-ctat genome lib [/tmp/nxf.s5icSS8VkF/ctat_genome_lib_build_dir] validates. CMD: mkdir -p /tmp/nxf.s5icSS8VkF/./_starF_checkpoints CMD: mkdir -p /tmp/nxf.s5icSS8VkF/./star-fusion.preliminary -sample contains 73033828 rnaseq fragments * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.s5icSS8VkF/ctat_genome_lib_build_dir -J /tmp/nxf.s5icSS8VkF/BVT_FFPE_TRNA_thy_01_A23WKFTLT4_2.Chimeric.out.junction -O /tmp/nxf.s5icSS8VkF/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 -parsing fusion evidence: /tmp/nxf.s5icSS8VkF/BVT_FFPE_TRNA_thy_01_A23WKFTLT4_2.Chimeric.out.junction -building interval tree based on /tmp/nxf.s5icSS8VkF/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.12 min). -mapping reads to genes [10000], rate=85714.29/min [20000], rate=50000.00/min [30000], rate=42857.14/min [40000], rate=41379.31/min [50000], rate=41095.89/min [60000], rate=40909.09/min [70000], rate=40384.62/min [80000], rate=41025.64/min [90000], rate=41221.37/min [100000], rate=42553.19/min [110000], rate=43708.61/min [120000], rate=44444.44/min [130000], rate=44067.80/min [140000], rate=44444.44/min [150000], rate=44776.12/min [160000], rate=45497.63/min [170000], rate=45333.33/min [180000], rate=46351.93/min [190000], rate=46530.61/min [200000], rate=46875.00/min [210000], rate=47368.42/min [220000], rate=47653.43/min [230000], rate=48251.75/min [240000], rate=49146.76/min [250000], rate=50167.22/min [260000], rate=50814.33/min [270000], rate=51428.57/min [280000], rate=52012.38/min [290000], rate=52887.54/min [300000], rate=53412.46/min [310000], rate=53602.31/min [320000], rate=54084.51/min [330000], rate=54545.45/min [340000], rate=55284.55/min [350000], rate=55702.92/min [360000], rate=56250.00/min [370000], rate=56923.08/min [380000], rate=57430.73/min [390000], rate=58208.96/min [400000], rate=59553.35/min [410000], rate=60294.12/min [420000], rate=60869.57/min [430000], rate=61722.49/min [440000], rate=62857.14/min [450000], rate=64133.02/min [460000], rate=65402.84/min [470000], rate=66666.67/min [480000], rate=67764.71/min [490000], rate=69014.08/min [500000], rate=69444.44/min [510000], rate=70344.83/min [520000], rate=71724.14/min [530000], rate=72935.78/min [540000], rate=73469.39/min [550000], rate=73660.71/min [560000], rate=74501.11/min [570000], rate=74672.49/min [580000], rate=75000.00/min [590000], rate=76129.03/min [600000], rate=76759.06/min [610000], rate=77215.19/min [620000], rate=77500.00/min [630000], rate=78260.87/min [640000], rate=79338.84/min [650000], rate=80246.91/min [660000], rate=81481.48/min [670000], rate=82546.20/min [680000], rate=83435.58/min [690000], rate=83805.67/min [700000], rate=84337.35/min [710000], rate=85542.17/min [720000], rate=86573.15/min [730000], rate=86732.67/min [740000], rate=87401.57/min [750000], rate=88408.64/min [760000], rate=88543.69/min [770000], rate=88675.62/min [780000], rate=89312.98/min [790000], rate=90285.71/min [800000], rate=91081.59/min [810000], rate=92045.45/min [820000], rate=93005.67/min [830000], rate=93962.26/min [840000], rate=94559.10/min [850000], rate=94619.67/min [860000], rate=95555.56/min [870000], rate=96487.99/min [880000], rate=97058.82/min [890000], rate=97267.76/min [900000], rate=97649.19/min [910000], rate=98555.96/min [920000], rate=99459.46/min [930000], rate=100540.54/min [940000], rate=100534.76/min [950000], rate=100175.75/min [960000], rate=101052.63/min [970000], rate=101570.68/min [980000], rate=101554.40/min [990000], rate=101712.33/min [1000000], rate=101180.44/min [1010000], rate=101677.85/min [1020000], rate=102684.56/min [1030000], rate=103171.95/min [1040000], rate=103311.26/min [1050000], rate=103278.69/min [1060000], rate=103583.06/min [1070000], rate=103381.64/min [1080000], rate=103184.71/min [1090000], rate=103154.57/min [1100000], rate=103125.00/min [1110000], rate=102777.78/min [1120000], rate=102283.11/min [1130000], rate=101954.89/min [1140000], rate=101785.71/min [1150000], rate=101620.03/min [1160000], rate=101457.73/min [1170000], rate=101445.09/min [1180000], rate=100998.57/min [1190000], rate=99442.90/min [1200000], rate=98226.47/min -building interval tree based on /tmp/nxf.s5icSS8VkF/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.12 min). -mapping reads to genes [10000], rate=100000.00/min [20000], rate=120000.00/min [30000], rate=180000.00/min [40000], rate=141176.47/min [50000], rate=136363.64/min [60000], rate=128571.43/min [70000], rate=107692.31/min [80000], rate=117073.17/min [90000], rate=131707.32/min [100000], rate=133333.33/min [110000], rate=134693.88/min [120000], rate=141176.47/min [130000], rate=152941.18/min [140000], rate=161538.46/min [150000], rate=169811.32/min [160000], rate=160000.00/min [170000], rate=161904.76/min [180000], rate=171428.57/min [190000], rate=167647.06/min [200000], rate=166666.67/min [210000], rate=165789.47/min [220000], rate=159036.14/min [230000], rate=164285.71/min [240000], rate=171428.57/min [250000], rate=172413.79/min [260000], rate=169565.22/min [270000], rate=174193.55/min [280000], rate=178723.40/min [290000], rate=185106.38/min [300000], rate=187500.00/min [310000], rate=184158.42/min [320000], rate=181132.08/min [330000], rate=186792.45/min [340000], rate=185454.55/min [350000], rate=182608.70/min [360000], rate=183050.85/min [370000], rate=185000.00/min [380000], rate=185365.85/min [390000], rate=185714.29/min [400000], rate=186046.51/min [410000], rate=180882.35/min [420000], rate=178723.40/min [430000], rate=181690.14/min [440000], rate=183333.33/min [450000], rate=182432.43/min [460000], rate=182781.46/min [470000], rate=183116.88/min [480000], rate=178881.99/min [490000], rate=180368.10/min [500000], rate=182926.83/min [510000], rate=180000.00/min [520000], rate=179310.34/min [530000], rate=180681.82/min [540000], rate=182022.47/min [550000], rate=182320.44/min [560000], rate=181621.62/min [570000], rate=180952.38/min [580000], rate=177551.02/min [590000], rate=179695.43/min [600000], rate=181818.18/min [610000], rate=181188.12/min [620000], rate=180582.52/min [630000], rate=180861.24/min [640000], rate=167685.59/min [650000], rate=156626.51/min [660000], rate=147211.90/min [670000], rate=139100.35/min [680000], rate=132467.53/min [690000], rate=125835.87/min [700000], rate=120343.84/min [710000], rate=116076.29/min [720000], rate=111917.10/min [730000], rate=108148.15/min [740000], rate=105213.27/min [750000], rate=102974.83/min [760000], rate=100884.96/min [770000], rate=98717.95/min [780000], rate=97297.30/min [790000], rate=95757.58/min [800000], rate=94488.19/min [810000], rate=93103.45/min [820000], rate=92134.83/min [830000], rate=91208.79/min [840000], rate=90322.58/min [850000], rate=89473.68/min [860000], rate=88659.79/min [870000], rate=88026.98/min [880000], rate=87707.64/min [890000], rate=87397.71/min [900000], rate=87237.48/min [910000], rate=86942.68/min [920000], rate=86929.13/min [930000], rate=86915.89/min [940000], rate=86902.93/min [950000], rate=86494.69/min [960000], rate=85842.03/min [970000], rate=85462.56/min [980000], rate=85094.07/min [990000], rate=84736.09/min [1000000], rate=84507.04/min [1010000], rate=84401.11/min [1020000], rate=84297.52/min [1030000], rate=84311.05/min [1040000], rate=84324.32/min [1050000], rate=84450.40/min [1060000], rate=84126.98/min [1070000], rate=83268.48/min [1080000], rate=82442.75/min [1090000], rate=81852.32/min [1100000], rate=81180.81/min [1110000], rate=80629.54/min [1120000], rate=80382.78/min [1130000], rate=79952.83/min [1140000], rate=79534.88/min [1150000], rate=79128.44/min [1160000], rate=78822.20/min [1170000], rate=78699.55/min [1180000], rate=78579.36/min [1190000], rate=78547.85/min -building interval tree based on /tmp/nxf.s5icSS8VkF/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.12 min). -mapping reads to genes [10000], rate=40000.00/min [20000], rate=37500.00/min [30000], rate=37500.00/min [40000], rate=40000.00/min [50000], rate=42253.52/min [60000], rate=43902.44/min [70000], rate=46153.85/min [80000], rate=47524.75/min [90000], rate=49090.91/min [100000], rate=51282.05/min [110000], rate=53225.81/min [120000], rate=55384.62/min [130000], rate=56115.11/min [140000], rate=55263.16/min [150000], rate=54878.05/min [160000], rate=54545.45/min [170000], rate=53684.21/min [180000], rate=53465.35/min [190000], rate=54028.44/min [200000], rate=54545.45/min [210000], rate=55263.16/min [220000], rate=56170.21/min [230000], rate=57261.41/min [240000], rate=57142.86/min [250000], rate=56818.18/min [260000], rate=56521.74/min [270000], rate=56250.00/min [280000], rate=56000.00/min [290000], rate=55948.55/min [300000], rate=56074.77/min [310000], rate=56193.35/min [320000], rate=56804.73/min [330000], rate=57225.43/min [340000], rate=57790.37/min [350000], rate=58333.33/min [360000], rate=58695.65/min [370000], rate=59358.29/min [380000], rate=59842.52/min [390000], rate=60465.12/min [400000], rate=60759.49/min [410000], rate=60294.12/min [420000], rate=59857.48/min [430000], rate=59584.30/min [440000], rate=58928.57/min [450000], rate=58315.33/min [460000], rate=57983.19/min [470000], rate=57786.89/min [480000], rate=57370.52/min [490000], rate=57309.94/min [500000], rate=57361.38/min [510000], rate=57410.88/min [520000], rate=57564.58/min [530000], rate=58241.76/min [540000], rate=58589.51/min [550000], rate=59033.99/min [560000], rate=59469.03/min [570000], rate=59685.86/min [580000], rate=59284.50/min [590000], rate=58803.99/min [600000], rate=58631.92/min [610000], rate=58560.00/min [620000], rate=58398.74/min [630000], rate=58333.33/min [640000], rate=58270.11/min [650000], rate=58208.96/min [660000], rate=58149.78/min [670000], rate=58260.87/min [680000], rate=58452.72/min [690000], rate=58640.23/min [700000], rate=58823.53/min [710000], rate=59002.77/min [720000], rate=59340.66/min [730000], rate=59673.02/min [740000], rate=60000.00/min [750000], rate=59920.11/min [760000], rate=59764.09/min [770000], rate=59767.14/min [780000], rate=59617.83/min [790000], rate=59622.64/min [800000], rate=59701.49/min [810000], rate=59852.22/min [820000], rate=60073.26/min [830000], rate=60290.56/min [840000], rate=60504.20/min [850000], rate=60642.09/min [860000], rate=60920.90/min [870000], rate=61124.12/min [880000], rate=61610.27/min [890000], rate=62093.02/min [900000], rate=62572.42/min [910000], rate=62903.23/min [920000], rate=63085.71/min [930000], rate=62979.68/min [940000], rate=62666.67/min [950000], rate=62568.61/min [960000], rate=62337.66/min [970000], rate=62113.13/min [980000], rate=62090.81/min [990000], rate=62068.97/min [1000000], rate=62176.17/min [1010000], rate=62345.68/min [1020000], rate=62704.92/min [1030000], rate=63254.86/min [1040000], rate=63673.47/min [1050000], rate=63894.52/min [1060000], rate=64112.90/min [1070000], rate=64071.86/min [1080000], rate=64158.42/min [1090000], rate=64306.78/min [1100000], rate=64390.24/min [1110000], rate=64410.06/min [1120000], rate=64553.31/min [1130000], rate=64756.45/min [1140000], rate=64895.64/min [1150000], rate=65032.99/min [1160000], rate=65229.62/min [1170000], rate=65668.85/min [1180000], rate=65983.22/min [1190000], rate=66172.38/min -building interval tree based on /tmp/nxf.s5icSS8VkF/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.10 min). -mapping reads to genes [10000], rate=85714.29/min [20000], rate=70588.24/min [30000], rate=48648.65/min [40000], rate=46153.85/min [50000], rate=45454.55/min [60000], rate=46153.85/min [70000], rate=45652.17/min [80000], rate=46153.85/min [90000], rate=46551.72/min [100000], rate=46875.00/min [110000], rate=47826.09/min [120000], rate=48322.15/min [130000], rate=49056.60/min [140000], rate=50000.00/min [150000], rate=51724.14/min [160000], rate=52747.25/min [170000], rate=54255.32/min [180000], rate=55102.04/min [190000], rate=55609.76/min [200000], rate=56338.03/min [210000], rate=57534.25/min [220000], rate=58666.67/min [230000], rate=59740.26/min [240000], rate=58775.51/min [250000], rate=58593.75/min [260000], rate=58426.97/min [270000], rate=58483.75/min [280000], rate=58536.59/min [290000], rate=58983.05/min [300000], rate=59602.65/min [310000], rate=60389.61/min [320000], rate=60952.38/min [330000], rate=62264.15/min [340000], rate=63157.89/min [350000], rate=64417.18/min [360000], rate=65454.55/min [370000], rate=66467.07/min [380000], rate=67256.64/min [390000], rate=68221.57/min [400000], rate=69364.16/min [410000], rate=69886.36/min [420000], rate=69041.10/min [430000], rate=68617.02/min [440000], rate=68041.24/min [450000], rate=67669.17/min [460000], rate=67317.07/min [470000], rate=67303.10/min [480000], rate=67447.31/min [490000], rate=67586.21/min [500000], rate=68027.21/min [510000], rate=67699.12/min [520000], rate=66809.42/min [530000], rate=67088.61/min [540000], rate=67219.92/min [550000], rate=66265.06/min [560000], rate=65369.65/min [570000], rate=64895.64/min [580000], rate=64564.01/min [590000], rate=64246.82/min [600000], rate=64056.94/min [610000], rate=63874.35/min [620000], rate=63917.53/min [630000], rate=63851.35/min [640000], rate=63787.38/min [650000], rate=63517.92/min [660000], rate=63461.54/min [670000], rate=63406.94/min [680000], rate=63452.57/min [690000], rate=63692.31/min [700000], rate=63829.79/min [710000], rate=64253.39/min [720000], rate=64573.99/min [730000], rate=63848.40/min [740000], rate=63247.86/min [750000], rate=62937.06/min [760000], rate=62637.36/min [770000], rate=62264.15/min [780000], rate=62068.97/min [790000], rate=61799.22/min [800000], rate=61617.46/min [810000], rate=61441.21/min [820000], rate=61423.22/min [830000], rate=61481.48/min [840000], rate=61538.46/min [850000], rate=61668.68/min [860000], rate=61575.18/min [870000], rate=61411.76/min [880000], rate=61538.46/min [890000], rate=61662.82/min [900000], rate=61714.29/min [910000], rate=61904.76/min [920000], rate=62092.24/min [930000], rate=62207.36/min [940000], rate=62527.72/min [950000], rate=63053.10/min [960000], rate=63576.16/min [970000], rate=63745.89/min [980000], rate=63913.04/min [990000], rate=64216.22/min [1000000], rate=63829.79/min [1010000], rate=63522.01/min [1020000], rate=63027.81/min [1030000], rate=62613.98/min [1040000], rate=62525.05/min [1050000], rate=62438.06/min [1060000], rate=62170.09/min [1070000], rate=62088.97/min [1080000], rate=62009.57/min [1090000], rate=61931.82/min [1100000], rate=61855.67/min [1110000], rate=61895.91/min [1120000], rate=61821.53/min [1130000], rate=61804.92/min [1140000], rate=61844.48/min [1150000], rate=61938.96/min [1160000], rate=62142.86/min [1170000], rate=62344.58/min [1180000], rate=62378.85/min [1190000], rate=62467.19/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.s5icSS8VkF/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.s5icSS8VkF/ctat_genome_lib_build_dir --filt_file /tmp/nxf.s5icSS8VkF/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.s5icSS8VkF/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -parsing /tmp/nxf.s5icSS8VkF/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info. 6000000.00 reads per min processed... 6000000.00 reads per min processed... 9000000.00 reads per min processed... 8000000.00 reads per min processed... 10000000.00 reads per min processed... 9000000.00 reads per min processed... 7000000.00 reads per min processed... 6000000.00 reads per min processed... 5400000.00 reads per min processed... 5000000.00 reads per min processed... 5076923.08 reads per min processed... 4800000.00 reads per min processed... 4588235.29 reads per min processed... 4421052.63 reads per min processed... 4285714.29 reads per min processed... 4173913.04 reads per min processed... 4080000.00 reads per min processed... 4153846.15 reads per min processed... 4071428.57 reads per min processed... 4000000.00 reads per min processed... 4064516.13 reads per min processed... 4000000.00 reads per min processed... 3942857.14 reads per min processed... 4000000.00 reads per min processed... 4166666.67 reads per min processed... 4216216.22 reads per min processed... 4378378.38 reads per min processed... 4421052.63 reads per min processed... 4461538.46 reads per min processed... 4500000.00 reads per min processed... 4536585.37 reads per min processed... 4465116.28 reads per min processed... 4500000.00 reads per min processed... 4434782.61 reads per min processed... 4468085.11 reads per min processed... 4408163.27 reads per min processed... 4440000.00 reads per min processed... 4470588.24 reads per min processed... 4415094.34 reads per min processed... 4444444.44 reads per min processed... done. * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.s5icSS8VkF/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.s5icSS8VkF/./star-fusion.preliminary/star-fusion -parsing fusion evidence: /tmp/nxf.s5icSS8VkF/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -outputting fusion candidates to file: /tmp/nxf.s5icSS8VkF/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.s5icSS8VkF/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.s5icSS8VkF/BVT_FFPE_TRNA_thy_01_A23WKFTLT4_2.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.s5icSS8VkF/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.s5icSS8VkF/./star-fusion.preliminary/star-fusion CMD: mkdir -p /tmp/nxf.s5icSS8VkF/./star-fusion.preliminary/star-fusion.filter.intermediates_dir EM: Starting log likelihood: -97013.996866 EM: Round [1] log likelihood: -96884.381665 EM: Round [2] log likelihood: -96838.039403 EM: Round [3] log likelihood: -96815.631286 EM: Round [4] log likelihood: -96803.416671 EM: Round [5] log likelihood: -96796.411691 EM: Round [6] log likelihood: -96792.255037 EM: Round [7] log likelihood: -96789.701982 EM: Round [8] log likelihood: -96788.075297 EM: Round [9] log likelihood: -96787.000263 EM: Round [10] log likelihood: -96786.265020 EM: Round [11] log likelihood: -96785.746411 EM: Round [12] log likelihood: -96785.370563 EM: Round [13] log likelihood: -96785.091706 EM: Round [14] log likelihood: -96784.880571 EM: Round [15] log likelihood: -96784.717875 EM: Round [16] log likelihood: -96784.590562 EM: Round [17] log likelihood: -96784.489574 EM: Round [18] log likelihood: -96784.408487 EM: Round [19] log likelihood: -96784.342660 EM: Round [20] log likelihood: -96784.288679 EM: Round [21] log likelihood: -96784.244001 EM: Round [22] log likelihood: -96784.206703 EM: Round [23] log likelihood: -96784.175314 EM: Round [24] log likelihood: -96784.148696 EM: Round [25] log likelihood: -96784.125965 EM: Round [26] log likelihood: -96784.106422 EM: Round [27] log likelihood: -96784.089512 EM: Round [28] log likelihood: -96784.074793 EM: Round [29] log likelihood: -96784.061909 EM: Round [30] log likelihood: -96784.050570 EM: Round [31] log likelihood: -96784.040540 EM: Round [32] log likelihood: -96784.031626 EM: Round [33] log likelihood: -96784.023668 EM: Round [34] log likelihood: -96784.016534 EM: Round [35] log likelihood: -96784.010112 EM: Round [36] log likelihood: -96784.004311 EM: Round [37] log likelihood: -96783.999052 EM: Round [38] log likelihood: -96783.994270 EM: Round [39] log likelihood: -96783.989908 EM: Round [40] log likelihood: -96783.985919 EM: Round [41] log likelihood: -96783.982261 EM: Round [42] log likelihood: -96783.978899 EM: Round [43] log likelihood: -96783.975803 EM: Round [44] log likelihood: -96783.972946 EM: Round [45] log likelihood: -96783.970305 EM: Round [46] log likelihood: -96783.967859 EM: Round [47] log likelihood: -96783.965591 EM: Round [48] log likelihood: -96783.963485 EM: Round [49] log likelihood: -96783.961527 EM: Round [50] log likelihood: -96783.959704 EM: Round [51] log likelihood: -96783.958005 EM: Round [52] log likelihood: -96783.956421 EM: Round [53] log likelihood: -96783.954943 EM: Round [54] log likelihood: -96783.953561 EM: Round [55] log likelihood: -96783.952270 EM: Round [56] log likelihood: -96783.951062 EM: Round [57] log likelihood: -96783.949931 EM: Round [58] log likelihood: -96783.948871 EM: Round [59] log likelihood: -96783.947879 EM: Round [60] log likelihood: -96783.946948 EM: Round [61] log likelihood: -96783.946076 EM: Round [62] log likelihood: -96783.945257 EM: Round [63] log likelihood: -96783.944488 EM: Round [64] log likelihood: -96783.943766 EM: Round [65] log likelihood: -96783.943088 EM: Round [66] log likelihood: -96783.942450 EM: Round [67] log likelihood: -96783.941851 EM: Round [68] log likelihood: -96783.941288 EM: Round [69] log likelihood: -96783.940758 EM: Round [70] log likelihood: -96783.940259 EM: Round [71] log likelihood: -96783.939790 EM: Round [72] log likelihood: -96783.939348 EM: Round [73] log likelihood: -96783.938932 EM: Round [74] log likelihood: -96783.938540 EM: Round [75] log likelihood: -96783.938171 EM: Round [76] log likelihood: -96783.937823 EM: Round [77] log likelihood: -96783.937495 EM: Round [78] log likelihood: -96783.937186 EM: Round [79] log likelihood: -96783.936894 EM: Round [80] log likelihood: -96783.936619 EM: Round [81] log likelihood: -96783.936359 EM: Round [82] log likelihood: -96783.936114 EM: Round [83] log likelihood: -96783.935883 EM: Round [84] log likelihood: -96783.935664 EM: Round [85] log likelihood: -96783.935458 EM: Round [86] log likelihood: -96783.935262 EM: Round [87] log likelihood: -96783.935078 EM: Round [88] log likelihood: -96783.934904 EM: Round [89] log likelihood: -96783.934739 EM: Round [90] log likelihood: -96783.934583 EM: Round [91] log likelihood: -96783.934435 EM: Round [92] log likelihood: -96783.934295 EM: Round [93] log likelihood: -96783.934163 EM: Round [94] log likelihood: -96783.934038 EM: Round [95] log likelihood: -96783.933919 EM: Round [96] log likelihood: -96783.933807 EM: Round [97] log likelihood: -96783.933700 EM: Round [98] log likelihood: -96783.933599 EM: Round [99] log likelihood: -96783.933503 EM: Stopping iterations at round 99 due to insufficient improvement in likelihood. EM: Starting log likelihood: -96728.015572 EM: Round [1] log likelihood: -96617.558677 EM: Round [2] log likelihood: -96577.913191 EM: Round [3] log likelihood: -96559.144500 EM: Round [4] log likelihood: -96549.129935 EM: Round [5] log likelihood: -96543.475823 EM: Round [6] log likelihood: -96540.154305 EM: Round [7] log likelihood: -96538.127551 EM: Round [8] log likelihood: -96536.842738 EM: Round [9] log likelihood: -96535.997711 EM: Round [10] log likelihood: -96535.422706 EM: Round [11] log likelihood: -96535.019323 EM: Round [12] log likelihood: -96534.728626 EM: Round [13] log likelihood: -96534.514144 EM: Round [14] log likelihood: -96534.352595 EM: Round [15] log likelihood: -96534.228681 EM: Round [16] log likelihood: -96534.132083 EM: Round [17] log likelihood: -96534.055679 EM: Round [18] log likelihood: -96533.994444 EM: Round [19] log likelihood: -96533.944772 EM: Round [20] log likelihood: -96533.904031 EM: Round [21] log likelihood: -96533.870270 EM: Round [22] log likelihood: -96533.842025 EM: Round [23] log likelihood: -96533.818185 EM: Round [24] log likelihood: -96533.797894 EM: Round [25] log likelihood: -96533.780491 EM: Round [26] log likelihood: -96533.765455 EM: Round [27] log likelihood: -96533.752376 EM: Round [28] log likelihood: -96533.740928 EM: Round [29] log likelihood: -96533.730848 EM: Round [30] log likelihood: -96533.721923 EM: Round [31] log likelihood: -96533.713980 EM: Round [32] log likelihood: -96533.706877 EM: Round [33] log likelihood: -96533.700498 EM: Round [34] log likelihood: -96533.694744 EM: Round [35] log likelihood: -96533.689536 EM: Round [36] log likelihood: -96533.684804 EM: Round [37] log likelihood: -96533.680492 EM: Round [38] log likelihood: -96533.676550 EM: Round [39] log likelihood: -96533.672937 EM: Round [40] log likelihood: -96533.669617 EM: Round [41] log likelihood: -96533.666561 EM: Round [42] log likelihood: -96533.663740 EM: Round [43] log likelihood: -96533.661133 EM: Round [44] log likelihood: -96533.658719 EM: Round [45] log likelihood: -96533.656480 EM: Round [46] log likelihood: -96533.654401 EM: Round [47] log likelihood: -96533.652469 EM: Round [48] log likelihood: -96533.650670 EM: Round [49] log likelihood: -96533.648994 EM: Round [50] log likelihood: -96533.647432 EM: Round [51] log likelihood: -96533.645974 EM: Round [52] log likelihood: -96533.644612 EM: Round [53] log likelihood: -96533.643340 EM: Round [54] log likelihood: -96533.642151 EM: Round [55] log likelihood: -96533.641038 EM: Round [56] log likelihood: -96533.639997 EM: Round [57] log likelihood: -96533.639022 EM: Round [58] log likelihood: -96533.638109 EM: Round [59] log likelihood: -96533.637254 EM: Round [60] log likelihood: -96533.636452 EM: Round [61] log likelihood: -96533.635701 EM: Round [62] log likelihood: -96533.634996 EM: Round [63] log likelihood: -96533.634336 EM: Round [64] log likelihood: -96533.633716 EM: Round [65] log likelihood: -96533.633134 EM: Round [66] log likelihood: -96533.632588 EM: Round [67] log likelihood: -96533.632076 EM: Round [68] log likelihood: -96533.631596 EM: Round [69] log likelihood: -96533.631144 EM: Round [70] log likelihood: -96533.630720 EM: Round [71] log likelihood: -96533.630322 EM: Round [72] log likelihood: -96533.629948 EM: Round [73] log likelihood: -96533.629597 EM: Round [74] log likelihood: -96533.629267 EM: Round [75] log likelihood: -96533.628957 EM: Round [76] log likelihood: -96533.628665 EM: Round [77] log likelihood: -96533.628392 EM: Round [78] log likelihood: -96533.628134 EM: Round [79] log likelihood: -96533.627892 EM: Round [80] log likelihood: -96533.627664 EM: Round [81] log likelihood: -96533.627450 EM: Round [82] log likelihood: -96533.627249 EM: Round [83] log likelihood: -96533.627060 EM: Round [84] log likelihood: -96533.626882 EM: Round [85] log likelihood: -96533.626714 EM: Round [86] log likelihood: -96533.626557 EM: Round [87] log likelihood: -96533.626409 EM: Round [88] log likelihood: -96533.626269 EM: Round [89] log likelihood: -96533.626138 EM: Round [90] log likelihood: -96533.626014 EM: Round [91] log likelihood: -96533.625898 EM: Round [92] log likelihood: -96533.625788 EM: Round [93] log likelihood: -96533.625685 EM: Round [94] log likelihood: -96533.625588 EM: Stopping iterations at round 94 due to insufficient improvement in likelihood. CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.s5icSS8VkF/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.s5icSS8VkF/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.s5icSS8VkF/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.s5icSS8VkF/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.s5icSS8VkF/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.s5icSS8VkF/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.s5icSS8VkF/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20 CMD: cp /tmp/nxf.s5icSS8VkF/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.s5icSS8VkF/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.s5icSS8VkF/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.s5icSS8VkF/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged CMD: ln -sf /tmp/nxf.s5icSS8VkF/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.s5icSS8VkF/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered * Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.s5icSS8VkF/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 73033828 > /tmp/nxf.s5icSS8VkF/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM * Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.s5icSS8VkF/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.s5icSS8VkF/ctat_genome_lib_build_dir > /tmp/nxf.s5icSS8VkF/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.s5icSS8VkF/ctat_genome_lib_build_dir --annotate /tmp/nxf.s5icSS8VkF/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.s5icSS8VkF/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot * Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.s5icSS8VkF/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.s5icSS8VkF/ctat_genome_lib_build_dir -done, see /tmp/nxf.s5icSS8VkF/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass * Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.s5icSS8VkF/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.s5icSS8VkF/ctat_genome_lib_build_dir -filter_likely_RT_artifacts: (pass: 794, filtered: 6434) * Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.s5icSS8VkF/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001 * Running CMD: cp /tmp/nxf.s5icSS8VkF/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv * Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.s5icSS8VkF/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv WARNING, no entry stored in dbm for [ENSG00000203635.2] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000229739.4] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000243753.5] WARNING, no entry stored in dbm for [ENSG00000181126.13] WARNING, no entry stored in dbm for [ENSG00000287721.1] WARNING, no entry stored in dbm for [ENSG00000237773.7] WARNING, no entry stored in dbm for [ENSG00000234715.2] WARNING, no entry stored in dbm for [ENSG00000229930.1] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000284977.2] WARNING, no entry stored in dbm for [ENSG00000117242.7] WARNING, no entry stored in dbm for [ENSG00000225482.1] WARNING, no entry stored in dbm for [ENSG00000274602.5] WARNING, no entry stored in dbm for [ENSG00000181577.16] WARNING, no entry stored in dbm for [ENSG00000276735.1] WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000241735.2] WARNING, no entry stored in dbm for [ENSG00000272692.2] WARNING, no entry stored in dbm for [ENSG00000232599.1] WARNING, no entry stored in dbm for [ENSG00000266920.1] WARNING, no entry stored in dbm for [ENSG00000267605.7] WARNING, no entry stored in dbm for [ENSG00000229124.7] WARNING, no entry stored in dbm for [ENSG00000225594.1] WARNING, no entry stored in dbm for [ENSG00000234420.7] WARNING, no entry stored in dbm for [ENSG00000228065.11] WARNING, no entry stored in dbm for [ENSG00000204789.4] WARNING, no entry stored in dbm for [ENSG00000235534.1] WARNING, no entry stored in dbm for [ENSG00000161912.18] WARNING, no entry stored in dbm for [ENSG00000180610.10] WARNING, no entry stored in dbm for [ENSG00000196295.12] WARNING, no entry stored in dbm for [ENSG00000250802.7] WARNING, no entry stored in dbm for [ENSG00000236190.1] WARNING, no entry stored in dbm for [ENSG00000241743.4] WARNING, no entry stored in dbm for [ENSG00000251393.4] WARNING, no entry stored in dbm for [ENSG00000250071.1] WARNING, no entry stored in dbm for [ENSG00000283972.1] WARNING, no entry stored in dbm for [ENSG00000228074.1] WARNING, no entry stored in dbm for [ENSG00000197320.5] WARNING, no entry stored in dbm for [ENSG00000258365.1] WARNING, no entry stored in dbm for [ENSG00000234394.8] WARNING, no entry stored in dbm for [ENSG00000258905.1] WARNING, no entry stored in dbm for [ENSG00000232894.1] WARNING, no entry stored in dbm for [ENSG00000276047.1] WARNING, no entry stored in dbm for [ENSG00000232600.3] WARNING, no entry stored in dbm for [ENSG00000235519.3] WARNING, no entry stored in dbm for [ENSG00000225366.4] WARNING, no entry stored in dbm for [ENSG00000277022.1] WARNING, no entry stored in dbm for [ENSG00000255041.1] WARNING, no entry stored in dbm for [ENSG00000238554.1] WARNING, no entry stored in dbm for [ENSG00000258302.2] WARNING, no entry stored in dbm for [ENSG00000270112.4] WARNING, no entry stored in dbm for [ENSG00000237068.1] WARNING, no entry stored in dbm for [ENSG00000285652.1] WARNING, no entry stored in dbm for [ENSG00000275549.1] WARNING, no entry stored in dbm for [ENSG00000279569.1] WARNING, no entry stored in dbm for [ENSG00000212855.5] WARNING, no entry stored in dbm for [ENSG00000287299.1] WARNING, no entry stored in dbm for [ENSG00000267122.1] WARNING, no entry stored in dbm for [ENSG00000233399.2] WARNING, no entry stored in dbm for [ENSG00000242808.10] WARNING, no entry stored in dbm for [ENSG00000224078.15] WARNING, no entry stored in dbm for [ENSG00000260727.2] WARNING, no entry stored in dbm for [ENSG00000254738.1] WARNING, no entry stored in dbm for [ENSG00000253366.3] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000287411.1] WARNING, no entry stored in dbm for [ENSG00000249167.2] WARNING, no entry stored in dbm for [ENSG00000218048.2] WARNING, no entry stored in dbm for [ENSG00000219463.1] WARNING, no entry stored in dbm for [ENSG00000230116.1] WARNING, no entry stored in dbm for [ENSG00000230629.2] WARNING, no entry stored in dbm for [ENSG00000259121.2] WARNING, no entry stored in dbm for [ENSG00000249584.1] WARNING, no entry stored in dbm for [ENSG00000251474.6] WARNING, no entry stored in dbm for [ENSG00000213872.3] WARNING, no entry stored in dbm for [ENSG00000236848.2] WARNING, no entry stored in dbm for [ENSG00000235315.2] WARNING, no entry stored in dbm for [ENSG00000237745.1] WARNING, no entry stored in dbm for [ENSG00000230171.1] WARNING, no entry stored in dbm for [ENSG00000200296.1] WARNING, no entry stored in dbm for [ENSG00000239899.3] WARNING, no entry stored in dbm for [ENSG00000239899.3] WARNING, no entry stored in dbm for [ENSG00000243352.3] WARNING, no entry stored in dbm for [ENSG00000241162.3] WARNING, no entry stored in dbm for [ENSG00000230399.1] WARNING, no entry stored in dbm for [ENSG00000246100.4] WARNING, no entry stored in dbm for [ENSG00000241472.7] WARNING, no entry stored in dbm for [ENSG00000257599.3] WARNING, no entry stored in dbm for [ENSG00000223409.1] WARNING, no entry stored in dbm for [ENSG00000270025.2] WARNING, no entry stored in dbm for [ENSG00000231503.4] WARNING, no entry stored in dbm for [ENSG00000229083.1] WARNING, no entry stored in dbm for [ENSG00000217539.2] WARNING, no entry stored in dbm for [ENSG00000278231.1] WARNING, no entry stored in dbm for [ENSG00000237888.1] WARNING, no entry stored in dbm for [ENSG00000224897.8] WARNING, no entry stored in dbm for [ENSG00000180747.15] WARNING, no entry stored in dbm for [ENSG00000228546.2] WARNING, no entry stored in dbm for [ENSG00000250778.1] WARNING, no entry stored in dbm for [ENSG00000266931.2] WARNING, no entry stored in dbm for [ENSG00000285955.1] WARNING, no entry stored in dbm for [ENSG00000281880.2] WARNING, no entry stored in dbm for [ENSG00000225683.6] WARNING, no entry stored in dbm for [ENSG00000259493.2] WARNING, no entry stored in dbm for [ENSG00000230131.6] WARNING, no entry stored in dbm for [ENSG00000197085.11] WARNING, no entry stored in dbm for [ENSG00000214807.2] WARNING, no entry stored in dbm for [ENSG00000226703.1] WARNING, no entry stored in dbm for [ENSG00000269821.1] WARNING, no entry stored in dbm for [ENSG00000245532.9] WARNING, no entry stored in dbm for [ENSG00000245532.9] WARNING, no entry stored in dbm for [ENSG00000227733.10] WARNING, no entry stored in dbm for [ENSG00000002079.14] WARNING, no entry stored in dbm for [ENSG00000270780.1] WARNING, no entry stored in dbm for [ENSG00000224078.15] WARNING, no entry stored in dbm for [ENSG00000231831.1] WARNING, no entry stored in dbm for [ENSG00000205361.8] WARNING, no entry stored in dbm for [ENSG00000258610.1] WARNING, no entry stored in dbm for [ENSG00000203709.12] WARNING, no entry stored in dbm for [ENSG00000233230.1] WARNING, no entry stored in dbm for [ENSG00000197320.5] WARNING, no entry stored in dbm for [ENSG00000236595.1] WARNING, no entry stored in dbm for [ENSG00000207441.1] WARNING, no entry stored in dbm for [ENSG00000251432.7] WARNING, no entry stored in dbm for [ENSG00000267083.1] WARNING, no entry stored in dbm for [ENSG00000249184.2] WARNING, no entry stored in dbm for [ENSG00000236914.4] WARNING, no entry stored in dbm for [ENSG00000204338.8] WARNING, no entry stored in dbm for [ENSG00000223914.4] WARNING, no entry stored in dbm for [ENSG00000189238.6] WARNING, no entry stored in dbm for [ENSG00000241288.8] WARNING, no entry stored in dbm for [ENSG00000248238.2] WARNING, no entry stored in dbm for [ENSG00000236008.3] WARNING, no entry stored in dbm for [ENSG00000226029.1] WARNING, no entry stored in dbm for [ENSG00000260440.3] WARNING, no entry stored in dbm for [ENSG00000237339.5] WARNING, no entry stored in dbm for [ENSG00000229891.2] WARNING, no entry stored in dbm for [ENSG00000224405.1] WARNING, no entry stored in dbm for [ENSG00000229373.9] WARNING, no entry stored in dbm for [ENSG00000272763.1] WARNING, no entry stored in dbm for [ENSG00000233930.4] WARNING, no entry stored in dbm for [ENSG00000245648.2] WARNING, no entry stored in dbm for [ENSG00000287092.1] WARNING, no entry stored in dbm for [ENSG00000267100.1] WARNING, no entry stored in dbm for [ENSG00000196979.1] WARNING, no entry stored in dbm for [ENSG00000241449.6] WARNING, no entry stored in dbm for [ENSG00000185296.8] WARNING, no entry stored in dbm for [ENSG00000227733.10] WARNING, no entry stored in dbm for [ENSG00000204622.11] WARNING, no entry stored in dbm for [ENSG00000235290.1] WARNING, no entry stored in dbm for [ENSG00000248785.1] WARNING, no entry stored in dbm for [ENSG00000233299.1] WARNING, no entry stored in dbm for [ENSG00000260827.1] WARNING, no entry stored in dbm for [ENSG00000270094.1] WARNING, no entry stored in dbm for [ENSG00000261618.2] WARNING, no entry stored in dbm for [ENSG00000279217.1] WARNING, no entry stored in dbm for [ENSG00000253438.4] WARNING, no entry stored in dbm for [ENSG00000234996.4] WARNING, no entry stored in dbm for [ENSG00000181984.11] WARNING, no entry stored in dbm for [ENSG00000243753.5] WARNING, no entry stored in dbm for [ENSG00000224837.1] WARNING, no entry stored in dbm for [ENSG00000231351.2] WARNING, no entry stored in dbm for [ENSG00000259259.1] WARNING, no entry stored in dbm for [ENSG00000280916.2] WARNING, no entry stored in dbm for [ENSG00000249835.2] WARNING, no entry stored in dbm for [ENSG00000229321.2] WARNING, no entry stored in dbm for [ENSG00000244383.2] WARNING, no entry stored in dbm for [ENSG00000237840.6] WARNING, no entry stored in dbm for [ENSG00000248578.1] WARNING, no entry stored in dbm for [ENSG00000232022.7] WARNING, no entry stored in dbm for [ENSG00000250183.2] WARNING, no entry stored in dbm for [ENSG00000230199.1] WARNING, no entry stored in dbm for [ENSG00000226688.7] WARNING, no entry stored in dbm for [ENSG00000226688.7] WARNING, no entry stored in dbm for [ENSG00000232656.9] WARNING, no entry stored in dbm for [ENSG00000224674.1] WARNING, no entry stored in dbm for [ENSG00000263883.1] WARNING, no entry stored in dbm for [ENSG00000229358.3] WARNING, no entry stored in dbm for [ENSG00000229358.3] WARNING, no entry stored in dbm for [ENSG00000272462.3] WARNING, no entry stored in dbm for [ENSG00000279080.1] WARNING, no entry stored in dbm for [ENSG00000177337.8] WARNING, no entry stored in dbm for [ENSG00000213904.9] WARNING, no entry stored in dbm for [ENSG00000250082.1] WARNING, no entry stored in dbm for [ENSG00000203364.2] WARNING, no entry stored in dbm for [ENSG00000229180.7] WARNING, no entry stored in dbm for [ENSG00000236709.1] WARNING, no entry stored in dbm for [ENSG00000255119.1] WARNING, no entry stored in dbm for [ENSG00000233937.7] WARNING, no entry stored in dbm for [ENSG00000187172.15] WARNING, no entry stored in dbm for [ENSG00000233937.7] WARNING, no entry stored in dbm for [ENSG00000248103.1] WARNING, no entry stored in dbm for [ENSG00000235154.1] WARNING, no entry stored in dbm for [ENSG00000248587.8] WARNING, no entry stored in dbm for [ENSG00000248150.1] WARNING, no entry stored in dbm for [ENSG00000247572.8] WARNING, no entry stored in dbm for [ENSG00000259755.1] WARNING, no entry stored in dbm for [ENSG00000286277.1] WARNING, no entry stored in dbm for [ENSG00000239899.3] WARNING, no entry stored in dbm for [ENSG00000240869.3] WARNING, no entry stored in dbm for [ENSG00000197214.5] WARNING, no entry stored in dbm for [ENSG00000228065.11] WARNING, no entry stored in dbm for [ENSG00000214243.3] WARNING, no entry stored in dbm for [ENSG00000203799.13] WARNING, no entry stored in dbm for [ENSG00000262202.4] WARNING, no entry stored in dbm for [ENSG00000276204.1] WARNING, no entry stored in dbm for [ENSG00000204177.10] WARNING, no entry stored in dbm for [ENSG00000238153.1] WARNING, no entry stored in dbm for [ENSG00000231929.2] WARNING, no entry stored in dbm for [ENSG00000158482.10] WARNING, no entry stored in dbm for [ENSG00000227883.1] WARNING, no entry stored in dbm for [ENSG00000224078.15] WARNING, no entry stored in dbm for [ENSG00000256591.5] WARNING, no entry stored in dbm for [ENSG00000254501.1] WARNING, no entry stored in dbm for [ENSG00000264964.2] WARNING, no entry stored in dbm for [ENSG00000280143.1] WARNING, no entry stored in dbm for [ENSG00000234715.2] WARNING, no entry stored in dbm for [ENSG00000230006.7] WARNING, no entry stored in dbm for [ENSG00000231317.1] WARNING, no entry stored in dbm for [ENSG00000237499.7] WARNING, no entry stored in dbm for [ENSG00000233902.1] WARNING, no entry stored in dbm for [ENSG00000225864.1] WARNING, no entry stored in dbm for [ENSG00000270780.1] WARNING, no entry stored in dbm for [ENSG00000220522.2] WARNING, no entry stored in dbm for [ENSG00000217379.2] WARNING, no entry stored in dbm for [ENSG00000240531.1] WARNING, no entry stored in dbm for [ENSG00000232499.2] WARNING, no entry stored in dbm for [ENSG00000254748.1] WARNING, no entry stored in dbm for [ENSG00000232499.2] WARNING, no entry stored in dbm for [ENSG00000275017.1] WARNING, no entry stored in dbm for [ENSG00000235749.3] WARNING, no entry stored in dbm for [ENSG00000217801.10] WARNING, no entry stored in dbm for [ENSG00000261839.1] WARNING, no entry stored in dbm for [ENSG00000234872.2] WARNING, no entry stored in dbm for [ENSG00000248503.2] WARNING, no entry stored in dbm for [ENSG00000246203.2] WARNING, no entry stored in dbm for [ENSG00000258634.3] WARNING, no entry stored in dbm for [ENSG00000273149.1] WARNING, no entry stored in dbm for [ENSG00000283283.2] WARNING, no entry stored in dbm for [ENSG00000287561.1] WARNING, no entry stored in dbm for [ENSG00000287569.1] WARNING, no entry stored in dbm for [ENSG00000227486.2] WARNING, no entry stored in dbm for [ENSG00000223804.5] WARNING, no entry stored in dbm for [ENSG00000229930.1] WARNING, no entry stored in dbm for [ENSG00000287707.1] WARNING, no entry stored in dbm for [ENSG00000250057.1] WARNING, no entry stored in dbm for [ENSG00000224479.6] WARNING, no entry stored in dbm for [ENSG00000282375.1] WARNING, no entry stored in dbm for [ENSG00000260236.1] WARNING, no entry stored in dbm for [ENSG00000260236.1] WARNING, no entry stored in dbm for [ENSG00000260236.1] WARNING, no entry stored in dbm for [ENSG00000270302.1] WARNING, no entry stored in dbm for [ENSG00000240207.7] WARNING, no entry stored in dbm for [ENSG00000257337.7] WARNING, no entry stored in dbm for [ENSG00000197320.5] WARNING, no entry stored in dbm for [ENSG00000255858.3] WARNING, no entry stored in dbm for [ENSG00000229212.8] WARNING, no entry stored in dbm for [ENSG00000287467.1] WARNING, no entry stored in dbm for [ENSG00000286090.1] WARNING, no entry stored in dbm for [ENSG00000260963.2] WARNING, no entry stored in dbm for [ENSG00000254485.5] WARNING, no entry stored in dbm for [ENSG00000258419.1] WARNING, no entry stored in dbm for [ENSG00000272140.2] WARNING, no entry stored in dbm for [ENSG00000251079.6] WARNING, no entry stored in dbm for [ENSG00000272800.3] WARNING, no entry stored in dbm for [ENSG00000269032.1] WARNING, no entry stored in dbm for [ENSG00000223508.5] WARNING, no entry stored in dbm for [ENSG00000247199.5] WARNING, no entry stored in dbm for [ENSG00000268746.1] WARNING, no entry stored in dbm for [ENSG00000111788.10] WARNING, no entry stored in dbm for [ENSG00000257612.2] WARNING, no entry stored in dbm for [ENSG00000223917.1] WARNING, no entry stored in dbm for [ENSG00000230202.1] WARNING, no entry stored in dbm for [ENSG00000259999.1] WARNING, no entry stored in dbm for [ENSG00000249655.1] WARNING, no entry stored in dbm for [ENSG00000258177.1] WARNING, no entry stored in dbm for [ENSG00000277283.1] WARNING, no entry stored in dbm for [ENSG00000235776.2] WARNING, no entry stored in dbm for [ENSG00000242248.2] * STAR-Fusion complete. See output: /tmp/nxf.s5icSS8VkF/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)