[W::hts_idx_load3] The index file is older than the data file: BVT_FFPE_TRNA_bst_01_02_A23WKFTLT4_1.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file:  ref_annot.bed  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	205924620
Known Splicing Events:	203688136
Partial Novel Splicing Events:	1070844
Novel Splicing Events:	1030991
Filtered Splicing Events:	134649

Total splicing  Junctions:	440869
Known Splicing Junctions:	234984
Partial Novel Splicing Junctions:	94138
Novel Splicing Junctions:	111747

===================================================================
Create BED file ...
Create Interact file ...