.command.log - Workdir - NFCORE_RNAFUSION:RNAFUSION:STARFUSION_WORKFLOW:STARFUSION (BVT_FFPE_TRNA_thy_01_A23WKFTLT4_3)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d8/fe3f6e07c248842535dc029ae0a3f7/.command.log
Size: 99.7 KB
Task: NFCORE_RNAFUSION:RNAFUSION:STARFUSION_WORKFLOW:STARFUSION (BVT_FFPE_TRNA_thy_01_A23WKFTLT4_3)
Attempt
Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d5/1d09bfae604ffc5345d0c1b9437628/BVT_FFPE_TRNA_thy_01_A23WKFTLT4_3_1.fastp.fastq.gz
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d8/fe3f6e07c248842535dc029ae0a3f7/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d5/1d09bfae604ffc5345d0c1b9437628/BVT_FFPE_TRNA_thy_01_A23WKFTLT4_3_2.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d8/fe3f6e07c248842535dc029ae0a3f7/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/57/760027ab9894358662ddefc9a02162/BVT_FFPE_TRNA_thy_01_A23WKFTLT4_3.Chimeric.out.junction
==> STAGING COMPLETE (6 inputs)

-ctat genome lib [/tmp/nxf.5rvr5BZFgt/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.5rvr5BZFgt/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.5rvr5BZFgt/./star-fusion.preliminary
-sample contains 273253266 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.5rvr5BZFgt/ctat_genome_lib_build_dir  -J /tmp/nxf.5rvr5BZFgt/BVT_FFPE_TRNA_thy_01_A23WKFTLT4_3.Chimeric.out.junction  -O /tmp/nxf.5rvr5BZFgt/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.5rvr5BZFgt/BVT_FFPE_TRNA_thy_01_A23WKFTLT4_3.Chimeric.out.junction
-building interval tree based on /tmp/nxf.5rvr5BZFgt/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

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[2870000], rate=44324.32/min -building interval tree based on /tmp/nxf.5rvr5BZFgt/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

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[2650000], rate=41787.12/min 
[2660000], rate=41476.09/min 
[2670000], rate=41150.78/min 
[2680000], rate=40801.8-building interval tree based on /tmp/nxf.5rvr5BZFgt/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

[10000], rate=75000.00/min 
[20000], rate=75000.00/min 
[30000], rate=78260.87/min 
[40000], rate=77419.35/min 
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[1780000], rate=62860.51/min 
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[2550000], rate=42241.86/min 
[2560000], rate=42325.71/min 
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[2580000], rate=42225.86/min 
[2590000], rate=42182.41/min 
[2600000], rate=42139.38/min 
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[2620000], rate=42088.35/min 
[2630000], rate=42068.78/min 
[2640000], rate=41893.68/min 
[2650000], rate=41699.45/min 
[2660000], rate=41714.58/min 
[2670000], rate=41729.62/min 
[2680000], rate=41744.55/min 
[2690000], rate=41770.19/min 
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[2720000], rate=41358.34/min 
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[2740000], rate=41213.34/min 
[2750000], rate=41260.32/min 
[2760000], rate=41265.89/min 
[2770000], rate=41158.99/min 
[2780000], rate=41023.12/min 
[2790000], rate=40899.10/min 
[2800000], rate=40875.91/min 
[2810000], rate=40793.61/min 
[2820000], rate=40859.70/min 
[2830000], rate=40945.26/min 
[2840000], rate=40991.10/min 
[2850000], rate=40938.47/min 
[2860000], rate=40984.00/min 
[2870000], rate=41058.66/min 3/min 
[2690000], rate=40491.72/min 
[2700000], rate=40308.53/min 
[2710000], rate=40307.39/min 
[2720000], rate=40336.13/min 
[2730000], rate=40354.77/min 
[2740000], rate=40353.46/min 
[2750000], rate=40381.79/min 
[2760000], rate=40400.10/min 
[2770000], rate=40428.12/min 
[2780000], rate=40455.98/min 
[2790000], rate=40483.68/min 
[2800000], rate=40530.76/min 
[2810000], rate=40577.62/min 
[2820000], rate=40614.50/min 
[2830000], rate=40660.92/min 
[2840000], rate=40677.97/min 
[2850000], rate=40540.54/min 
[2860000], rate=40424.03/min 
[2870000], rate=40243.05/min -building interval tree based on /tmp/nxf.5rvr5BZFgt/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

[10000], rate=120000.00/min 
[20000], rate=171428.57/min 
[30000], rate=163636.36/min 
[40000], rate=133333.33/min 
[50000], rate=157894.74/min 
[60000], rate=156521.74/min 
[70000], rate=182608.70/min 
[80000], rate=165517.24/min 
[90000], rate=163636.36/min 
[100000], rate=157894.74/min 
[110000], rate=146666.67/min 
[120000], rate=156521.74/min 
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[960000], rate=40706.71/min 
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[1130000], rate=40094.62/min 
[1140000], rate=40211.64/min 
[1150000], rate=40350.88/min 
[1160000], rate=40512.22/min 
[1170000], rate=40648.52/min 
[1180000], rate=40713.05/min 
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[1200000], rate=40201.01/min 
[1210000], rate=40000.00/min 
[1220000], rate=39804.24/min 
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[1330000], rate=38907.85/min 
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[1350000], rate=38352.27/min 
[1360000], rate=37935.84/min 
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[1390000], rate=37754.64/min 
[1400000], rate=37820.80/min 
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[1460000], rate=38505.49/min 
[1470000], rate=38599.56/min 
[1480000], rate=38709.68/min 
[1490000], rate=38802.08/min 
[1500000], rate=38910.51/min 
[1510000], rate=39034.90/min 
[1520000], rate=39158.44/min 
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[1540000], rate=39419.80/min 
[1550000], rate=39557.64/min 
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[1570000], rate=39814.03/min 
[1580000], rate=39949.43/min 
[1590000], rate=40084.03/min 
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[1680000], rate=41413.31/min 
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[1700000], rate=40348.10/min 
[1710000], rate=39598.61/min 
[1720000], rate=39359.27/min 
[1730000], rate=39243.86/min 
[1740000], rate=38998.88/min 
[1750000], rate=38475.63/min 
[1760000], rate=38191.68/min 
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[1980000], rate=36860.07/min 
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[2000000], rate=36934.44/min 
[2010000], rate=36982.52/min 
[2020000], rate=37018.94/min 
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[2110000], rate=37345.13/min 
[2120000], rate=37444.80/min 
[2130000], rate=37533.04/min 
[2140000], rate=37631.89/min 
[2150000], rate=37730.33/min 
[2160000], rate=37839.42/min 
[2170000], rate=37948.12/min 
[2180000], rate=38045.38/min 
[2190000], rate=38153.31/min 
[2200000], rate=38271.96/min 
[2210000], rate=38169.26/min 
[2220000], rate=37712.34/min 
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[2240000], rate=36661.21/min 
[2250000], rate=36270.82/min 
[2260000], rate=35816.16/min 
[2270000], rate=35450.29/min 
[2280000], rate=35212.36/min 
[2290000], rate=35212.71/min 
[2300000], rate=35150.28/min 
[2310000], rate=34964.68/min 
[2320000], rate=34817.41/min 
[2330000], rate=34828.10/min 
[2340000], rate=34830.07/min 
[2350000], rate=34814.81/min 
[2360000], rate=34808.26/min 
[2370000], rate=34818.81/min 
[2380000], rate=34820.78/min 
[2390000], rate=34839.65/min 
[2400000], rate=34849.95/min 
[2410000], rate=34860.17/min 
[2420000], rate=34861.94/min 
[2430000], rate=34813.75/min 
[2440000], rate=34650.89/min 
[2450000], rate=34450.43/min 
[2460000], rate=34293.68/min 
[2470000], rate=34155.34/min 
[2480000], rate=34183.32/min 
[2490000], rate=34218.96/min 
[2500000], rate=34270.05/min 
[2510000], rate=34336.53/min 
[2520000], rate=34394.90/min 
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[2550000], rate=34560.65/min 
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[2680000], rate=35567.35/min 
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[2700000], rate=35745.81/min 
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[2830000], rate=36689.71/min 
[2840000], rate=36771.69/min 
[2850000], rate=36853.45/min 
[2860000], rate=36935.00/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.5rvr5BZFgt/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.5rvr5BZFgt/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.5rvr5BZFgt/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.5rvr5BZFgt/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.5rvr5BZFgt/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 0.00 reads per min processed...  
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 4430769.23 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.5rvr5BZFgt/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.5rvr5BZFgt/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.5rvr5BZFgt/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.5rvr5BZFgt/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.5rvr5BZFgt/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.5rvr5BZFgt/BVT_FFPE_TRNA_thy_01_A23WKFTLT4_3.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.5rvr5BZFgt/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.5rvr5BZFgt/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.5rvr5BZFgt/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -390079.183397
EM: Round [1] log likelihood: -389754.308427
EM: Round [2] log likelihood: -389659.357787
EM: Round [3] log likelihood: -389615.965327
EM: Round [4] log likelihood: -389593.200644
EM: Round [5] log likelihood: -389580.421801
EM: Round [6] log likelihood: -389572.881428
EM: Round [7] log likelihood: -389568.220398
EM: Round [8] log likelihood: -389565.203608
EM: Round [9] log likelihood: -389563.162132
EM: Round [10] log likelihood: -389561.722330
EM: Round [11] log likelihood: -389560.668664
EM: Round [12] log likelihood: -389559.872508
EM: Round [13] log likelihood: -389559.254391
EM: Round [14] log likelihood: -389558.763482
EM: Round [15] log likelihood: -389558.366168
EM: Round [16] log likelihood: -389558.039504
EM: Round [17] log likelihood: -389557.767365
EM: Round [18] log likelihood: -389557.538116
EM: Round [19] log likelihood: -389557.343156
EM: Round [20] log likelihood: -389557.175995
EM: Round [21] log likelihood: -389557.031639
EM: Round [22] log likelihood: -389556.906189
EM: Round [23] log likelihood: -389556.796549
EM: Round [24] log likelihood: -389556.700238
EM: Round [25] log likelihood: -389556.615239
EM: Round [26] log likelihood: -389556.539901
EM: Round [27] log likelihood: -389556.472859
EM: Round [28] log likelihood: -389556.412977
EM: Round [29] log likelihood: -389556.359304
EM: Round [30] log likelihood: -389556.311038
EM: Round [31] log likelihood: -389556.267499
EM: Round [32] log likelihood: -389556.228107
EM: Round [33] log likelihood: -389556.192369
EM: Round [34] log likelihood: -389556.159860
EM: Round [35] log likelihood: -389556.130212
EM: Round [36] log likelihood: -389556.103109
EM: Round [37] log likelihood: -389556.078276
EM: Round [38] log likelihood: -389556.055473
EM: Round [39] log likelihood: -389556.034491
EM: Round [40] log likelihood: -389556.015146
EM: Round [41] log likelihood: -389555.997278
EM: Round [42] log likelihood: -389555.980743
EM: Round [43] log likelihood: -389555.965416
EM: Round [44] log likelihood: -389555.951187
EM: Round [45] log likelihood: -389555.937955
EM: Round [46] log likelihood: -389555.925634
EM: Round [47] log likelihood: -389555.914143
EM: Round [48] log likelihood: -389555.903414
EM: Round [49] log likelihood: -389555.893383
EM: Round [50] log likelihood: -389555.883993
EM: Round [51] log likelihood: -389555.875192
EM: Round [52] log likelihood: -389555.866936
EM: Round [53] log likelihood: -389555.859182
EM: Round [54] log likelihood: -389555.851892
EM: Round [55] log likelihood: -389555.845031
EM: Round [56] log likelihood: -389555.838570
EM: Round [57] log likelihood: -389555.832479
EM: Round [58] log likelihood: -389555.826731
EM: Round [59] log likelihood: -389555.821304
EM: Round [60] log likelihood: -389555.816176
EM: Round [61] log likelihood: -389555.811326
EM: Round [62] log likelihood: -389555.806736
EM: Round [63] log likelihood: -389555.802389
EM: Round [64] log likelihood: -389555.798271
EM: Round [65] log likelihood: -389555.794365
EM: Round [66] log likelihood: -389555.790659
EM: Round [67] log likelihood: -389555.787141
EM: Round [68] log likelihood: -389555.783799
EM: Round [69] log likelihood: -389555.780624
EM: Round [70] log likelihood: -389555.777604
EM: Round [71] log likelihood: -389555.774731
EM: Round [72] log likelihood: -389555.771996
EM: Round [73] log likelihood: -389555.769392
EM: Round [74] log likelihood: -389555.766911
EM: Round [75] log likelihood: -389555.764546
EM: Round [76] log likelihood: -389555.762291
EM: Round [77] log likelihood: -389555.760141
EM: Round [78] log likelihood: -389555.758088
EM: Round [79] log likelihood: -389555.756129
EM: Round [80] log likelihood: -389555.754257
EM: Round [81] log likelihood: -389555.752470
EM: Round [82] log likelihood: -389555.750761
EM: Round [83] log likelihood: -389555.749128
EM: Round [84] log likelihood: -389555.747566
EM: Round [85] log likelihood: -389555.746072
EM: Round [86] log likelihood: -389555.744642
EM: Round [87] log likelihood: -389555.743273
EM: Round [88] log likelihood: -389555.741963
EM: Round [89] log likelihood: -389555.740708
EM: Round [90] log likelihood: -389555.739505
EM: Round [91] log likelihood: -389555.738353
EM: Round [92] log likelihood: -389555.737248
EM: Round [93] log likelihood: -389555.736189
EM: Round [94] log likelihood: -389555.735174
EM: Round [95] log likelihood: -389555.734200
EM: Round [96] log likelihood: -389555.733265
EM: Round [97] log likelihood: -389555.732368
EM: Round [98] log likelihood: -389555.731507
EM: Round [99] log likelihood: -389555.730680
EM: Round [100] log likelihood: -389555.729886
EM: Round [101] log likelihood: -389555.729124
EM: Round [102] log likelihood: -389555.728391
EM: Round [103] log likelihood: -389555.727687
EM: Round [104] log likelihood: -389555.727011
EM: Round [105] log likelihood: -389555.726360
EM: Round [106] log likelihood: -389555.725735
EM: Round [107] log likelihood: -389555.725134
EM: Round [108] log likelihood: -389555.724555
EM: Round [109] log likelihood: -389555.723999
EM: Round [110] log likelihood: -389555.723464
EM: Round [111] log likelihood: -389555.722949
EM: Round [112] log likelihood: -389555.722453
EM: Round [113] log likelihood: -389555.721976
EM: Round [114] log likelihood: -389555.721516
EM: Round [115] log likelihood: -389555.721074
EM: Round [116] log likelihood: -389555.720648
EM: Round [117] log likelihood: -389555.720237
EM: Round [118] log likelihood: -389555.719842
EM: Round [119] log likelihood: -389555.719461
EM: Round [120] log likelihood: -389555.719094
EM: Round [121] log likelihood: -389555.718741
EM: Round [122] log likelihood: -389555.718400
EM: Round [123] log likelihood: -389555.718071
EM: Round [124] log likelihood: -389555.717754
EM: Round [125] log likelihood: -389555.717449
EM: Round [126] log likelihood: -389555.717154
EM: Round [127] log likelihood: -389555.716870
EM: Round [128] log likelihood: -389555.716596
EM: Round [129] log likelihood: -389555.716332
EM: Round [130] log likelihood: -389555.716077
EM: Round [131] log likelihood: -389555.715831
EM: Round [132] log likelihood: -389555.715593
EM: Round [133] log likelihood: -389555.715364
EM: Round [134] log likelihood: -389555.715142
EM: Round [135] log likelihood: -389555.714929
EM: Round [136] log likelihood: -389555.714723
EM: Round [137] log likelihood: -389555.714523
EM: Round [138] log likelihood: -389555.714331
EM: Round [139] log likelihood: -389555.714145
EM: Round [140] log likelihood: -389555.713966
EM: Round [141] log likelihood: -389555.713793
EM: Round [142] log likelihood: -389555.713625
EM: Round [143] log likelihood: -389555.713464
EM: Round [144] log likelihood: -389555.713307
EM: Round [145] log likelihood: -389555.713156
EM: Round [146] log likelihood: -389555.713011
EM: Round [147] log likelihood: -389555.712869
EM: Round [148] log likelihood: -389555.712733
EM: Round [149] log likelihood: -389555.712601
EM: Round [150] log likelihood: -389555.712474
EM: Round [151] log likelihood: -389555.712351
EM: Round [152] log likelihood: -389555.712232
EM: Round [153] log likelihood: -389555.712117
EM: Round [154] log likelihood: -389555.712005
EM: Round [155] log likelihood: -389555.711897
EM: Round [156] log likelihood: -389555.711793
EM: Round [157] log likelihood: -389555.711692
EM: Round [158] log likelihood: -389555.711595
EM: Stopping iterations at round 158 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -388239.748629
EM: Round [1] log likelihood: -388035.038905
EM: Round [2] log likelihood: -387973.066890
EM: Round [3] log likelihood: -387944.179325
EM: Round [4] log likelihood: -387928.912179
EM: Round [5] log likelihood: -387920.365490
EM: Round [6] log likelihood: -387915.363728
EM: Round [7] log likelihood: -387912.303013
EM: Round [8] log likelihood: -387910.341112
EM: Round [9] log likelihood: -387909.024261
EM: Round [10] log likelihood: -387908.101375
EM: Round [11] log likelihood: -387907.429174
EM: Round [12] log likelihood: -387906.923045
EM: Round [13] log likelihood: -387906.531177
EM: Round [14] log likelihood: -387906.220670
EM: Round [15] log likelihood: -387905.969879
EM: Round [16] log likelihood: -387905.764082
EM: Round [17] log likelihood: -387905.592954
EM: Round [18] log likelihood: -387905.449060
EM: Round [19] log likelihood: -387905.326908
EM: Round [20] log likelihood: -387905.222356
EM: Round [21] log likelihood: -387905.132226
EM: Round [22] log likelihood: -387905.054031
EM: Round [23] log likelihood: -387904.985805
EM: Round [24] log likelihood: -387904.925971
EM: Round [25] log likelihood: -387904.873249
EM: Round [26] log likelihood: -387904.826592
EM: Round [27] log likelihood: -387904.785136
EM: Round [28] log likelihood: -387904.748164
EM: Round [29] log likelihood: -387904.715074
EM: Round [30] log likelihood: -387904.685360
EM: Round [31] log likelihood: -387904.658593
EM: Round [32] log likelihood: -387904.634410
EM: Round [33] log likelihood: -387904.612498
EM: Round [34] log likelihood: -387904.592592
EM: Round [35] log likelihood: -387904.574460
EM: Round [36] log likelihood: -387904.557904
EM: Round [37] log likelihood: -387904.542752
EM: Round [38] log likelihood: -387904.528854
EM: Round [39] log likelihood: -387904.516079
EM: Round [40] log likelihood: -387904.504312
EM: Round [41] log likelihood: -387904.493453
EM: Round [42] log likelihood: -387904.483414
EM: Round [43] log likelihood: -387904.474116
EM: Round [44] log likelihood: -387904.465489
EM: Round [45] log likelihood: -387904.457473
EM: Round [46] log likelihood: -387904.450014
EM: Round [47] log likelihood: -387904.443061
EM: Round [48] log likelihood: -387904.436573
EM: Round [49] log likelihood: -387904.430509
EM: Round [50] log likelihood: -387904.424836
EM: Round [51] log likelihood: -387904.419520
EM: Round [52] log likelihood: -387904.414535
EM: Round [53] log likelihood: -387904.409855
EM: Round [54] log likelihood: -387904.405455
EM: Round [55] log likelihood: -387904.401316
EM: Round [56] log likelihood: -387904.397418
EM: Round [57] log likelihood: -387904.393744
EM: Round [58] log likelihood: -387904.390277
EM: Round [59] log likelihood: -387904.387004
EM: Round [60] log likelihood: -387904.383911
EM: Round [61] log likelihood: -387904.380986
EM: Round [62] log likelihood: -387904.378218
EM: Round [63] log likelihood: -387904.375597
EM: Round [64] log likelihood: -387904.373113
EM: Round [65] log likelihood: -387904.370757
EM: Round [66] log likelihood: -387904.368522
EM: Round [67] log likelihood: -387904.366400
EM: Round [68] log likelihood: -387904.364384
EM: Round [69] log likelihood: -387904.362468
EM: Round [70] log likelihood: -387904.360646
EM: Round [71] log likelihood: -387904.358912
EM: Round [72] log likelihood: -387904.357262
EM: Round [73] log likelihood: -387904.355691
EM: Round [74] log likelihood: -387904.354193
EM: Round [75] log likelihood: -387904.352766
EM: Round [76] log likelihood: -387904.351406
EM: Round [77] log likelihood: -387904.350108
EM: Round [78] log likelihood: -387904.348869
EM: Round [79] log likelihood: -387904.347687
EM: Round [80] log likelihood: -387904.346557
EM: Round [81] log likelihood: -387904.345479
EM: Round [82] log likelihood: -387904.344448
EM: Round [83] log likelihood: -387904.343463
EM: Round [84] log likelihood: -387904.342521
EM: Round [85] log likelihood: -387904.341619
EM: Round [86] log likelihood: -387904.340757
EM: Round [87] log likelihood: -387904.339932
EM: Round [88] log likelihood: -387904.339143
EM: Round [89] log likelihood: -387904.338387
EM: Round [90] log likelihood: -387904.337662
EM: Round [91] log likelihood: -387904.336969
EM: Round [92] log likelihood: -387904.336304
EM: Round [93] log likelihood: -387904.335667
EM: Round [94] log likelihood: -387904.335056
EM: Round [95] log likelihood: -387904.334471
EM: Round [96] log likelihood: -387904.333910
EM: Round [97] log likelihood: -387904.333371
EM: Round [98] log likelihood: -387904.332855
EM: Round [99] log likelihood: -387904.332359
EM: Round [100] log likelihood: -387904.331883
EM: Round [101] log likelihood: -387904.331427
EM: Round [102] log likelihood: -387904.330989
EM: Round [103] log likelihood: -387904.330568
EM: Round [104] log likelihood: -387904.330164
EM: Round [105] log likelihood: -387904.329776
EM: Round [106] log likelihood: -387904.329403
EM: Round [107] log likelihood: -387904.329045
EM: Round [108] log likelihood: -387904.328700
EM: Round [109] log likelihood: -387904.328370
EM: Round [110] log likelihood: -387904.328052
EM: Round [111] log likelihood: -387904.327746
EM: Round [112] log likelihood: -387904.327453
EM: Round [113] log likelihood: -387904.327170
EM: Round [114] log likelihood: -387904.326899
EM: Round [115] log likelihood: -387904.326638
EM: Round [116] log likelihood: -387904.326386
EM: Round [117] log likelihood: -387904.326145
EM: Round [118] log likelihood: -387904.325912
EM: Round [119] log likelihood: -387904.325689
EM: Round [120] log likelihood: -387904.325473
EM: Round [121] log likelihood: -387904.325266
EM: Round [122] log likelihood: -387904.325067
EM: Round [123] log likelihood: -387904.324875
EM: Round [124] log likelihood: -387904.324691
EM: Round [125] log likelihood: -387904.324513
EM: Round [126] log likelihood: -387904.324342
EM: Round [127] log likelihood: -387904.324177
EM: Round [128] log likelihood: -387904.324018
EM: Round [129] log likelihood: -387904.323866
EM: Round [130] log likelihood: -387904.323719
EM: Round [131] log likelihood: -387904.323577
EM: Round [132] log likelihood: -387904.323440
EM: Round [133] log likelihood: -387904.323309
EM: Round [134] log likelihood: -387904.323182
EM: Round [135] log likelihood: -387904.323060
EM: Round [136] log likelihood: -387904.322943
EM: Round [137] log likelihood: -387904.322829
EM: Round [138] log likelihood: -387904.322720
EM: Round [139] log likelihood: -387904.322615
EM: Round [140] log likelihood: -387904.322513
EM: Round [141] log likelihood: -387904.322416
EM: Stopping iterations at round 141 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.5rvr5BZFgt/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.5rvr5BZFgt/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.5rvr5BZFgt/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.5rvr5BZFgt/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.5rvr5BZFgt/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.5rvr5BZFgt/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.5rvr5BZFgt/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.5rvr5BZFgt/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.5rvr5BZFgt/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.5rvr5BZFgt/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.5rvr5BZFgt/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.5rvr5BZFgt/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.5rvr5BZFgt/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.5rvr5BZFgt/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 273253266 > /tmp/nxf.5rvr5BZFgt/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.5rvr5BZFgt/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.5rvr5BZFgt/ctat_genome_lib_build_dir > /tmp/nxf.5rvr5BZFgt/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.5rvr5BZFgt/ctat_genome_lib_build_dir --annotate /tmp/nxf.5rvr5BZFgt/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.5rvr5BZFgt/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.5rvr5BZFgt/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.5rvr5BZFgt/ctat_genome_lib_build_dir
-done, see /tmp/nxf.5rvr5BZFgt/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.5rvr5BZFgt/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.5rvr5BZFgt/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 2173, filtered: 14682)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.5rvr5BZFgt/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.5rvr5BZFgt/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.5rvr5BZFgt/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [ENSG00000203635.2]
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WARNING, no entry stored in dbm for [ENSG00000266952.2]
WARNING, no entry stored in dbm for [ENSG00000078319.10]
WARNING, no entry stored in dbm for [ENSG00000078319.10]
WARNING, no entry stored in dbm for [ENSG00000187953.10]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000236155.6]
WARNING, no entry stored in dbm for [ENSG00000254872.3]
WARNING, no entry stored in dbm for [ENSG00000256546.2]
WARNING, no entry stored in dbm for [ENSG00000178412.4]
WARNING, no entry stored in dbm for [ENSG00000234636.2]
WARNING, no entry stored in dbm for [ENSG00000228839.5]
WARNING, no entry stored in dbm for [ENSG00000233090.1]
WARNING, no entry stored in dbm for [ENSG00000274354.1]
WARNING, no entry stored in dbm for [ENSG00000255185.6]
WARNING, no entry stored in dbm for [ENSG00000227893.1]
WARNING, no entry stored in dbm for [ENSG00000275131.3]
WARNING, no entry stored in dbm for [ENSG00000240405.7]
WARNING, no entry stored in dbm for [ENSG00000286027.1]
WARNING, no entry stored in dbm for [ENSG00000286122.1]
WARNING, no entry stored in dbm for [ENSG00000228288.7]
WARNING, no entry stored in dbm for [ENSG00000287900.1]
WARNING, no entry stored in dbm for [ENSG00000226949.1]
WARNING, no entry stored in dbm for [ENSG00000255485.1]
WARNING, no entry stored in dbm for [ENSG00000254408.1]
WARNING, no entry stored in dbm for [ENSG00000257169.1]
WARNING, no entry stored in dbm for [ENSG00000258853.1]
WARNING, no entry stored in dbm for [ENSG00000235636.1]
WARNING, no entry stored in dbm for [ENSG00000203620.2]
WARNING, no entry stored in dbm for [ENSG00000235636.1]
WARNING, no entry stored in dbm for [ENSG00000284702.1]
WARNING, no entry stored in dbm for [ENSG00000260075.1]
WARNING, no entry stored in dbm for [ENSG00000278932.4]
WARNING, no entry stored in dbm for [ENSG00000259275.4]
WARNING, no entry stored in dbm for [ENSG00000281183.1]
WARNING, no entry stored in dbm for [ENSG00000273090.1]
WARNING, no entry stored in dbm for [ENSG00000257167.2]
WARNING, no entry stored in dbm for [ENSG00000230487.8]
WARNING, no entry stored in dbm for [ENSG00000273297.2]
WARNING, no entry stored in dbm for [ENSG00000260139.6]
WARNING, no entry stored in dbm for [ENSG00000246982.7]
WARNING, no entry stored in dbm for [ENSG00000135502.19]
WARNING, no entry stored in dbm for [ENSG00000280254.1]
WARNING, no entry stored in dbm for [ENSG00000233325.3]
WARNING, no entry stored in dbm for [ENSG00000227195.11]
WARNING, no entry stored in dbm for [ENSG00000249229.2]
WARNING, no entry stored in dbm for [ENSG00000228224.3]
WARNING, no entry stored in dbm for [ENSG00000227913.1]
WARNING, no entry stored in dbm for [ENSG00000251372.6]
WARNING, no entry stored in dbm for [ENSG00000288633.1]
WARNING, no entry stored in dbm for [ENSG00000236051.7]
WARNING, no entry stored in dbm for [ENSG00000228323.2]
WARNING, no entry stored in dbm for [ENSG00000283426.1]
WARNING, no entry stored in dbm for [ENSG00000283426.1]
WARNING, no entry stored in dbm for [ENSG00000185485.14]
WARNING, no entry stored in dbm for [ENSG00000231490.1]
WARNING, no entry stored in dbm for [ENSG00000214955.5]
WARNING, no entry stored in dbm for [ENSG00000250299.6]
WARNING, no entry stored in dbm for [ENSG00000251141.6]
WARNING, no entry stored in dbm for [ENSG00000229759.1]
WARNING, no entry stored in dbm for [ENSG00000287721.1]
WARNING, no entry stored in dbm for [ENSG00000218283.2]
WARNING, no entry stored in dbm for [ENSG00000254066.2]
WARNING, no entry stored in dbm for [ENSG00000286305.1]
WARNING, no entry stored in dbm for [ENSG00000259256.2]
WARNING, no entry stored in dbm for [ENSG00000230590.11]
WARNING, no entry stored in dbm for [ENSG00000215386.13]
WARNING, no entry stored in dbm for [ENSG00000283944.1]
WARNING, no entry stored in dbm for [ENSG00000225746.13]
WARNING, no entry stored in dbm for [ENSG00000171889.5]
WARNING, no entry stored in dbm for [ENSG00000283498.1]
WARNING, no entry stored in dbm for [ENSG00000269907.1]
WARNING, no entry stored in dbm for [ENSG00000230970.4]
WARNING, no entry stored in dbm for [ENSG00000283128.2]
WARNING, no entry stored in dbm for [ENSG00000251508.1]
WARNING, no entry stored in dbm for [ENSG00000242598.1]
WARNING, no entry stored in dbm for [ENSG00000226530.2]
WARNING, no entry stored in dbm for [ENSG00000214930.2]
WARNING, no entry stored in dbm for [ENSG00000231689.2]
WARNING, no entry stored in dbm for [ENSG00000278943.1]
WARNING, no entry stored in dbm for [ENSG00000267489.5]
WARNING, no entry stored in dbm for [ENSG00000276853.1]
WARNING, no entry stored in dbm for [ENSG00000287119.1]
WARNING, no entry stored in dbm for [ENSG00000277561.5]
WARNING, no entry stored in dbm for [ENSG00000269945.1]
WARNING, no entry stored in dbm for [ENSG00000235954.7]
WARNING, no entry stored in dbm for [ENSG00000238045.9]
WARNING, no entry stored in dbm for [ENSG00000228412.9]
WARNING, no entry stored in dbm for [ENSG00000254968.7]
WARNING, no entry stored in dbm for [ENSG00000285737.1]
WARNING, no entry stored in dbm for [ENSG00000203688.6]
WARNING, no entry stored in dbm for [ENSG00000223914.4]
WARNING, no entry stored in dbm for [ENSG00000281903.2]
WARNING, no entry stored in dbm for [ENSG00000261175.6]
WARNING, no entry stored in dbm for [ENSG00000249797.2]
WARNING, no entry stored in dbm for [ENSG00000242781.2]
WARNING, no entry stored in dbm for [ENSG00000224961.3]
WARNING, no entry stored in dbm for [ENSG00000279579.3]
WARNING, no entry stored in dbm for [ENSG00000224968.2]
WARNING, no entry stored in dbm for [ENSG00000261008.7]
WARNING, no entry stored in dbm for [ENSG00000261008.7]
WARNING, no entry stored in dbm for [ENSG00000225434.3]
WARNING, no entry stored in dbm for [ENSG00000233806.7]
WARNING, no entry stored in dbm for [ENSG00000223715.3]
WARNING, no entry stored in dbm for [ENSG00000237667.7]
WARNING, no entry stored in dbm for [ENSG00000242641.6]
WARNING, no entry stored in dbm for [ENSG00000235703.6]
WARNING, no entry stored in dbm for [ENSG00000242759.8]
WARNING, no entry stored in dbm for [ENSG00000277147.6]
WARNING, no entry stored in dbm for [ENSG00000280809.4]
WARNING, no entry stored in dbm for [ENSG00000237854.3]
WARNING, no entry stored in dbm for [ENSG00000226067.7]
WARNING, no entry stored in dbm for [ENSG00000233237.8]
WARNING, no entry stored in dbm for [ENSG00000233237.8]
WARNING, no entry stored in dbm for [ENSG00000231535.7]
WARNING, no entry stored in dbm for [ENSG00000165121.11]
WARNING, no entry stored in dbm for [ENSG00000177369.9]
WARNING, no entry stored in dbm for [ENSG00000250426.2]
WARNING, no entry stored in dbm for [ENSG00000248568.1]
WARNING, no entry stored in dbm for [ENSG00000187686.4]
WARNING, no entry stored in dbm for [ENSG00000213601.3]
WARNING, no entry stored in dbm for [ENSG00000253872.1]
WARNING, no entry stored in dbm for [ENSG00000232973.13]
WARNING, no entry stored in dbm for [ENSG00000267325.2]
WARNING, no entry stored in dbm for [ENSG00000264116.6]
WARNING, no entry stored in dbm for [ENSG00000204650.14]
WARNING, no entry stored in dbm for [ENSG00000251347.2]
WARNING, no entry stored in dbm for [ENSG00000275437.1]
WARNING, no entry stored in dbm for [ENSG00000152117.17]
WARNING, no entry stored in dbm for [ENSG00000270760.1]
WARNING, no entry stored in dbm for [ENSG00000236778.8]
WARNING, no entry stored in dbm for [ENSG00000253560.1]
WARNING, no entry stored in dbm for [ENSG00000262223.8]
WARNING, no entry stored in dbm for [ENSG00000279716.1]
WARNING, no entry stored in dbm for [ENSG00000216425.4]
WARNING, no entry stored in dbm for [ENSG00000276975.3]
WARNING, no entry stored in dbm for [ENSG00000244627.5]
WARNING, no entry stored in dbm for [ENSG00000263571.3]
WARNING, no entry stored in dbm for [ENSG00000234639.1]
WARNING, no entry stored in dbm for [ENSG00000280011.1]
WARNING, no entry stored in dbm for [ENSG00000285219.2]
WARNING, no entry stored in dbm for [ENSG00000285672.1]
WARNING, no entry stored in dbm for [ENSG00000227688.2]
WARNING, no entry stored in dbm for [ENSG00000262732.1]
WARNING, no entry stored in dbm for [ENSG00000206337.12]
WARNING, no entry stored in dbm for [ENSG00000274717.1]
WARNING, no entry stored in dbm for [ENSG00000223383.1]
WARNING, no entry stored in dbm for [ENSG00000254838.5]
WARNING, no entry stored in dbm for [ENSG00000123201.14]
WARNING, no entry stored in dbm for [ENSG00000233910.1]
WARNING, no entry stored in dbm for [ENSG00000214765.8]
WARNING, no entry stored in dbm for [ENSG00000228485.1]
WARNING, no entry stored in dbm for [ENSG00000189136.9]
WARNING, no entry stored in dbm for [ENSG00000260693.1]
WARNING, no entry stored in dbm for [ENSG00000244952.2]
WARNING, no entry stored in dbm for [ENSG00000250903.9]
WARNING, no entry stored in dbm for [ENSG00000250903.9]
WARNING, no entry stored in dbm for [ENSG00000233695.2]
WARNING, no entry stored in dbm for [ENSG00000232411.1]
WARNING, no entry stored in dbm for [ENSG00000259905.7]
WARNING, no entry stored in dbm for [ENSG00000259905.7]
WARNING, no entry stored in dbm for [ENSG00000275374.1]
WARNING, no entry stored in dbm for [ENSG00000229922.5]
WARNING, no entry stored in dbm for [ENSG00000233933.2]
WARNING, no entry stored in dbm for [ENSG00000230590.11]
WARNING, no entry stored in dbm for [ENSG00000231646.6]
WARNING, no entry stored in dbm for [ENSG00000287129.1]
WARNING, no entry stored in dbm for [ENSG00000231646.6]
WARNING, no entry stored in dbm for [ENSG00000287129.1]
WARNING, no entry stored in dbm for [ENSG00000237975.7]
WARNING, no entry stored in dbm for [ENSG00000259887.1]
WARNING, no entry stored in dbm for [ENSG00000225733.6]
WARNING, no entry stored in dbm for [ENSG00000196656.7]
WARNING, no entry stored in dbm for [ENSG00000254141.1]
WARNING, no entry stored in dbm for [ENSG00000250227.1]
WARNING, no entry stored in dbm for [ENSG00000255052.5]
WARNING, no entry stored in dbm for [ENSG00000254016.3]
WARNING, no entry stored in dbm for [ENSG00000224888.4]
WARNING, no entry stored in dbm for [ENSG00000231528.3]
WARNING, no entry stored in dbm for [ENSG00000247828.8]
WARNING, no entry stored in dbm for [ENSG00000265533.1]
WARNING, no entry stored in dbm for [ENSG00000168405.17]
WARNING, no entry stored in dbm for [ENSG00000235438.7]
WARNING, no entry stored in dbm for [ENSG00000259465.2]
WARNING, no entry stored in dbm for [ENSG00000227304.3]
WARNING, no entry stored in dbm for [ENSG00000204623.9]
WARNING, no entry stored in dbm for [ENSG00000234152.1]
WARNING, no entry stored in dbm for [ENSG00000251508.1]
WARNING, no entry stored in dbm for [ENSG00000258084.6]
WARNING, no entry stored in dbm for [ENSG00000266979.1]
WARNING, no entry stored in dbm for [ENSG00000184991.3]
WARNING, no entry stored in dbm for [ENSG00000237294.1]
WARNING, no entry stored in dbm for [ENSG00000280739.3]
WARNING, no entry stored in dbm for [ENSG00000286045.1]
WARNING, no entry stored in dbm for [ENSG00000287022.1]
WARNING, no entry stored in dbm for [ENSG00000225872.4]
WARNING, no entry stored in dbm for [ENSG00000225031.1]
WARNING, no entry stored in dbm for [ENSG00000287119.1]
WARNING, no entry stored in dbm for [ENSG00000176584.18]
WARNING, no entry stored in dbm for [ENSG00000228002.2]
WARNING, no entry stored in dbm for [ENSG00000234637.1]
WARNING, no entry stored in dbm for [ENSG00000232811.1]
WARNING, no entry stored in dbm for [ENSG00000231890.8]
WARNING, no entry stored in dbm for [ENSG00000245384.2]
WARNING, no entry stored in dbm for [ENSG00000279303.1]
WARNING, no entry stored in dbm for [ENSG00000277053.4]
WARNING, no entry stored in dbm for [ENSG00000231704.6]
WARNING, no entry stored in dbm for [ENSG00000255426.1]
WARNING, no entry stored in dbm for [ENSG00000275803.1]
WARNING, no entry stored in dbm for [ENSG00000263968.2]
WARNING, no entry stored in dbm for [ENSG00000266258.1]
WARNING, no entry stored in dbm for [ENSG00000236088.10]
WARNING, no entry stored in dbm for [ENSG00000261801.6]
WARNING, no entry stored in dbm for [ENSG00000236360.2]
WARNING, no entry stored in dbm for [ENSG00000256799.1]
WARNING, no entry stored in dbm for [ENSG00000283538.3]
WARNING, no entry stored in dbm for [ENSG00000246985.8]
WARNING, no entry stored in dbm for [ENSG00000226312.7]
WARNING, no entry stored in dbm for [ENSG00000230795.3]
WARNING, no entry stored in dbm for [ENSG00000260765.2]
WARNING, no entry stored in dbm for [ENSG00000249785.3]
WARNING, no entry stored in dbm for [ENSG00000240498.9]
WARNING, no entry stored in dbm for [ENSG00000224861.1]
WARNING, no entry stored in dbm for [ENSG00000273253.2]
WARNING, no entry stored in dbm for [ENSG00000244712.1]
WARNING, no entry stored in dbm for [ENSG00000286277.1]
WARNING, no entry stored in dbm for [ENSG00000255920.3]
WARNING, no entry stored in dbm for [ENSG00000251510.1]
WARNING, no entry stored in dbm for [ENSG00000223745.8]
WARNING, no entry stored in dbm for [ENSG00000223745.8]
WARNING, no entry stored in dbm for [ENSG00000277654.6]
WARNING, no entry stored in dbm for [ENSG00000239521.9]
WARNING, no entry stored in dbm for [ENSG00000201641.1]
WARNING, no entry stored in dbm for [ENSG00000256847.1]
WARNING, no entry stored in dbm for [ENSG00000196366.3]
WARNING, no entry stored in dbm for [ENSG00000204352.4]
WARNING, no entry stored in dbm for [ENSG00000188511.12]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000205930.10]
WARNING, no entry stored in dbm for [ENSG00000257242.8]
WARNING, no entry stored in dbm for [ENSG00000213970.4]
WARNING, no entry stored in dbm for [ENSG00000242338.6]
WARNING, no entry stored in dbm for [ENSG00000243289.1]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000241684.6]
WARNING, no entry stored in dbm for [ENSG00000248966.1]
WARNING, no entry stored in dbm for [ENSG00000227467.3]
WARNING, no entry stored in dbm for [ENSG00000279022.1]
WARNING, no entry stored in dbm for [ENSG00000233967.7]
WARNING, no entry stored in dbm for [ENSG00000272693.4]
WARNING, no entry stored in dbm for [ENSG00000247081.8]
WARNING, no entry stored in dbm for [ENSG00000255545.8]
WARNING, no entry stored in dbm for [ENSG00000227883.1]
WARNING, no entry stored in dbm for [ENSG00000227499.1]
WARNING, no entry stored in dbm for [ENSG00000248968.1]
WARNING, no entry stored in dbm for [ENSG00000235095.1]
WARNING, no entry stored in dbm for [ENSG00000229161.2]
WARNING, no entry stored in dbm for [ENSG00000268635.2]
WARNING, no entry stored in dbm for [ENSG00000256591.5]
WARNING, no entry stored in dbm for [ENSG00000254939.1]
WARNING, no entry stored in dbm for [ENSG00000285909.1]
WARNING, no entry stored in dbm for [ENSG00000280367.1]
WARNING, no entry stored in dbm for [ENSG00000225906.1]
WARNING, no entry stored in dbm for [ENSG00000254662.1]
WARNING, no entry stored in dbm for [ENSG00000226043.2]
WARNING, no entry stored in dbm for [ENSG00000283145.1]
WARNING, no entry stored in dbm for [ENSG00000249655.1]
WARNING, no entry stored in dbm for [ENSG00000274751.1]
WARNING, no entry stored in dbm for [ENSG00000230006.7]
WARNING, no entry stored in dbm for [ENSG00000266931.2]
WARNING, no entry stored in dbm for [ENSG00000172342.5]
WARNING, no entry stored in dbm for [ENSG00000230021.10]
WARNING, no entry stored in dbm for [ENSG00000181705.2]
WARNING, no entry stored in dbm for [ENSG00000228826.3]
WARNING, no entry stored in dbm for [ENSG00000270780.1]
WARNING, no entry stored in dbm for [ENSG00000234589.4]
WARNING, no entry stored in dbm for [ENSG00000223774.5]
WARNING, no entry stored in dbm for [ENSG00000232499.2]
WARNING, no entry stored in dbm for [ENSG00000230102.8]
WARNING, no entry stored in dbm for [ENSG00000217801.10]
WARNING, no entry stored in dbm for [ENSG00000213058.3]
WARNING, no entry stored in dbm for [ENSG00000286313.1]
WARNING, no entry stored in dbm for [ENSG00000237445.2]
WARNING, no entry stored in dbm for [ENSG00000236523.2]
WARNING, no entry stored in dbm for [ENSG00000227625.2]
WARNING, no entry stored in dbm for [ENSG00000213087.3]
WARNING, no entry stored in dbm for [ENSG00000260212.1]
WARNING, no entry stored in dbm for [ENSG00000285492.1]
WARNING, no entry stored in dbm for [ENSG00000234692.1]
WARNING, no entry stored in dbm for [ENSG00000286518.1]
WARNING, no entry stored in dbm for [ENSG00000276348.1]
WARNING, no entry stored in dbm for [ENSG00000286842.1]
WARNING, no entry stored in dbm for [ENSG00000197320.5]
WARNING, no entry stored in dbm for [ENSG00000286811.1]
WARNING, no entry stored in dbm for [ENSG00000233178.7]
WARNING, no entry stored in dbm for [ENSG00000230628.1]
WARNING, no entry stored in dbm for [ENSG00000230490.3]
WARNING, no entry stored in dbm for [ENSG00000230863.3]
WARNING, no entry stored in dbm for [ENSG00000240023.1]
WARNING, no entry stored in dbm for [ENSG00000237481.1]
WARNING, no entry stored in dbm for [ENSG00000286803.1]
WARNING, no entry stored in dbm for [ENSG00000288044.1]
WARNING, no entry stored in dbm for [ENSG00000228124.1]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000285690.1]
WARNING, no entry stored in dbm for [ENSG00000206066.3]
WARNING, no entry stored in dbm for [ENSG00000226310.1]
WARNING, no entry stored in dbm for [ENSG00000232599.1]
WARNING, no entry stored in dbm for [ENSG00000213107.2]
WARNING, no entry stored in dbm for [ENSG00000228819.1]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000253642.6]
WARNING, no entry stored in dbm for [ENSG00000225471.5]
WARNING, no entry stored in dbm for [ENSG00000237550.5]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000287978.1]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000274423.1]
WARNING, no entry stored in dbm for [ENSG00000277702.1]
WARNING, no entry stored in dbm for [ENSG00000277146.1]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000280114.1]
WARNING, no entry stored in dbm for [ENSG00000223779.6]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000218227.3]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000260507.1]
WARNING, no entry stored in dbm for [ENSG00000240808.1]
WARNING, no entry stored in dbm for [ENSG00000241282.1]
WARNING, no entry stored in dbm for [ENSG00000258334.1]
WARNING, no entry stored in dbm for [ENSG00000268555.2]
WARNING, no entry stored in dbm for [ENSG00000286619.1]
WARNING, no entry stored in dbm for [ENSG00000254186.3]
WARNING, no entry stored in dbm for [ENSG00000250410.1]
WARNING, no entry stored in dbm for [ENSG00000225846.4]
WARNING, no entry stored in dbm for [ENSG00000260066.1]
WARNING, no entry stored in dbm for [ENSG00000279658.1]
WARNING, no entry stored in dbm for [ENSG00000261444.1]
WARNING, no entry stored in dbm for [ENSG00000277458.1]
WARNING, no entry stored in dbm for [ENSG00000245213.7]
WARNING, no entry stored in dbm for [ENSG00000224479.6]
WARNING, no entry stored in dbm for [ENSG00000224479.6]
WARNING, no entry stored in dbm for [ENSG00000241462.1]
WARNING, no entry stored in dbm for [ENSG00000227615.1]
WARNING, no entry stored in dbm for [ENSG00000260236.1]
WARNING, no entry stored in dbm for [ENSG00000249642.2]
WARNING, no entry stored in dbm for [ENSG00000287129.1]
WARNING, no entry stored in dbm for [ENSG00000231646.6]
WARNING, no entry stored in dbm for [ENSG00000228303.1]
WARNING, no entry stored in dbm for [ENSG00000284687.1]
WARNING, no entry stored in dbm for [ENSG00000287860.1]
WARNING, no entry stored in dbm for [ENSG00000288568.1]
WARNING, no entry stored in dbm for [ENSG00000272953.1]
WARNING, no entry stored in dbm for [ENSG00000227224.1]
WARNING, no entry stored in dbm for [ENSG00000213216.2]
WARNING, no entry stored in dbm for [ENSG00000260337.4]
WARNING, no entry stored in dbm for [ENSG00000267198.1]
WARNING, no entry stored in dbm for [ENSG00000131484.4]
WARNING, no entry stored in dbm for [ENSG00000247728.2]
WARNING, no entry stored in dbm for [ENSG00000264497.1]
WARNING, no entry stored in dbm for [ENSG00000262879.6]
WARNING, no entry stored in dbm for [ENSG00000264164.1]
WARNING, no entry stored in dbm for [ENSG00000272134.1]
WARNING, no entry stored in dbm for [ENSG00000279259.1]
WARNING, no entry stored in dbm for [ENSG00000259722.2]
WARNING, no entry stored in dbm for [ENSG00000263244.2]
WARNING, no entry stored in dbm for [ENSG00000275834.1]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000239300.6]
WARNING, no entry stored in dbm for [ENSG00000232633.4]
WARNING, no entry stored in dbm for [ENSG00000257545.5]
WARNING, no entry stored in dbm for [ENSG00000279917.1]
WARNING, no entry stored in dbm for [ENSG00000250031.1]
WARNING, no entry stored in dbm for [ENSG00000225205.5]
WARNING, no entry stored in dbm for [ENSG00000283236.1]
WARNING, no entry stored in dbm for [ENSG00000242299.1]
WARNING, no entry stored in dbm for [ENSG00000225831.1]
WARNING, no entry stored in dbm for [ENSG00000288663.1]
WARNING, no entry stored in dbm for [ENSG00000275223.1]
WARNING, no entry stored in dbm for [ENSG00000287896.1]
WARNING, no entry stored in dbm for [ENSG00000237773.7]
WARNING, no entry stored in dbm for [ENSG00000250316.1]
WARNING, no entry stored in dbm for [ENSG00000283674.3]
WARNING, no entry stored in dbm for [ENSG00000283674.3]
WARNING, no entry stored in dbm for [ENSG00000280353.1]
WARNING, no entry stored in dbm for [ENSG00000223884.7]
WARNING, no entry stored in dbm for [ENSG00000256389.2]
WARNING, no entry stored in dbm for [ENSG00000250031.1]
WARNING, no entry stored in dbm for [ENSG00000229212.8]
WARNING, no entry stored in dbm for [ENSG00000189136.9]
WARNING, no entry stored in dbm for [ENSG00000257817.2]
WARNING, no entry stored in dbm for [ENSG00000286388.1]
WARNING, no entry stored in dbm for [ENSG00000246214.2]
WARNING, no entry stored in dbm for [ENSG00000273658.1]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000272800.3]
WARNING, no entry stored in dbm for [ENSG00000240975.1]
WARNING, no entry stored in dbm for [ENSG00000259160.1]
WARNING, no entry stored in dbm for [ENSG00000240418.1]
WARNING, no entry stored in dbm for [ENSG00000240418.1]
WARNING, no entry stored in dbm for [ENSG00000271333.1]
WARNING, no entry stored in dbm for [ENSG00000250723.7]
WARNING, no entry stored in dbm for [ENSG00000249429.1]
WARNING, no entry stored in dbm for [ENSG00000267605.7]
WARNING, no entry stored in dbm for [ENSG00000267605.7]
WARNING, no entry stored in dbm for [ENSG00000270964.1]
WARNING, no entry stored in dbm for [ENSG00000225335.3]
WARNING, no entry stored in dbm for [ENSG00000279069.1]
WARNING, no entry stored in dbm for [ENSG00000267078.1]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000224081.9]
WARNING, no entry stored in dbm for [ENSG00000227252.2]
WARNING, no entry stored in dbm for [ENSG00000258017.2]
WARNING, no entry stored in dbm for [ENSG00000250526.1]
WARNING, no entry stored in dbm for [ENSG00000267574.1]
WARNING, no entry stored in dbm for [ENSG00000264515.6]
WARNING, no entry stored in dbm for [ENSG00000255106.1]
WARNING, no entry stored in dbm for [ENSG00000241741.1]
WARNING, no entry stored in dbm for [ENSG00000251506.1]
WARNING, no entry stored in dbm for [ENSG00000271259.1]
WARNING, no entry stored in dbm for [ENSG00000111788.10]
WARNING, no entry stored in dbm for [ENSG00000256377.6]
WARNING, no entry stored in dbm for [ENSG00000234825.3]
WARNING, no entry stored in dbm for [ENSG00000259877.2]
WARNING, no entry stored in dbm for [ENSG00000214331.8]
WARNING, no entry stored in dbm for [ENSG00000237705.1]
WARNING, no entry stored in dbm for [ENSG00000254170.1]
WARNING, no entry stored in dbm for [ENSG00000237875.1]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000267714.2]
WARNING, no entry stored in dbm for [ENSG00000287603.1]
WARNING, no entry stored in dbm for [ENSG00000259124.1]
WARNING, no entry stored in dbm for [ENSG00000259124.1]
WARNING, no entry stored in dbm for [ENSG00000239246.3]
WARNING, no entry stored in dbm for [ENSG00000262202.4]
WARNING, no entry stored in dbm for [ENSG00000279249.3]
WARNING, no entry stored in dbm for [ENSG00000277458.1]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000277458.1]
WARNING, no entry stored in dbm for [ENSG00000236540.7]
WARNING, no entry stored in dbm for [ENSG00000283214.1]
WARNING, no entry stored in dbm for [ENSG00000254099.1]
WARNING, no entry stored in dbm for [ENSG00000226040.3]
WARNING, no entry stored in dbm for [ENSG00000267623.3]
WARNING, no entry stored in dbm for [ENSG00000274712.2]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000268069.2]
WARNING, no entry stored in dbm for [ENSG00000243560.3]
WARNING, no entry stored in dbm for [ENSG00000287292.1]
WARNING, no entry stored in dbm for [ENSG00000251595.7]


	* STAR-Fusion complete.  See output: /tmp/nxf.5rvr5BZFgt/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)