.command.out - Workdir - NFCORE_RNAFUSION:RNAFUSION:RNA_CONTAMINATION_DETECTION_WORKFLOW:PREDICT_CONTAMINATION (BVT_FFPE_TRNA_brn_01_A23WKFTLT4_3)

File Info

Filename: .command.out
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9e/e536ab4764499e761e028b7f0fc2da/.command.out
Size: 324 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:RNA_CONTAMINATION_DETECTION_WORKFLOW:PREDICT_CONTAMINATION (BVT_FFPE_TRNA_brn_01_A23WKFTLT4_3)
Attempt

Content

Predicting contamination for 1 sample(s)...
Detection threshold: VAF_p90 < 0.9999
Level estimation: contamination_pct = -215.87 * vaf_p90 + 215.65

  BVT_FFPE_TRNA_brn_01_A23WKFTLT4_3: vaf_p90=1.000000 -> CLEAN

Output saved to: BVT_FFPE_TRNA_brn_01_A23WKFTLT4_3.predictions.csv
Summary: 0/1 samples flagged as contaminated