Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/43/7f4c5da07297196ffce3188c5f0fde/.command.sh
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/43/7f4c5da07297196ffce3188c5f0fde/.command.run
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b6/3f73c718abb61c37defc32a7f1af8b/BVT_FFPE_TRNA_skn_01_A23WKFTLT4_3_2.fastp.fastq.gz
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b6/3f73c718abb61c37defc32a7f1af8b/BVT_FFPE_TRNA_skn_01_A23WKFTLT4_3_1.fastp.fastq.gz
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d4/cf739620a517f63abc0b2f3a1523c1/BVT_FFPE_TRNA_skn_01_A23WKFTLT4_3.Chimeric.out.junction
==> STAGING COMPLETE (6 inputs)
-ctat genome lib [/tmp/nxf.EnkRvZ1fHU/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.EnkRvZ1fHU/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.EnkRvZ1fHU/./star-fusion.preliminary
-sample contains 210938935 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.EnkRvZ1fHU/ctat_genome_lib_build_dir -J /tmp/nxf.EnkRvZ1fHU/BVT_FFPE_TRNA_skn_01_A23WKFTLT4_3.Chimeric.out.junction -O /tmp/nxf.EnkRvZ1fHU/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4
-parsing fusion evidence: /tmp/nxf.EnkRvZ1fHU/BVT_FFPE_TRNA_skn_01_A23WKFTLT4_3.Chimeric.out.junction
-building interval tree based on /tmp/nxf.EnkRvZ1fHU/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
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[2170000], rate=27898.01/min -building interval tree based on /tmp/nxf.EnkRvZ1fHU/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
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[2170000], rate=27538.07/min -building interval tree based on /tmp/nxf.EnkRvZ1fHU/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
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[2180000], rate=26715.69/min -building interval tree based on /tmp/nxf.EnkRvZ1fHU/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
[10000], rate=85714.29/min
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[2160000], rate=23060.50/min
[2170000], rate=23138.44/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.EnkRvZ1fHU/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.EnkRvZ1fHU/ctat_genome_lib_build_dir --filt_file /tmp/nxf.EnkRvZ1fHU/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.EnkRvZ1fHU/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-parsing /tmp/nxf.EnkRvZ1fHU/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.
6000000.00 reads per min processed...
6000000.00 reads per min processed...
6000000.00 reads per min processed...
6000000.00 reads per min processed...
5000000.00 reads per min processed...
4500000.00 reads per min processed...
4200000.00 reads per min processed...
4000000.00 reads per min processed...
4153846.15 reads per min processed...
4000000.00 reads per min processed...
4125000.00 reads per min processed...
4000000.00 reads per min processed...
4105263.16 reads per min processed...
4000000.00 reads per min processed...
3913043.48 reads per min processed...
4000000.00 reads per min processed...
3923076.92 reads per min processed...
3857142.86 reads per min processed...
3931034.48 reads per min processed...
3870967.74 reads per min processed...
3937500.00 reads per min processed...
3882352.94 reads per min processed...
3833333.33 reads per min processed...
3789473.68 reads per min processed...
3846153.85 reads per min processed...
3804878.05 reads per min processed...
3767441.86 reads per min processed...
3652173.91 reads per min processed...
3625000.00 reads per min processed...
3673469.39 reads per min processed...
3647058.82 reads per min processed...
3622641.51 reads per min processed...
3666666.67 reads per min processed...
3642857.14 reads per min processed...
3620689.66 reads per min processed...
3661016.95 reads per min processed...
3639344.26 reads per min processed...
3677419.35 reads per min processed...
3656250.00 reads per min processed...
3692307.69 reads per min processed...
3671641.79 reads per min processed...
3705882.35 reads per min processed...
3685714.29 reads per min processed...
3718309.86 reads per min processed...
3698630.14 reads per min processed...
3729729.73 reads per min processed...
3760000.00 reads per min processed...
3840000.00 reads per min processed...
3818181.82 reads per min processed...
3846153.85 reads per min processed...
3825000.00 reads per min processed...
3851851.85 reads per min processed...
3831325.30 reads per min processed...
3857142.86 reads per min processed...
3837209.30 reads per min processed...
3862068.97 reads per min processed...
3842696.63 reads per min processed...
3824175.82 reads per min processed...
3847826.09 reads per min processed...
3789473.68 reads per min processed...
3812500.00 reads per min processed...
3835051.55 reads per min processed...
3818181.82 reads per min processed...
3801980.20 reads per min processed...
3823529.41 reads per min processed...
3807692.31 reads per min processed...
3828571.43 reads per min processed...
3813084.11 reads per min processed...
3798165.14 reads per min processed...
3818181.82 reads per min processed...
3803571.43 reads per min processed...
3823008.85 reads per min processed...
done.
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.EnkRvZ1fHU/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.EnkRvZ1fHU/./star-fusion.preliminary/star-fusion
-parsing fusion evidence: /tmp/nxf.EnkRvZ1fHU/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.EnkRvZ1fHU/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.EnkRvZ1fHU/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.EnkRvZ1fHU/BVT_FFPE_TRNA_skn_01_A23WKFTLT4_3.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.EnkRvZ1fHU/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.EnkRvZ1fHU/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.EnkRvZ1fHU/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -194169.247781
EM: Round [1] log likelihood: -194070.347360
EM: Round [2] log likelihood: -194027.589063
EM: Round [3] log likelihood: -194005.760015
EM: Round [4] log likelihood: -193994.010900
EM: Round [5] log likelihood: -193987.506873
EM: Round [6] log likelihood: -193983.799165
EM: Round [7] log likelihood: -193981.611544
EM: Round [8] log likelihood: -193980.271810
EM: Round [9] log likelihood: -193979.420009
EM: Round [10] log likelihood: -193978.858583
EM: Round [11] log likelihood: -193978.475881
EM: Round [12] log likelihood: -193978.206816
EM: Round [13] log likelihood: -193978.012271
EM: Round [14] log likelihood: -193977.868027
EM: Round [15] log likelihood: -193977.758663
EM: Round [16] log likelihood: -193977.674092
EM: Round [17] log likelihood: -193977.607548
EM: Round [18] log likelihood: -193977.554389
EM: Round [19] log likelihood: -193977.511352
EM: Round [20] log likelihood: -193977.476104
EM: Round [21] log likelihood: -193977.446941
EM: Round [22] log likelihood: -193977.422595
EM: Round [23] log likelihood: -193977.402112
EM: Round [24] log likelihood: -193977.384759
EM: Round [25] log likelihood: -193977.369969
EM: Round [26] log likelihood: -193977.357293
EM: Round [27] log likelihood: -193977.346377
EM: Round [28] log likelihood: -193977.336936
EM: Round [29] log likelihood: -193977.328736
EM: Round [30] log likelihood: -193977.321590
EM: Round [31] log likelihood: -193977.315340
EM: Round [32] log likelihood: -193977.309857
EM: Round [33] log likelihood: -193977.305033
EM: Round [34] log likelihood: -193977.300778
EM: Round [35] log likelihood: -193977.297013
EM: Round [36] log likelihood: -193977.293674
EM: Round [37] log likelihood: -193977.290707
EM: Round [38] log likelihood: -193977.288063
EM: Round [39] log likelihood: -193977.285702
EM: Round [40] log likelihood: -193977.283588
EM: Round [41] log likelihood: -193977.281693
EM: Round [42] log likelihood: -193977.279990
EM: Round [43] log likelihood: -193977.278455
EM: Round [44] log likelihood: -193977.277071
EM: Round [45] log likelihood: -193977.275818
EM: Round [46] log likelihood: -193977.274683
EM: Round [47] log likelihood: -193977.273653
EM: Round [48] log likelihood: -193977.272715
EM: Round [49] log likelihood: -193977.271861
EM: Round [50] log likelihood: -193977.271081
EM: Round [51] log likelihood: -193977.270366
EM: Round [52] log likelihood: -193977.269712
EM: Round [53] log likelihood: -193977.269110
EM: Round [54] log likelihood: -193977.268557
EM: Round [55] log likelihood: -193977.268047
EM: Round [56] log likelihood: -193977.267576
EM: Round [57] log likelihood: -193977.267140
EM: Round [58] log likelihood: -193977.266736
EM: Round [59] log likelihood: -193977.266362
EM: Round [60] log likelihood: -193977.266013
EM: Round [61] log likelihood: -193977.265688
EM: Round [62] log likelihood: -193977.265386
EM: Round [63] log likelihood: -193977.265103
EM: Round [64] log likelihood: -193977.264839
EM: Round [65] log likelihood: -193977.264591
EM: Round [66] log likelihood: -193977.264358
EM: Round [67] log likelihood: -193977.264140
EM: Round [68] log likelihood: -193977.263934
EM: Round [69] log likelihood: -193977.263741
EM: Round [70] log likelihood: -193977.263559
EM: Round [71] log likelihood: -193977.263386
EM: Round [72] log likelihood: -193977.263224
EM: Round [73] log likelihood: -193977.263070
EM: Round [74] log likelihood: -193977.262924
EM: Round [75] log likelihood: -193977.262786
EM: Round [76] log likelihood: -193977.262655
EM: Round [77] log likelihood: -193977.262531
EM: Round [78] log likelihood: -193977.262412
EM: Round [79] log likelihood: -193977.262300
EM: Round [80] log likelihood: -193977.262193
EM: Round [81] log likelihood: -193977.262091
EM: Round [82] log likelihood: -193977.261994
EM: Stopping iterations at round 82 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -194105.628469
EM: Round [1] log likelihood: -194014.720079
EM: Round [2] log likelihood: -193976.730707
EM: Round [3] log likelihood: -193957.785969
EM: Round [4] log likelihood: -193947.745756
EM: Round [5] log likelihood: -193942.238789
EM: Round [6] log likelihood: -193939.113579
EM: Round [7] log likelihood: -193937.272933
EM: Round [8] log likelihood: -193936.146646
EM: Round [9] log likelihood: -193935.431291
EM: Round [10] log likelihood: -193934.960610
EM: Round [11] log likelihood: -193934.640568
EM: Round [12] log likelihood: -193934.416270
EM: Round [13] log likelihood: -193934.254671
EM: Round [14] log likelihood: -193934.135296
EM: Round [15] log likelihood: -193934.045107
EM: Round [16] log likelihood: -193933.975580
EM: Round [17] log likelihood: -193933.921012
EM: Round [18] log likelihood: -193933.877494
EM: Round [19] log likelihood: -193933.842295
EM: Round [20] log likelihood: -193933.813466
EM: Round [21] log likelihood: -193933.789592
EM: Round [22] log likelihood: -193933.769627
EM: Round [23] log likelihood: -193933.752786
EM: Round [24] log likelihood: -193933.738471
EM: Round [25] log likelihood: -193933.726222
EM: Round [26] log likelihood: -193933.715677
EM: Round [27] log likelihood: -193933.706550
EM: Round [28] log likelihood: -193933.698612
EM: Round [29] log likelihood: -193933.691680
EM: Round [30] log likelihood: -193933.685601
EM: Round [31] log likelihood: -193933.680253
EM: Round [32] log likelihood: -193933.675531
EM: Round [33] log likelihood: -193933.671350
EM: Round [34] log likelihood: -193933.667638
EM: Round [35] log likelihood: -193933.664333
EM: Round [36] log likelihood: -193933.661384
EM: Round [37] log likelihood: -193933.658746
EM: Round [38] log likelihood: -193933.656381
EM: Round [39] log likelihood: -193933.654256
EM: Round [40] log likelihood: -193933.652343
EM: Round [41] log likelihood: -193933.650618
EM: Round [42] log likelihood: -193933.649059
EM: Round [43] log likelihood: -193933.647646
EM: Round [44] log likelihood: -193933.646365
EM: Round [45] log likelihood: -193933.645201
EM: Round [46] log likelihood: -193933.644141
EM: Round [47] log likelihood: -193933.643174
EM: Round [48] log likelihood: -193933.642291
EM: Round [49] log likelihood: -193933.641482
EM: Round [50] log likelihood: -193933.640740
EM: Round [51] log likelihood: -193933.640059
EM: Round [52] log likelihood: -193933.639433
EM: Round [53] log likelihood: -193933.638855
EM: Round [54] log likelihood: -193933.638322
EM: Round [55] log likelihood: -193933.637829
EM: Round [56] log likelihood: -193933.637373
EM: Round [57] log likelihood: -193933.636950
EM: Round [58] log likelihood: -193933.636557
EM: Round [59] log likelihood: -193933.636191
EM: Round [60] log likelihood: -193933.635850
EM: Round [61] log likelihood: -193933.635532
EM: Round [62] log likelihood: -193933.635235
EM: Round [63] log likelihood: -193933.634957
EM: Round [64] log likelihood: -193933.634697
EM: Round [65] log likelihood: -193933.634452
EM: Round [66] log likelihood: -193933.634223
EM: Round [67] log likelihood: -193933.634007
EM: Round [68] log likelihood: -193933.633804
EM: Round [69] log likelihood: -193933.633612
EM: Round [70] log likelihood: -193933.633431
EM: Round [71] log likelihood: -193933.633260
EM: Round [72] log likelihood: -193933.633099
EM: Round [73] log likelihood: -193933.632946
EM: Round [74] log likelihood: -193933.632801
EM: Round [75] log likelihood: -193933.632664
EM: Round [76] log likelihood: -193933.632533
EM: Round [77] log likelihood: -193933.632409
EM: Round [78] log likelihood: -193933.632292
EM: Round [79] log likelihood: -193933.632179
EM: Round [80] log likelihood: -193933.632073
EM: Round [81] log likelihood: -193933.631971
EM: Round [82] log likelihood: -193933.631874
EM: Stopping iterations at round 82 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.EnkRvZ1fHU/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.EnkRvZ1fHU/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.EnkRvZ1fHU/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.EnkRvZ1fHU/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.EnkRvZ1fHU/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.EnkRvZ1fHU/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.EnkRvZ1fHU/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20
CMD: cp /tmp/nxf.EnkRvZ1fHU/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.EnkRvZ1fHU/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.EnkRvZ1fHU/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.EnkRvZ1fHU/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.EnkRvZ1fHU/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.EnkRvZ1fHU/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.EnkRvZ1fHU/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 210938935 > /tmp/nxf.EnkRvZ1fHU/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.EnkRvZ1fHU/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.EnkRvZ1fHU/ctat_genome_lib_build_dir > /tmp/nxf.EnkRvZ1fHU/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.EnkRvZ1fHU/ctat_genome_lib_build_dir --annotate /tmp/nxf.EnkRvZ1fHU/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.EnkRvZ1fHU/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.EnkRvZ1fHU/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.EnkRvZ1fHU/ctat_genome_lib_build_dir
-done, see /tmp/nxf.EnkRvZ1fHU/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.EnkRvZ1fHU/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.EnkRvZ1fHU/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 1420, filtered: 11805)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.EnkRvZ1fHU/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.EnkRvZ1fHU/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.EnkRvZ1fHU/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [ENSG00000245958.6]
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WARNING, no entry stored in dbm for [ENSG00000227192.1]
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WARNING, no entry stored in dbm for [ENSG00000248375.1]
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WARNING, no entry stored in dbm for [ENSG00000229235.1]
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WARNING, no entry stored in dbm for [ENSG00000255815.3]
WARNING, no entry stored in dbm for [ENSG00000240128.1]
WARNING, no entry stored in dbm for [ENSG00000214822.8]
WARNING, no entry stored in dbm for [ENSG00000215908.10]
WARNING, no entry stored in dbm for [ENSG00000227706.4]
WARNING, no entry stored in dbm for [ENSG00000256721.1]
WARNING, no entry stored in dbm for [ENSG00000230732.4]
WARNING, no entry stored in dbm for [ENSG00000214823.3]
WARNING, no entry stored in dbm for [ENSG00000272871.1]
WARNING, no entry stored in dbm for [ENSG00000226409.3]
WARNING, no entry stored in dbm for [ENSG00000222041.11]
WARNING, no entry stored in dbm for [ENSG00000232729.8]
WARNING, no entry stored in dbm for [ENSG00000231523.1]
WARNING, no entry stored in dbm for [ENSG00000226488.2]
WARNING, no entry stored in dbm for [ENSG00000223383.1]
WARNING, no entry stored in dbm for [ENSG00000230583.7]
WARNING, no entry stored in dbm for [ENSG00000270094.1]
WARNING, no entry stored in dbm for [ENSG00000227885.3]
WARNING, no entry stored in dbm for [ENSG00000172297.7]
WARNING, no entry stored in dbm for [ENSG00000260062.3]
WARNING, no entry stored in dbm for [ENSG00000181984.11]
WARNING, no entry stored in dbm for [ENSG00000241621.1]
WARNING, no entry stored in dbm for [ENSG00000229608.1]
WARNING, no entry stored in dbm for [ENSG00000230773.9]
WARNING, no entry stored in dbm for [ENSG00000250903.9]
WARNING, no entry stored in dbm for [ENSG00000225685.1]
WARNING, no entry stored in dbm for [ENSG00000254349.6]
WARNING, no entry stored in dbm for [ENSG00000229195.1]
WARNING, no entry stored in dbm for [ENSG00000230482.1]
WARNING, no entry stored in dbm for [ENSG00000285410.1]
WARNING, no entry stored in dbm for [ENSG00000216917.2]
WARNING, no entry stored in dbm for [ENSG00000237550.5]
WARNING, no entry stored in dbm for [ENSG00000266691.1]
WARNING, no entry stored in dbm for [ENSG00000249937.8]
WARNING, no entry stored in dbm for [ENSG00000228146.8]
WARNING, no entry stored in dbm for [ENSG00000088340.17]
WARNING, no entry stored in dbm for [ENSG00000282995.1]
WARNING, no entry stored in dbm for [ENSG00000233064.2]
WARNING, no entry stored in dbm for [ENSG00000230368.2]
WARNING, no entry stored in dbm for [ENSG00000231528.3]
WARNING, no entry stored in dbm for [ENSG00000236438.7]
WARNING, no entry stored in dbm for [ENSG00000214856.11]
WARNING, no entry stored in dbm for [ENSG00000264044.1]
WARNING, no entry stored in dbm for [ENSG00000234690.7]
WARNING, no entry stored in dbm for [ENSG00000204623.9]
WARNING, no entry stored in dbm for [ENSG00000220505.2]
WARNING, no entry stored in dbm for [ENSG00000184029.9]
WARNING, no entry stored in dbm for [ENSG00000241361.8]
WARNING, no entry stored in dbm for [ENSG00000231382.1]
WARNING, no entry stored in dbm for [ENSG00000231607.13]
WARNING, no entry stored in dbm for [ENSG00000176124.15]
WARNING, no entry stored in dbm for [ENSG00000231672.8]
WARNING, no entry stored in dbm for [ENSG00000267125.2]
WARNING, no entry stored in dbm for [ENSG00000257612.2]
WARNING, no entry stored in dbm for [ENSG00000231890.8]
WARNING, no entry stored in dbm for [ENSG00000234741.8]
WARNING, no entry stored in dbm for [ENSG00000214369.2]
WARNING, no entry stored in dbm for [ENSG00000243818.5]
WARNING, no entry stored in dbm for [ENSG00000224188.1]
WARNING, no entry stored in dbm for [ENSG00000230408.3]
WARNING, no entry stored in dbm for [ENSG00000268945.1]
WARNING, no entry stored in dbm for [ENSG00000272050.1]
WARNING, no entry stored in dbm for [ENSG00000278932.4]
WARNING, no entry stored in dbm for [ENSG00000240216.7]
WARNING, no entry stored in dbm for [ENSG00000264538.6]
WARNING, no entry stored in dbm for [ENSG00000224533.4]
WARNING, no entry stored in dbm for [ENSG00000260765.2]
WARNING, no entry stored in dbm for [ENSG00000224854.3]
WARNING, no entry stored in dbm for [ENSG00000213644.2]
WARNING, no entry stored in dbm for [ENSG00000246211.2]
WARNING, no entry stored in dbm for [ENSG00000255443.1]
WARNING, no entry stored in dbm for [ENSG00000286641.1]
WARNING, no entry stored in dbm for [ENSG00000240869.3]
WARNING, no entry stored in dbm for [ENSG00000268532.1]
WARNING, no entry stored in dbm for [ENSG00000280515.1]
WARNING, no entry stored in dbm for [ENSG00000259230.1]
WARNING, no entry stored in dbm for [ENSG00000261738.7]
WARNING, no entry stored in dbm for [ENSG00000221953.5]
WARNING, no entry stored in dbm for [ENSG00000237238.3]
WARNING, no entry stored in dbm for [ENSG00000233967.7]
WARNING, no entry stored in dbm for [ENSG00000185689.17]
WARNING, no entry stored in dbm for [ENSG00000213701.4]
WARNING, no entry stored in dbm for [ENSG00000213081.3]
WARNING, no entry stored in dbm for [ENSG00000271147.8]
WARNING, no entry stored in dbm for [ENSG00000238045.9]
WARNING, no entry stored in dbm for [ENSG00000277693.2]
WARNING, no entry stored in dbm for [ENSG00000266373.1]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000215559.8]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000215559.8]
WARNING, no entry stored in dbm for [ENSG00000266456.1]
WARNING, no entry stored in dbm for [ENSG00000267108.1]
WARNING, no entry stored in dbm for [ENSG00000219529.2]
WARNING, no entry stored in dbm for [ENSG00000239393.1]
WARNING, no entry stored in dbm for [ENSG00000257002.1]
WARNING, no entry stored in dbm for [ENSG00000246465.1]
WARNING, no entry stored in dbm for [ENSG00000285106.2]
WARNING, no entry stored in dbm for [ENSG00000248336.1]
WARNING, no entry stored in dbm for [ENSG00000235707.2]
WARNING, no entry stored in dbm for [ENSG00000274080.1]
WARNING, no entry stored in dbm for [ENSG00000230021.10]
WARNING, no entry stored in dbm for [ENSG00000230021.10]
WARNING, no entry stored in dbm for [ENSG00000285799.1]
WARNING, no entry stored in dbm for [ENSG00000254741.1]
WARNING, no entry stored in dbm for [ENSG00000270780.1]
WARNING, no entry stored in dbm for [ENSG00000234589.4]
WARNING, no entry stored in dbm for [ENSG00000284640.1]
WARNING, no entry stored in dbm for [ENSG00000280060.1]
WARNING, no entry stored in dbm for [ENSG00000225854.2]
WARNING, no entry stored in dbm for [ENSG00000232858.1]
WARNING, no entry stored in dbm for [ENSG00000276248.1]
WARNING, no entry stored in dbm for [ENSG00000226438.1]
WARNING, no entry stored in dbm for [ENSG00000227619.3]
WARNING, no entry stored in dbm for [ENSG00000270719.1]
WARNING, no entry stored in dbm for [ENSG00000250090.1]
WARNING, no entry stored in dbm for [ENSG00000226609.2]
WARNING, no entry stored in dbm for [ENSG00000228685.1]
WARNING, no entry stored in dbm for [ENSG00000234851.4]
WARNING, no entry stored in dbm for [ENSG00000280425.2]
WARNING, no entry stored in dbm for [ENSG00000219240.2]
WARNING, no entry stored in dbm for [ENSG00000226530.2]
WARNING, no entry stored in dbm for [ENSG00000230490.3]
WARNING, no entry stored in dbm for [ENSG00000233379.2]
WARNING, no entry stored in dbm for [ENSG00000283773.1]
WARNING, no entry stored in dbm for [ENSG00000287708.1]
WARNING, no entry stored in dbm for [ENSG00000274602.5]
WARNING, no entry stored in dbm for [ENSG00000258875.6]
WARNING, no entry stored in dbm for [ENSG00000240131.1]
WARNING, no entry stored in dbm for [ENSG00000279175.1]
WARNING, no entry stored in dbm for [ENSG00000229757.2]
WARNING, no entry stored in dbm for [ENSG00000242445.1]
WARNING, no entry stored in dbm for [ENSG00000260425.1]
WARNING, no entry stored in dbm for [ENSG00000260532.1]
WARNING, no entry stored in dbm for [ENSG00000215022.7]
WARNING, no entry stored in dbm for [ENSG00000276633.1]
WARNING, no entry stored in dbm for [ENSG00000287918.1]
WARNING, no entry stored in dbm for [ENSG00000231965.4]
WARNING, no entry stored in dbm for [ENSG00000212664.5]
WARNING, no entry stored in dbm for [ENSG00000256350.1]
WARNING, no entry stored in dbm for [ENSG00000275613.2]
WARNING, no entry stored in dbm for [ENSG00000277702.1]
WARNING, no entry stored in dbm for [ENSG00000277146.1]
WARNING, no entry stored in dbm for [ENSG00000287215.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000256546.2]
WARNING, no entry stored in dbm for [ENSG00000283273.1]
WARNING, no entry stored in dbm for [ENSG00000238035.8]
WARNING, no entry stored in dbm for [ENSG00000250999.2]
WARNING, no entry stored in dbm for [ENSG00000250999.2]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000250060.2]
WARNING, no entry stored in dbm for [ENSG00000253392.3]
WARNING, no entry stored in dbm for [ENSG00000253392.3]
WARNING, no entry stored in dbm for [ENSG00000204789.4]
WARNING, no entry stored in dbm for [ENSG00000253392.3]
WARNING, no entry stored in dbm for [ENSG00000233836.7]
WARNING, no entry stored in dbm for [ENSG00000253392.3]
WARNING, no entry stored in dbm for [ENSG00000233836.7]
WARNING, no entry stored in dbm for [ENSG00000274653.1]
WARNING, no entry stored in dbm for [ENSG00000230698.1]
WARNING, no entry stored in dbm for [ENSG00000223991.1]
WARNING, no entry stored in dbm for [ENSG00000282375.1]
WARNING, no entry stored in dbm for [ENSG00000286436.1]
WARNING, no entry stored in dbm for [ENSG00000241860.7]
WARNING, no entry stored in dbm for [ENSG00000267669.1]
WARNING, no entry stored in dbm for [ENSG00000229119.3]
WARNING, no entry stored in dbm for [ENSG00000246541.2]
WARNING, no entry stored in dbm for [ENSG00000228999.4]
WARNING, no entry stored in dbm for [ENSG00000260805.2]
WARNING, no entry stored in dbm for [ENSG00000268362.6]
WARNING, no entry stored in dbm for [ENSG00000261235.1]
WARNING, no entry stored in dbm for [ENSG00000285035.1]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000223482.8]
WARNING, no entry stored in dbm for [ENSG00000240687.2]
WARNING, no entry stored in dbm for [ENSG00000283355.1]
WARNING, no entry stored in dbm for [ENSG00000248206.2]
WARNING, no entry stored in dbm for [ENSG00000272368.2]
WARNING, no entry stored in dbm for [ENSG00000239985.2]
WARNING, no entry stored in dbm for [ENSG00000224365.1]
WARNING, no entry stored in dbm for [ENSG00000286401.1]
WARNING, no entry stored in dbm for [ENSG00000283674.3]
WARNING, no entry stored in dbm for [ENSG00000248618.1]
WARNING, no entry stored in dbm for [ENSG00000283674.3]
WARNING, no entry stored in dbm for [ENSG00000248618.1]
WARNING, no entry stored in dbm for [ENSG00000229212.8]
WARNING, no entry stored in dbm for [ENSG00000185641.6]
WARNING, no entry stored in dbm for [ENSG00000254485.5]
WARNING, no entry stored in dbm for [ENSG00000251062.1]
WARNING, no entry stored in dbm for [ENSG00000216854.2]
WARNING, no entry stored in dbm for [ENSG00000270992.1]
WARNING, no entry stored in dbm for [ENSG00000233565.1]
WARNING, no entry stored in dbm for [ENSG00000240669.1]
WARNING, no entry stored in dbm for [ENSG00000270352.1]
WARNING, no entry stored in dbm for [ENSG00000254777.5]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000272267.2]
WARNING, no entry stored in dbm for [ENSG00000271049.1]
WARNING, no entry stored in dbm for [ENSG00000226380.9]
WARNING, no entry stored in dbm for [ENSG00000261329.6]
WARNING, no entry stored in dbm for [ENSG00000264112.1]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000285870.1]
WARNING, no entry stored in dbm for [ENSG00000267589.1]
WARNING, no entry stored in dbm for [ENSG00000249839.1]
WARNING, no entry stored in dbm for [ENSG00000228033.6]
WARNING, no entry stored in dbm for [ENSG00000286608.1]
WARNING, no entry stored in dbm for [ENSG00000279598.1]
WARNING, no entry stored in dbm for [ENSG00000236503.1]
WARNING, no entry stored in dbm for [ENSG00000260905.1]
WARNING, no entry stored in dbm for [ENSG00000284671.1]
WARNING, no entry stored in dbm for [ENSG00000240388.2]
WARNING, no entry stored in dbm for [ENSG00000235934.2]
WARNING, no entry stored in dbm for [ENSG00000263345.1]
WARNING, no entry stored in dbm for [ENSG00000229180.7]
WARNING, no entry stored in dbm for [ENSG00000226824.7]
WARNING, no entry stored in dbm for [ENSG00000226040.3]
WARNING, no entry stored in dbm for [ENSG00000267623.3]
WARNING, no entry stored in dbm for [ENSG00000256706.1]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000241057.2]
WARNING, no entry stored in dbm for [ENSG00000244560.7]
WARNING, no entry stored in dbm for [ENSG00000257955.1]
WARNING, no entry stored in dbm for [ENSG00000241764.4]
WARNING, no entry stored in dbm for [ENSG00000240216.7]
WARNING, no entry stored in dbm for [ENSG00000213228.5]
WARNING, no entry stored in dbm for [ENSG00000268895.6]
WARNING, no entry stored in dbm for [ENSG00000267275.1]
* STAR-Fusion complete. See output: /tmp/nxf.EnkRvZ1fHU/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)