: Round [109] log likelihood: -310734.405937 EM: Round [110] log likelihood: -310734.405554 EM: Round [111] log likelihood: -310734.405187 EM: Round [112] log likelihood: -310734.404834 EM: Round [113] log likelihood: -310734.404496 EM: Round [114] log likelihood: -310734.404171 EM: Round [115] log likelihood: -310734.403859 EM: Round [116] log likelihood: -310734.403559 EM: Round [117] log likelihood: -310734.403272 EM: Round [118] log likelihood: -310734.402995 EM: Round [119] log likelihood: -310734.402730 EM: Round [120] log likelihood: -310734.402475 EM: Round [121] log likelihood: -310734.402230 EM: Round [122] log likelihood: -310734.401994 EM: Round [123] log likelihood: -310734.401768 EM: Round [124] log likelihood: -310734.401550 EM: Round [125] log likelihood: -310734.401341 EM: Round [126] log likelihood: -310734.401140 EM: Round [127] log likelihood: -310734.400947 EM: Round [128] log likelihood: -310734.400761 EM: Round [129] log likelihood: -310734.400583 EM: Round [130] log likelihood: -310734.400411 EM: Round [131] log likelihood: -310734.400246 EM: Round [132] log likelihood: -310734.400087 EM: Round [133] log likelihood: -310734.399934 EM: Round [134] log likelihood: -310734.399787 EM: Round [135] log likelihood: -310734.399646 EM: Round [136] log likelihood: -310734.399509 EM: Round [137] log likelihood: -310734.399378 EM: Round [138] log likelihood: -310734.399252 EM: Round [139] log likelihood: -310734.399131 EM: Round [140] log likelihood: -310734.399014 EM: Round [141] log likelihood: -310734.398902 EM: Round [142] log likelihood: -310734.398793 EM: Round [143] log likelihood: -310734.398689 EM: Round [144] log likelihood: -310734.398589 EM: Round [145] log likelihood: -310734.398492 EM: Stopping iterations at round 145 due to insufficient improvement in likelihood. CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.m5bFFMSaGF/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.m5bFFMSaGF/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.m5bFFMSaGF/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.m5bFFMSaGF/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.m5bFFMSaGF/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.m5bFFMSaGF/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.m5bFFMSaGF/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20 CMD: cp /tmp/nxf.m5bFFMSaGF/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.m5bFFMSaGF/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.m5bFFMSaGF/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.m5bFFMSaGF/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged CMD: ln -sf /tmp/nxf.m5bFFMSaGF/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.m5bFFMSaGF/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered * Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.m5bFFMSaGF/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 246686357 > /tmp/nxf.m5bFFMSaGF/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM * Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.m5bFFMSaGF/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.m5bFFMSaGF/ctat_genome_lib_build_dir > /tmp/nxf.m5bFFMSaGF/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.m5bFFMSaGF/ctat_genome_lib_build_dir --annotate /tmp/nxf.m5bFFMSaGF/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.m5bFFMSaGF/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot * Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.m5bFFMSaGF/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.m5bFFMSaGF/ctat_genome_lib_build_dir -done, see /tmp/nxf.m5bFFMSaGF/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass * Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.m5bFFMSaGF/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.m5bFFMSaGF/ctat_genome_lib_build_dir -filter_likely_RT_artifacts: (pass: 1373, filtered: 12150) * Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.m5bFFMSaGF/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001 * Running CMD: cp /tmp/nxf.m5bFFMSaGF/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv * Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.m5bFFMSaGF/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000245958.6] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000288549.1] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000278399.1] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000234715.2] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000225851.1] WARNING, no entry stored in dbm for [ENSG00000229739.4] WARNING, no entry stored in dbm for [ENSG00000227681.5] WARNING, no entry stored in dbm for [ENSG00000287721.1] WARNING, no entry stored in dbm for [ENSG00000220685.3] WARNING, no entry stored in dbm for [ENSG00000180747.15] WARNING, no entry stored in dbm for [ENSG00000280136.2] WARNING, no entry stored in dbm for [ENSG00000226049.3] WARNING, no entry stored in dbm for [ENSG00000260404.3] WARNING, no entry stored in dbm for [ENSG00000230559.1] WARNING, no entry stored in dbm for [ENSG00000234928.1] WARNING, no entry stored in dbm for [ENSG00000227755.1] WARNING, no entry stored in dbm for [ENSG00000233930.4] WARNING, no entry stored in dbm for [ENSG00000286948.1] WARNING, no entry stored in dbm for [ENSG00000214433.4] WARNING, no entry stored in dbm for [ENSG00000271869.1] WARNING, no entry stored in dbm for [ENSG00000271699.5] WARNING, no entry stored in dbm for [ENSG00000282057.1] WARNING, no entry stored in dbm for [ENSG00000254610.3] WARNING, no entry stored in dbm for [ENSG00000248618.1] WARNING, no entry stored in dbm for [ENSG00000248334.6] WARNING, no entry stored in dbm for [ENSG00000282458.1] WARNING, no entry stored in dbm for [ENSG00000234769.7] WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [ENSG00000257924.1] WARNING, no entry stored in dbm for [ENSG00000267519.6] WARNING, no entry stored in dbm for [ENSG00000229352.1] WARNING, no entry stored in dbm for [ENSG00000240350.3] WARNING, no entry stored in dbm for [ENSG00000270330.1] WARNING, no entry stored in dbm for [ENSG00000227681.5] WARNING, no entry stored in dbm for [ENSG00000249859.12] WARNING, no entry stored in dbm for [ENSG00000234928.1] WARNING, no entry stored in dbm for [ENSG00000227755.1] WARNING, no entry stored in dbm for [ENSG00000214617.9] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000224555.3] WARNING, no entry stored in dbm for [ENSG00000215483.11] WARNING, no entry stored in dbm for [ENSG00000238165.1] WARNING, no entry stored in dbm for [ENSG00000286214.1] WARNING, no entry stored in dbm for [ENSG00000228980.4] WARNING, no entry stored in dbm for [ENSG00000179406.8] WARNING, no entry stored in dbm for [ENSG00000279569.1] WARNING, no entry stored in dbm for [ENSG00000266573.6] WARNING, no entry stored in dbm for [ENSG00000230305.2] WARNING, no entry stored in dbm for [ENSG00000225594.1] WARNING, no entry stored in dbm for [ENSG00000248539.1] WARNING, no entry stored in dbm for [ENSG00000269794.1] WARNING, no entry stored in dbm for [ENSG00000212939.2] WARNING, no entry stored in dbm for [ENSG00000279217.1] WARNING, no entry stored in dbm for [ENSG00000230202.1] WARNING, no entry stored in dbm for [ENSG00000241743.4] WARNING, no entry stored in dbm for [ENSG00000236778.8] WARNING, no entry stored in dbm for [ENSG00000262445.3] WARNING, no entry stored in dbm for [ENSG00000282458.1] WARNING, no entry stored in dbm for [ENSG00000146556.14] WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [ENSG00000229124.7] WARNING, no entry stored in dbm for [ENSG00000261360.1] WARNING, no entry stored in dbm for [ENSG00000237616.1] WARNING, no entry stored in dbm for [ENSG00000242435.1] WARNING, no entry stored in dbm for [ENSG00000078319.10] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000249348.1] WARNING, no entry stored in dbm for [ENSG00000259363.6] WARNING, no entry stored in dbm for [ENSG00000259429.5] WARNING, no entry stored in dbm for [ENSG00000235207.1] WARNING, no entry stored in dbm for [ENSG00000287306.1] WARNING, no entry stored in dbm for [ENSG00000240095.1] WARNING, no entry stored in dbm for [ENSG00000261608.1] WARNING, no entry stored in dbm for [ENSG00000281560.1] WARNING, no entry stored in dbm for [ENSG00000238283.3] WARNING, no entry stored in dbm for [ENSG00000281896.1] WARNING, no entry stored in dbm for [ENSG00000268362.6] WARNING, no entry stored in dbm for [ENSG00000236900.1] WARNING, no entry stored in dbm for [ENSG00000215317.2] WARNING, no entry stored in dbm for [ENSG00000106610.15] WARNING, no entry stored in dbm for [ENSG00000251002.8] WARNING, no entry stored in dbm for [ENSG00000230490.3] WARNING, no entry stored in dbm for [ENSG00000228146.8] WARNING, no entry stored in dbm for [ENSG00000268605.1] WARNING, no entry stored in dbm for [ENSG00000270344.3] WARNING, no entry stored in dbm for [ENSG00000237783.2] WARNING, no entry stored in dbm for [ENSG00000265843.3] WARNING, no entry stored in dbm for [ENSG00000260727.2] WARNING, no entry stored in dbm for [ENSG00000286953.1] WARNING, no entry stored in dbm for [ENSG00000187172.15] WARNING, no entry stored in dbm for [ENSG00000275110.1] WARNING, no entry stored in dbm for [ENSG00000224523.1] WARNING, no entry stored in dbm for [ENSG00000274383.1] WARNING, no entry stored in dbm for [ENSG00000229207.1] WARNING, no entry stored in dbm for [ENSG00000227115.8] WARNING, no entry stored in dbm for [ENSG00000271101.1] WARNING, no entry stored in dbm for [ENSG00000185986.12] WARNING, no entry stored in dbm for [ENSG00000188002.10] WARNING, no entry stored in dbm for [ENSG00000240405.7] WARNING, no entry stored in dbm for [ENSG00000255850.2] WARNING, no entry stored in dbm for [ENSG00000260597.1] WARNING, no entry stored in dbm for [ENSG00000249364.6] WARNING, no entry stored in dbm for [ENSG00000251441.3] WARNING, no entry stored in dbm for [ENSG00000243355.1] WARNING, no entry stored in dbm for [ENSG00000233416.1] WARNING, no entry stored in dbm for [ENSG00000281344.1] WARNING, no entry stored in dbm for [ENSG00000230629.2] WARNING, no entry stored in dbm for [ENSG00000220848.5] WARNING, no entry stored in dbm for [ENSG00000228568.1] WARNING, no entry stored in dbm for [ENSG00000238069.1] WARNING, no entry stored in dbm for [ENSG00000244705.1] WARNING, no entry stored in dbm for [ENSG00000242071.3] WARNING, no entry stored in dbm for [ENSG00000220370.1] WARNING, no entry stored in dbm for [ENSG00000184139.8] WARNING, no entry stored in dbm for [ENSG00000215869.4] WARNING, no entry stored in dbm for [ENSG00000241061.3] WARNING, no entry stored in dbm for [ENSG00000288663.1] WARNING, no entry stored in dbm for [ENSG00000223671.2] WARNING, no entry stored in dbm for [ENSG00000255286.2] WARNING, no entry stored in dbm for [ENSG00000239686.1] WARNING, no entry stored in dbm for [ENSG00000239671.1] WARNING, no entry stored in dbm for [ENSG00000233939.1] WARNING, no entry stored in dbm for [ENSG00000181524.6] WARNING, no entry stored in dbm for [ENSG00000244237.1] WARNING, no entry stored in dbm for [ENSG00000278580.1] WARNING, no entry stored in dbm for [ENSG00000218754.4] WARNING, no entry stored in dbm for [ENSG00000232174.3] WARNING, no entry stored in dbm for [ENSG00000286403.1] WARNING, no entry stored in dbm for [ENSG00000264538.6] WARNING, no entry stored in dbm for [ENSG00000239437.3] WARNING, no entry stored in dbm for [ENSG00000222616.1] WARNING, no entry stored in dbm for [ENSG00000253219.1] WARNING, no entry stored in dbm for [ENSG00000232104.3] WARNING, no entry stored in dbm for [ENSG00000273192.1] WARNING, no entry stored in dbm for [ENSG00000235352.1] WARNING, no entry stored in dbm for [ENSG00000268592.3] WARNING, no entry stored in dbm for [ENSG00000224613.7] WARNING, no entry stored in dbm for [ENSG00000246067.8] WARNING, no entry stored in dbm for [ENSG00000259905.7] WARNING, no entry stored in dbm for [ENSG00000233695.2] WARNING, no entry stored in dbm for [ENSG00000250337.7] WARNING, no entry stored in dbm for [ENSG00000267598.1] WARNING, no entry stored in dbm for [ENSG00000237094.12] WARNING, no entry stored in dbm for [ENSG00000203739.4] WARNING, no entry stored in dbm for [ENSG00000260528.5] WARNING, no entry stored in dbm for [ENSG00000257557.2] WARNING, no entry stored in dbm for [ENSG00000205534.6] WARNING, no entry stored in dbm for [ENSG00000205562.3] WARNING, no entry stored in dbm for [ENSG00000263443.1] WARNING, no entry stored in dbm for [ENSG00000253579.1] WARNING, no entry stored in dbm for [ENSG00000254681.6] WARNING, no entry stored in dbm for [ENSG00000244257.5] WARNING, no entry stored in dbm for [ENSG00000244257.5] WARNING, no entry stored in dbm for [ENSG00000223519.8] WARNING, no entry stored in dbm for [ENSG00000244257.5] WARNING, no entry stored in dbm for [ENSG00000237399.7] WARNING, no entry stored in dbm for [ENSG00000224896.2] WARNING, no entry stored in dbm for [ENSG00000229739.4] WARNING, no entry stored in dbm for [ENSG00000269934.3] WARNING, no entry stored in dbm for [ENSG00000286152.1] WARNING, no entry stored in dbm for [ENSG00000280011.1] WARNING, no entry stored in dbm for [ENSG00000280623.1] WARNING, no entry stored in dbm for [ENSG00000182057.5] WARNING, no entry stored in dbm for [ENSG00000236719.5] WARNING, no entry stored in dbm for [ENSG00000179799.9] WARNING, no entry stored in dbm for [ENSG00000254948.1] WARNING, no entry stored in dbm for [ENSG00000229951.5] WARNING, no entry stored in dbm for [ENSG00000106133.18] WARNING, no entry stored in dbm for [ENSG00000106133.18] WARNING, no entry stored in dbm for [ENSG00000106133.18] WARNING, no entry stored in dbm for [ENSG00000280441.3] WARNING, no entry stored in dbm for [ENSG00000280441.3] WARNING, no entry stored in dbm for [ENSG00000261420.1] WARNING, no entry stored in dbm for [ENSG00000256346.1] WARNING, no entry stored in dbm for [ENSG00000226970.2] WARNING, no entry stored in dbm for [ENSG00000243967.4] WARNING, no entry stored in dbm for [ENSG00000205449.11] WARNING, no entry stored in dbm for [ENSG00000258590.5] WARNING, no entry stored in dbm for [ENSG00000237206.1] WARNING, no entry stored in dbm for [ENSG00000002079.14] WARNING, no entry stored in dbm for [ENSG00000197744.5] WARNING, no entry stored in dbm for [ENSG00000250590.6] WARNING, no entry stored in dbm for [ENSG00000287350.1] WARNING, no entry stored in dbm for [ENSG00000234072.1] WARNING, no entry stored in dbm for [ENSG00000285872.1] WARNING, no entry stored in dbm for [ENSG00000236901.6] WARNING, no entry stored in dbm for [ENSG00000172965.17] WARNING, no entry stored in dbm for [ENSG00000234231.4] WARNING, no entry stored in dbm for [ENSG00000270069.1] WARNING, no entry stored in dbm for [ENSG00000232063.2] WARNING, no entry stored in dbm for [ENSG00000253557.6] WARNING, no entry stored in dbm for [ENSG00000234033.1] WARNING, no entry stored in dbm for [ENSG00000260423.2] WARNING, no entry stored in dbm for [ENSG00000235269.2] WARNING, no entry stored in dbm for [ENSG00000214425.8] WARNING, no entry stored in dbm for [ENSG00000222037.5] WARNING, no entry stored in dbm for [ENSG00000274712.2] WARNING, no entry stored in dbm for [ENSG00000257195.1] WARNING, no entry stored in dbm for [ENSG00000232527.8] WARNING, no entry stored in dbm for [ENSG00000272779.1] WARNING, no entry stored in dbm for [ENSG00000226822.3] WARNING, no entry stored in dbm for [ENSG00000255267.4] WARNING, no entry stored in dbm for [ENSG00000241288.8] WARNING, no entry stored in dbm for [ENSG00000235142.10] WARNING, no entry stored in dbm for [ENSG00000248238.2] WARNING, no entry stored in dbm for [ENSG00000250754.6] WARNING, no entry stored in dbm for [ENSG00000259485.2] WARNING, no entry stored in dbm for [ENSG00000226125.2] WARNING, no entry stored in dbm for [ENSG00000226383.7] WARNING, no entry stored in dbm for [ENSG00000232023.3] WARNING, no entry stored in dbm for [ENSG00000232679.2] WARNING, no entry stored in dbm for [ENSG00000198685.4] WARNING, no entry stored in dbm for [ENSG00000258583.7] WARNING, no entry stored in dbm for [ENSG00000251396.7] WARNING, no entry stored in dbm for [ENSG00000235437.8] WARNING, no entry stored in dbm for [ENSG00000229630.1] WARNING, no entry stored in dbm for [ENSG00000229671.3] WARNING, no entry stored in dbm for [ENSG00000228010.6] WARNING, no entry stored in dbm for [ENSG00000261455.1] WARNING, no entry stored in dbm for [ENSG00000282508.2] WARNING, no entry stored in dbm for [ENSG00000226002.1] WARNING, no entry stored in dbm for [ENSG00000225269.3] WARNING, no entry stored in dbm for [ENSG00000258279.4] WARNING, no entry stored in dbm for [ENSG00000205837.7] WARNING, no entry stored in dbm for [ENSG00000226025.9] WARNING, no entry stored in dbm for [ENSG00000287581.1] WARNING, no entry stored in dbm for [ENSG00000285875.1] WARNING, no entry stored in dbm for [ENSG00000284639.1] WARNING, no entry stored in dbm for [ENSG00000286675.1] WARNING, no entry stored in dbm for [ENSG00000206623.1] WARNING, no entry stored in dbm for [ENSG00000200224.2] WARNING, no entry stored in dbm for [ENSG00000207204.1] WARNING, no entry stored in dbm for [ENSG00000202350.1] WARNING, no entry stored in dbm for [ENSG00000206896.1] WARNING, no entry stored in dbm for [ENSG00000270864.1] WARNING, no entry stored in dbm for [ENSG00000261834.2] WARNING, no entry stored in dbm for [ENSG00000236140.1] WARNING, no entry stored in dbm for [ENSG00000285219.2] WARNING, no entry stored in dbm for [ENSG00000230869.1] WARNING, no entry stored in dbm for [ENSG00000187952.9] WARNING, no entry stored in dbm for [ENSG00000222004.7] WARNING, no entry stored in dbm for [ENSG00000255920.3] WARNING, no entry stored in dbm for [ENSG00000254713.2] WARNING, no entry stored in dbm for [ENSG00000236539.3] WARNING, no entry stored in dbm for [ENSG00000215283.3] WARNING, no entry stored in dbm for [ENSG00000255391.1] WARNING, no entry stored in dbm for [ENSG00000223656.1] WARNING, no entry stored in dbm for [ENSG00000124097.7] WARNING, no entry stored in dbm for [ENSG00000228078.1] WARNING, no entry stored in dbm for [ENSG00000248785.1] WARNING, no entry stored in dbm for [ENSG00000233299.1] WARNING, no entry stored in dbm for [ENSG00000286250.1] WARNING, no entry stored in dbm for [ENSG00000233836.7] WARNING, no entry stored in dbm for [ENSG00000233930.4] WARNING, no entry stored in dbm for [ENSG00000223896.2] WARNING, no entry stored in dbm for [ENSG00000234948.2] WARNING, no entry stored in dbm for [ENSG00000226472.8] WARNING, no entry stored in dbm for [ENSG00000226747.6] WARNING, no entry stored in dbm for [ENSG00000273382.1] WARNING, no entry stored in dbm for [ENSG00000198468.9] WARNING, no entry stored in dbm for [ENSG00000241860.7] WARNING, no entry stored in dbm for [ENSG00000231431.7] WARNING, no entry stored in dbm for [ENSG00000274177.1] WARNING, no entry stored in dbm for [ENSG00000278895.1] WARNING, no entry stored in dbm for [ENSG00000231528.3] WARNING, no entry stored in dbm for [ENSG00000243562.3] WARNING, no entry stored in dbm for [ENSG00000225393.1] WARNING, no entry stored in dbm for [ENSG00000271335.6] WARNING, no entry stored in dbm for [ENSG00000271118.1] WARNING, no entry stored in dbm for [ENSG00000245205.3] WARNING, no entry stored in dbm for [ENSG00000249859.12] WARNING, no entry stored in dbm for [ENSG00000185904.12] WARNING, no entry stored in dbm for [ENSG00000224897.8] WARNING, no entry stored in dbm for [ENSG00000229358.3] WARNING, no entry stored in dbm for [ENSG00000227195.11] WARNING, no entry stored in dbm for [ENSG00000271086.7] WARNING, no entry stored in dbm for [ENSG00000176584.18] WARNING, no entry stored in dbm for [ENSG00000261520.5] WARNING, no entry stored in dbm for [ENSG00000229231.1] WARNING, no entry stored in dbm for [ENSG00000254275.6] WARNING, no entry stored in dbm for [ENSG00000215030.5] WARNING, no entry stored in dbm for [ENSG00000273297.2] WARNING, no entry stored in dbm for [ENSG00000222041.11] WARNING, no entry stored in dbm for [ENSG00000237036.5] WARNING, no entry stored in dbm for [ENSG00000286458.1] WARNING, no entry stored in dbm for [ENSG00000226752.9] WARNING, no entry stored in dbm for [ENSG00000226752.9] WARNING, no entry stored in dbm for [ENSG00000278903.3] WARNING, no entry stored in dbm for [ENSG00000265728.1] WARNING, no entry stored in dbm for [ENSG00000233025.1] WARNING, no entry stored in dbm for [ENSG00000080947.15] WARNING, no entry stored in dbm for [ENSG00000237773.7] WARNING, no entry stored in dbm for [ENSG00000241818.1] WARNING, no entry stored in dbm for [ENSG00000227201.2] WARNING, no entry stored in dbm for [ENSG00000225005.1] WARNING, no entry stored in dbm for [ENSG00000260896.6] WARNING, no entry stored in dbm for [ENSG00000232553.3] WARNING, no entry stored in dbm for [ENSG00000254851.1] WARNING, no entry stored in dbm for [ENSG00000233695.2] WARNING, no entry stored in dbm for [ENSG00000285051.2] WARNING, no entry stored in dbm for [ENSG00000235084.3] WARNING, no entry stored in dbm for [ENSG00000233109.4] WARNING, no entry stored in dbm for [ENSG00000213753.11] WARNING, no entry stored in dbm for [ENSG00000225264.3] WARNING, no entry stored in dbm for [ENSG00000243144.7] WARNING, no entry stored in dbm for [ENSG00000251264.1] WARNING, no entry stored in dbm for [ENSG00000256695.2] WARNING, no entry stored in dbm for [ENSG00000203930.12] WARNING, no entry stored in dbm for [ENSG00000214064.3] WARNING, no entry stored in dbm for [ENSG00000279434.1] WARNING, no entry stored in dbm for [ENSG00000264617.1] WARNING, no entry stored in dbm for [ENSG00000254166.3] WARNING, no entry stored in dbm for [ENSG00000270994.1] WARNING, no entry stored in dbm for [ENSG00000205885.7] WARNING, no entry stored in dbm for [ENSG00000251629.7] WARNING, no entry stored in dbm for [ENSG00000215158.9] WARNING, no entry stored in dbm for [ENSG00000182352.8] WARNING, no entry stored in dbm for [ENSG00000285756.2] WARNING, no entry stored in dbm for [ENSG00000254676.1] WARNING, no entry stored in dbm for [ENSG00000258099.1] WARNING, no entry stored in dbm for [ENSG00000270025.2] WARNING, no entry stored in dbm for [ENSG00000243289.1] WARNING, no entry stored in dbm for [ENSG00000285967.1] WARNING, no entry stored in dbm for [ENSG00000279022.1] WARNING, no entry stored in dbm for [ENSG00000286444.1] WARNING, no entry stored in dbm for [ENSG00000286966.1] WARNING, no entry stored in dbm for [ENSG00000261286.1] WARNING, no entry stored in dbm for [ENSG00000257252.6] WARNING, no entry stored in dbm for [ENSG00000213698.2] WARNING, no entry stored in dbm for [ENSG00000267080.6] WARNING, no entry stored in dbm for [ENSG00000260896.6] WARNING, no entry stored in dbm for [ENSG00000271579.1] WARNING, no entry stored in dbm for [ENSG00000231453.1] WARNING, no entry stored in dbm for [ENSG00000124224.17] WARNING, no entry stored in dbm for [ENSG00000284639.1] WARNING, no entry stored in dbm for [ENSG00000232677.9] WARNING, no entry stored in dbm for [ENSG00000257038.1] WARNING, no entry stored in dbm for [ENSG00000266373.1] WARNING, no entry stored in dbm for [ENSG00000236304.1] WARNING, no entry stored in dbm for [ENSG00000234509.1] WARNING, no entry stored in dbm for [ENSG00000236375.3] WARNING, no entry stored in dbm for [ENSG00000224309.7] WARNING, no entry stored in dbm for [ENSG00000257331.1] WARNING, no entry stored in dbm for [ENSG00000223837.2] WARNING, no entry stored in dbm for [ENSG00000285799.1] WARNING, no entry stored in dbm for [ENSG00000254741.1] WARNING, no entry stored in dbm for [ENSG00000225096.3] WARNING, no entry stored in dbm for [ENSG00000260404.3] WARNING, no entry stored in dbm for [ENSG00000270066.3] WARNING, no entry stored in dbm for [ENSG00000236713.1] WARNING, no entry stored in dbm for [ENSG00000230628.1] WARNING, no entry stored in dbm for [ENSG00000228436.3] WARNING, no entry stored in dbm for [ENSG00000233379.2] WARNING, no entry stored in dbm for [ENSG00000283078.1] WARNING, no entry stored in dbm for [ENSG00000242888.1] WARNING, no entry stored in dbm for [ENSG00000279253.1] WARNING, no entry stored in dbm for [ENSG00000237686.7] WARNING, no entry stored in dbm for [ENSG00000227486.2] WARNING, no entry stored in dbm for [ENSG00000260464.1] WARNING, no entry stored in dbm for [ENSG00000226310.1] WARNING, no entry stored in dbm for [ENSG00000287920.1] WARNING, no entry stored in dbm for [ENSG00000265018.6] WARNING, no entry stored in dbm for [ENSG00000230869.1] WARNING, no entry stored in dbm for [ENSG00000272140.2] WARNING, no entry stored in dbm for [ENSG00000284620.2] WARNING, no entry stored in dbm for [ENSG00000230590.11] WARNING, no entry stored in dbm for [ENSG00000286912.1] WARNING, no entry stored in dbm for [ENSG00000236438.7] WARNING, no entry stored in dbm for [ENSG00000236438.7] WARNING, no entry stored in dbm for [ENSG00000132204.14] WARNING, no entry stored in dbm for [ENSG00000261499.2] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000239969.5] WARNING, no entry stored in dbm for [ENSG00000247130.2] WARNING, no entry stored in dbm for [ENSG00000180229.12] WARNING, no entry stored in dbm for [ENSG00000238035.8] WARNING, no entry stored in dbm for [ENSG00000283511.1] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000259704.2] WARNING, no entry stored in dbm for [ENSG00000278791.1] WARNING, no entry stored in dbm for [ENSG00000239482.6] WARNING, no entry stored in dbm for [ENSG00000286182.1] WARNING, no entry stored in dbm for [ENSG00000251654.2] WARNING, no entry stored in dbm for [ENSG00000260278.1] WARNING, no entry stored in dbm for [ENSG00000284648.1] WARNING, no entry stored in dbm for [ENSG00000242759.8] WARNING, no entry stored in dbm for [ENSG00000261104.1] WARNING, no entry stored in dbm for [ENSG00000260805.2] WARNING, no entry stored in dbm for [ENSG00000224016.2] WARNING, no entry stored in dbm for [ENSG00000251652.1] WARNING, no entry stored in dbm for [ENSG00000253123.4] WARNING, no entry stored in dbm for [ENSG00000278863.1] WARNING, no entry stored in dbm for [ENSG00000266356.1] WARNING, no entry stored in dbm for [ENSG00000213650.3] WARNING, no entry stored in dbm for [ENSG00000267737.1] WARNING, no entry stored in dbm for [ENSG00000266677.1] WARNING, no entry stored in dbm for [ENSG00000242299.1] WARNING, no entry stored in dbm for [ENSG00000288663.1] WARNING, no entry stored in dbm for [ENSG00000288663.1] WARNING, no entry stored in dbm for [ENSG00000257539.2] WARNING, no entry stored in dbm for [ENSG00000257337.7] WARNING, no entry stored in dbm for [ENSG00000254859.1] WARNING, no entry stored in dbm for [ENSG00000260005.6] WARNING, no entry stored in dbm for [ENSG00000250140.1] WARNING, no entry stored in dbm for [ENSG00000254485.5] WARNING, no entry stored in dbm for [ENSG00000260693.1] WARNING, no entry stored in dbm for [ENSG00000276272.1] WARNING, no entry stored in dbm for [ENSG00000273658.1] WARNING, no entry stored in dbm for [ENSG00000255511.1] WARNING, no entry stored in dbm for [ENSG00000268747.1] WARNING, no entry stored in dbm for [ENSG00000268093.1] WARNING, no entry stored in dbm for [ENSG00000213963.6] WARNING, no entry stored in dbm for [ENSG00000261329.6] WARNING, no entry stored in dbm for [ENSG00000261329.6] WARNING, no entry stored in dbm for [ENSG00000286449.1] WARNING, no entry stored in dbm for [ENSG00000249406.3] WARNING, no entry stored in dbm for [ENSG00000265041.1] WARNING, no entry stored in dbm for [ENSG00000186148.13] WARNING, no entry stored in dbm for [ENSG00000285587.1] WARNING, no entry stored in dbm for [ENSG00000213777.5] WARNING, no entry stored in dbm for [ENSG00000286234.1] WARNING, no entry stored in dbm for [ENSG00000204850.4] WARNING, no entry stored in dbm for [ENSG00000259933.6] WARNING, no entry stored in dbm for [ENSG00000257403.2] WARNING, no entry stored in dbm for [ENSG00000189149.12] WARNING, no entry stored in dbm for [ENSG00000267727.1] WARNING, no entry stored in dbm for [ENSG00000267379.1] WARNING, no entry stored in dbm for [ENSG00000235583.2] WARNING, no entry stored in dbm for [ENSG00000286739.1] WARNING, no entry stored in dbm for [ENSG00000277458.1] WARNING, no entry stored in dbm for [ENSG00000189149.12] WARNING, no entry stored in dbm for [ENSG00000229365.3] WARNING, no entry stored in dbm for [ENSG00000268460.2] WARNING, no entry stored in dbm for [ENSG00000226824.7] WARNING, no entry stored in dbm for [ENSG00000224365.1] WARNING, no entry stored in dbm for [ENSG00000267469.1] WARNING, no entry stored in dbm for [ENSG00000239556.4] WARNING, no entry stored in dbm for [ENSG00000241057.2] WARNING, no entry stored in dbm for [ENSG00000228434.1] WARNING, no entry stored in dbm for [ENSG00000127957.18] WARNING, no entry stored in dbm for [ENSG00000273419.1] WARNING, no entry stored in dbm for [ENSG00000262678.1] WARNING, no entry stored in dbm for [ENSG00000227948.4] WARNING, no entry stored in dbm for [ENSG00000227948.4] WARNING, no entry stored in dbm for [ENSG00000262265.2] WARNING, no entry stored in dbm for [ENSG00000238098.9] WARNING, no entry stored in dbm for [ENSG00000238098.9] WARNING, no entry stored in dbm for [ENSG00000251595.7] WARNING, no entry stored in dbm for [ENSG00000239408.1] * STAR-Fusion complete. See output: /tmp/nxf.m5bFFMSaGF/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)