Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ca/a60abc8bba469f1210d001de2a9373/BVT_FFPE_TRNA_bld_01_A23WKFTLT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e4/6802e5b20cb9d64d80ab801507ee46/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e4/6802e5b20cb9d64d80ab801507ee46/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory