-ctat genome lib [/tmp/nxf.99uiQWnAdB/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.99uiQWnAdB/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.99uiQWnAdB/./star-fusion.preliminary
-sample contains 295077472 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.99uiQWnAdB/ctat_genome_lib_build_dir  -J /tmp/nxf.99uiQWnAdB/BVT_FFPE_TRNA_stm_09_A23WKFTLT4_3.Chimeric.out.junction  -O /tmp/nxf.99uiQWnAdB/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.99uiQWnAdB/BVT_FFPE_TRNA_stm_09_A23WKFTLT4_3.Chimeric.out.junction
-building interval tree based on /tmp/nxf.99uiQWnAdB/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

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-building interval tree based on /tmp/nxf.99uiQWnAdB/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

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[2840000], rate=46091.43/min 
[2850000], rate=46153.85/min 
[2860000], rate=46228.45/min 
[2870000], rate=46315.22/min 
[2880000], rate=46401.72/min 
[2890000], rate=46487.94/min 
[2900000], rate=46586.35/min 
[2910000], rate=46709.47/min 
[2920000], rate=46807.37/min 
[2930000], rate=46892.50/min 
[2940000], rate=46989.88/min 
[2950000], rate=47074.47/min 
[2960000], rate=47158.79/min [2720000], rate=45727.09/min 
[2730000], rate=45818.18/min 
[2740000], rate=45908.96/min 
[2750000], rate=45986.62/min 
[2760000], rate=46089.62/min 
[2770000], rate=46179.49/min 
[2780000], rate=46269.07/min 
[2790000], rate=46358.35/min 
[2800000], rate=46408.84/min 
[2810000], rate=46356.89/min 
[2820000], rate=46305.42/min 
[2830000], rate=46241.83/min 
[2840000], rate=46178.86/min 
[2850000], rate=46166.31/min 
[2860000], rate=46153.85/min 
[2870000], rate=46153.85/min 
[2880000], rate=46153.85/min 
[2890000], rate=46153.85/min 
[2900000], rate=46178.34/min 
[2910000], rate=46190.48/min 
[2920000], rate=46214.72/min 
[2930000], rate=46226.66/min 
[2940000], rate=46274.92/min 
[2950000], rate=46310.83/min 
[2960000], rate=46358.65/min -building interval tree based on /tmp/nxf.99uiQWnAdB/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

[10000], rate=66666.67/min 
[20000], rate=75000.00/min 
[30000], rate=78260.87/min 
[40000], rate=88888.89/min 
[50000], rate=85714.29/min 
[60000], rate=87804.88/min 
[70000], rate=89361.70/min 
[80000], rate=85714.29/min 
[90000], rate=80597.01/min 
[100000], rate=64516.13/min 
[110000], rate=58407.08/min 
[120000], rate=57142.86/min 
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[150000], rate=50561.80/min 
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[350000], rate=53435.11/min 
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[610000], rate=60495.87/min 
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[780000], rate=62151.39/min 
[790000], rate=61960.78/min 
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[810000], rate=59778.60/min 
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[830000], rate=58934.91/min 
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[850000], rate=59164.73/min 
[860000], rate=59310.34/min 
[870000], rate=59318.18/min 
[880000], rate=59661.02/min 
[890000], rate=59865.47/min 
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[910000], rate=60398.23/min 
[920000], rate=59804.98/min 
[930000], rate=57113.61/min 
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[950000], rate=54545.45/min 
[960000], rate=54084.51/min 
[970000], rate=53789.28/min 
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[990000], rate=53083.11/min 
[1000000], rate=52863.44/min 
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[1190000], rate=41975.31/min 
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[1370000], rate=39767.78/min 
[1380000], rate=39826.84/min 
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[1420000], rate=40094.12/min 
[1430000], rate=40206.19/min 
[1440000], rate=40336.13/min 
[1450000], rate=40408.73/min 
[1460000], rate=40146.65/min 
[1470000], rate=39747.63/min 
[1480000], rate=39519.36/min 
[1490000], rate=39331.28/min 
[1500000], rate=39352.86/min 
[1510000], rate=39237.77/min 
[1520000], rate=39327.30/min 
[1530000], rate=39432.99/min 
[1540000], rate=39554.79/min 
[1550000], rate=39675.77/min 
[1560000], rate=39795.92/min 
[1570000], rate=39949.11/min 
[1580000], rate=40084.57/min 
[1590000], rate=40253.16/min 
[1600000], rate=40387.04/min 
[1610000], rate=40537.14/min 
[1620000], rate=40669.46/min 
[1630000], rate=40835.07/min 
[1640000], rate=40982.92/min 
[1650000], rate=41130.04/min 
[1660000], rate=41259.32/min 
[1670000], rate=41404.96/min 
[1680000], rate=41481.48/min 
[1690000], rate=41036.02/min 
[1700000], rate=40816.33/min 
[1710000], rate=40601.50/min 
[1720000], rate=40391.39/min 
[1730000], rate=40248.16/min 
[1740000], rate=39832.13/min 
[1750000], rate=39179.10/min 
[1760000], rate=38795.00/min 
[1770000], rate=38520.13/min 
[1780000], rate=38472.62/min 
[1790000], rate=38085.11/min 
[1800000], rate=37894.74/min 
[1810000], rate=37800.21/min 
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[1840000], rate=37679.18/min 
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[1870000], rate=37688.95/min 
[1880000], rate=37675.35/min 
[1890000], rate=37674.42/min 
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[1920000], rate=37708.67/min 
[1930000], rate=37769.08/min 
[1940000], rate=37816.76/min 
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[1960000], rate=37996.77/min 
[1970000], rate=38067.63/min 
[1980000], rate=38138.04/min 
[1990000], rate=38220.23/min 
[2000000], rate=38289.73/min 
[2010000], rate=38395.42/min 
[2020000], rate=38463.98/min 
[2030000], rate=38580.93/min 
[2040000], rate=38672.99/min 
[2050000], rate=38740.16/min 
[2060000], rate=38806.91/min 
[2070000], rate=38861.08/min 
[2080000], rate=38939.16/min 
[2090000], rate=38992.54/min 
[2100000], rate=39057.66/min 
[2110000], rate=39122.37/min 
[2120000], rate=39198.77/min 
[2130000], rate=39262.67/min 
[2140000], rate=39302.11/min 
[2150000], rate=39341.26/min 
[2160000], rate=39392.10/min 
[2170000], rate=39442.59/min 
[2180000], rate=39528.56/min 
[2190000], rate=39590.24/min 
[2200000], rate=39675.38/min 
[2210000], rate=39748.20/min 
[2220000], rate=39820.63/min 
[2230000], rate=39904.56/min 
[2240000], rate=40000.00/min 
[2250000], rate=40095.04/min 
[2260000], rate=40189.69/min 
[2270000], rate=40283.94/min 
[2280000], rate=40377.80/min 
[2290000], rate=40471.28/min 
[2300000], rate=40564.37/min 
[2310000], rate=40669.01/min 
[2320000], rate=40773.29/min 
[2330000], rate=40865.24/min 
[2340000], rate=40968.78/min 
[2350000], rate=41071.95/min 
[2360000], rate=41162.79/min 
[2370000], rate=41265.24/min 
[2380000], rate=41355.34/min 
[2390000], rate=41469.06/min 
[2400000], rate=41546.45/min 
[2410000], rate=41623.49/min 
[2420000], rate=41724.14/min 
[2430000], rate=41884.52/min 
[2440000], rate=42044.80/min 
[2450000], rate=42132.42/min 
[2460000], rate=42219.68/min 
[2470000], rate=42306.59/min 
[2480000], rate=42405.24/min 
[2490000], rate=42491.47/min 
[2500000], rate=42589.44/min 
[2510000], rate=42699.18/min 
[2520000], rate=42639.59/min 
[2530000], rate=42449.66/min 
[2540000], rate=42298.08/min 
[2550000], rate=42113.96/min 
[2560000], rate=41978.68/min 
[2570000], rate=41845.32/min 
[2580000], rate=41747.57/min 
[2590000], rate=41662.20/min 
[2600000], rate=41544.61/min 
[2610000], rate=41472.46/min 
[2620000], rate=41444.77/min 
[2630000], rate=41428.20/min 
[2640000], rate=41400.94/min 
[2650000], rate=41373.93/min 
[2660000], rate=41336.44/min 
[2670000], rate=41331.27/min 
[2680000], rate=41304.91/min 
[2690000], rate=41331.63/min 
[2700000], rate=41326.53/min 
[2710000], rate=41353.00/min 
[2720000], rate=41389.80/min 
[2730000], rate=41395.00/min 
[2740000], rate=41410.58/min 
[2750000], rate=41415.66/min 
[2760000], rate=41431.07/min 
[2770000], rate=41456.72/min 
[2780000], rate=41482.22/min 
[2790000], rate=41517.86/min 
[2800000], rate=41543.03/min 
[2810000], rate=41578.30/min 
[2820000], rate=41603.15/min 
[2830000], rate=41627.85/min 
[2840000], rate=41672.78/min 
[2850000], rate=41707.32/min 
[2860000], rate=41721.37/min 
[2870000], rate=41765.70/min 
[2880000], rate=41850.33/min 
[2890000], rate=41894.18/min 
[2900000], rate=41968.16/min 
[2910000], rate=42062.15/min 
[2920000], rate=42105.26/min 
[2930000], rate=42148.17/min 
[2940000], rate=42200.96/min 
[2950000], rate=42243.44/min -building interval tree based on /tmp/nxf.99uiQWnAdB/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

[10000], rate=50000.00/min 
[20000], rate=60000.00/min 
[30000], rate=85714.29/min 
[40000], rate=104347.83/min 
[50000], rate=103448.28/min 
[60000], rate=97297.30/min 
[70000], rate=113513.51/min 
[80000], rate=126315.79/min 
[90000], rate=128571.43/min 
[100000], rate=130434.78/min 
[110000], rate=143478.26/min 
[120000], rate=150000.00/min 
[130000], rate=125806.45/min 
[140000], rate=113513.51/min 
[150000], rate=120000.00/min 
[160000], rate=121518.99/min 
[170000], rate=112087.91/min 
[180000], rate=105882.35/min 
[190000], rate=110679.61/min 
[200000], rate=116504.85/min 
[210000], rate=117757.01/min 
[220000], rate=120000.00/min 
[230000], rate=125454.55/min 
[240000], rate=129729.73/min 
[250000], rate=128205.13/min 
[260000], rate=122834.65/min 
[270000], rate=118248.18/min 
[280000], rate=120863.31/min 
[290000], rate=123404.26/min 
[300000], rate=123287.67/min 
[310000], rate=120779.22/min 
[320000], rate=123870.97/min 
[330000], rate=126923.08/min 
[340000], rate=124390.24/min 
[350000], rate=125748.50/min 
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[380000], rate=126666.67/min 
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[400000], rate=124352.33/min 
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[440000], rate=130049.26/min 
[450000], rate=131067.96/min 
[460000], rate=104545.45/min 
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[480000], rate=65603.64/min 
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[560000], rate=36721.31/min 
[570000], rate=34897.96/min 
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[610000], rate=30198.02/min 
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[650000], rate=27738.26/min 
[660000], rate=27385.89/min 
[670000], rate=26569.73/min 
[680000], rate=25757.58/min 
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[700000], rate=25392.99/min 
[710000], rate=24854.14/min 
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[790000], rate=22560.69/min 
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[820000], rate=21712.27/min 
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[870000], rate=20805.10/min 
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[910000], rate=21097.37/min 
[920000], rate=21141.33/min 
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[960000], rate=21500.56/min 
[970000], rate=21539.60/min 
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[1000000], rate=21482.28/min 
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[1060000], rate=21938.60/min 
[1070000], rate=22001.37/min 
[1080000], rate=22078.36/min 
[1090000], rate=22049.90/min 
[1100000], rate=22080.96/min 
[1110000], rate=22177.82/min 
[1120000], rate=22251.66/min 
[1130000], rate=22354.10/min 
[1140000], rate=22463.05/min 
[1150000], rate=22578.53/min 
[1160000], rate=22700.59/min 
[1170000], rate=22821.85/min 
[1180000], rate=22957.20/min 
[1190000], rate=23084.38/min 
[1200000], rate=23210.83/min 
[1210000], rate=23336.55/min 
[1220000], rate=23469.06/min 
[1230000], rate=23600.90/min 
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[1250000], rate=23870.15/min 
[1260000], rate=24000.00/min 
[1270000], rate=24136.84/min 
[1280000], rate=24280.75/min 
[1290000], rate=24424.11/min 
[1300000], rate=24551.46/min 
[1310000], rate=24693.69/min 
[1320000], rate=24827.59/min 
[1330000], rate=24976.53/min 
[1340000], rate=25101.47/min 
[1350000], rate=25147.47/min 
[1360000], rate=25200.74/min 
[1370000], rate=25253.46/min 
[1380000], rate=25328.85/min 
[1390000], rate=25411.33/min 
[1400000], rate=25493.17/min 
[1410000], rate=25574.37/min 
[1420000], rate=25654.92/min 
[1430000], rate=25742.57/min 
[1440000], rate=25837.32/min 
[1450000], rate=25931.45/min 
[1460000], rate=26040.43/min 
[1470000], rate=26156.58/min 
[1480000], rate=26264.42/min 
[1490000], rate=26379.46/min 
[1500000], rate=26478.38/min 
[1510000], rate=26576.71/min 
[1520000], rate=26682.27/min 
[1530000], rate=26795.10/min 
[1540000], rate=26907.40/min 
[1550000], rate=27019.17/min 
[1560000], rate=27130.43/min 
[1570000], rate=27241.18/min 
[1580000], rate=27359.31/min 
[1590000], rate=27476.96/min 
[1600000], rate=27594.14/min 
[1610000], rate=27710.84/min 
[1620000], rate=27827.08/min 
[1630000], rate=27942.86/min 
[1640000], rate=28074.18/min 
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[1660000], rate=28327.65/min 
[1670000], rate=28465.91/min 
[1680000], rate=28603.86/min 
[1690000], rate=28741.50/min 
[1700000], rate=28870.65/min 
[1710000], rate=28999.43/min 
[1720000], rate=29127.86/min 
[1730000], rate=29198.31/min 
[1740000], rate=29137.59/min 
[1750000], rate=29093.93/min 
[1760000], rate=29050.89/min 
[1770000], rate=29000.55/min 
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[1790000], rate=28917.61/min 
[1800000], rate=28923.41/min 
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[1820000], rate=28919.49/min 
[1830000], rate=28970.98/min 
[1840000], rate=29006.83/min 
[1850000], rate=29057.59/min 
[1860000], rate=29107.98/min 
[1870000], rate=29158.00/min 
[1880000], rate=29207.66/min 
[1890000], rate=29256.97/min 
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[1910000], rate=29384.62/min 
[1920000], rate=29440.33/min 
[1930000], rate=29503.18/min 
[1940000], rate=29565.66/min 
[1950000], rate=29582.81/min 
[1960000], rate=29614.71/min 
[1970000], rate=29653.79/min 
[1980000], rate=29707.43/min 
[1990000], rate=29753.30/min 
[2000000], rate=29806.26/min 
[2010000], rate=29851.49/min 
[2020000], rate=29896.40/min 
[2030000], rate=29955.73/min 
[2040000], rate=30022.08/min 
[2050000], rate=30073.35/min 
[2060000], rate=30138.99/min 
[2070000], rate=30196.94/min 
[2080000], rate=30247.21/min 
[2090000], rate=30311.82/min 
[2100000], rate=30383.41/min 
[2110000], rate=30432.69/min 
[2120000], rate=30467.07/min 
[2130000], rate=30537.63/min 
[2140000], rate=30615.16/min 
[2150000], rate=30677.76/min 
[2160000], rate=30747.33/min 
[2170000], rate=30809.28/min 
[2180000], rate=30878.19/min 
[2190000], rate=30946.77/min 
[2200000], rate=31007.75/min 
[2210000], rate=31075.70/min 
[2220000], rate=31143.32/min 
[2230000], rate=31217.92/min 
[2240000], rate=31292.20/min 
[2250000], rate=31366.17/min 
[2260000], rate=31432.55/min 
[2270000], rate=31498.61/min 
[2280000], rate=31571.66/min 
[2290000], rate=31658.99/min 
[2300000], rate=31738.73/min 
[2310000], rate=31818.18/min 
[2320000], rate=31890.03/min 
[2330000], rate=31976.21/min 
[2340000], rate=32062.11/min 
[2350000], rate=32147.74/min 
[2360000], rate=32240.44/min 
[2370000], rate=32332.88/min 
[2380000], rate=32425.07/min 
[2390000], rate=32517.01/min 
[2400000], rate=32616.08/min 
[2410000], rate=32707.53/min 
[2420000], rate=32806.15/min 
[2430000], rate=32897.11/min 
[2440000], rate=32995.27/min 
[2450000], rate=33093.20/min 
[2460000], rate=33190.92/min 
[2470000], rate=33243.61/min 
[2480000], rate=33288.59/min 
[2490000], rate=33318.47/min 
[2500000], rate=33348.15/min 
[2510000], rate=33377.66/min 
[2520000], rate=33414.36/min 
[2530000], rate=33472.99/min 
[2540000], rate=33523.98/min 
[2550000], rate=33559.99/min 
[2560000], rate=33617.86/min 
[2570000], rate=33660.77/min 
[2580000], rate=33718.14/min 
[2590000], rate=33767.93/min 
[2600000], rate=33817.47/min 
[2610000], rate=33881.44/min 
[2620000], rate=33937.82/min 
[2630000], rate=33993.97/min 
[2640000], rate=34042.55/min 
[2650000], rate=34105.53/min 
[2660000], rate=34160.96/min 
[2670000], rate=34223.46/min 
[2680000], rate=34285.71/min 
[2690000], rate=34340.43/min 
[2700000], rate=34394.90/min 
[2710000], rate=34456.45/min 
[2720000], rate=34503.17/min 
[2730000], rate=34556.96/min 
[2740000], rate=34610.53/min 
[2750000], rate=34671.15/min 
[2760000], rate=34731.54/min 
[2770000], rate=34791.71/min 
[2780000], rate=34844.37/min 
[2790000], rate=34904.09/min 
[2800000], rate=34978.14/min 
[2810000], rate=35044.69/min 
[2820000], rate=35118.31/min 
[2830000], rate=35191.71/min 
[2840000], rate=35264.90/min 
[2850000], rate=35337.88/min 
[2860000], rate=35410.65/min 
[2870000], rate=35483.21/min 
[2880000], rate=35562.87/min 
[2890000], rate=35642.34/min 
[2900000], rate=35714.29/min 
[2910000], rate=35793.36/min 
[2920000], rate=35879.58/min 
[2930000], rate=35950.92/min 
[2940000], rate=36029.41/min 
[2950000], rate=36115.08/min 
[2960000], rate=36193.19/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.99uiQWnAdB/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.99uiQWnAdB/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.99uiQWnAdB/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.99uiQWnAdB/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.99uiQWnAdB/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 0.00 reads per min processed...  
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 6857142.86 reads per min processed...  
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 4904347.83 reads per min processed...  
 4913793.10 reads per min processed...  
 4923076.92 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.99uiQWnAdB/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.99uiQWnAdB/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.99uiQWnAdB/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.99uiQWnAdB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.99uiQWnAdB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.99uiQWnAdB/BVT_FFPE_TRNA_stm_09_A23WKFTLT4_3.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.99uiQWnAdB/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.99uiQWnAdB/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.99uiQWnAdB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -368126.774250
EM: Round [1] log likelihood: -367875.935522
EM: Round [2] log likelihood: -367790.270409
EM: Round [3] log likelihood: -367749.303771
EM: Round [4] log likelihood: -367727.247567
EM: Round [5] log likelihood: -367714.647740
EM: Round [6] log likelihood: -367707.099713
EM: Round [7] log likelihood: -367702.361241
EM: Round [8] log likelihood: -367699.244337
EM: Round [9] log likelihood: -367697.100846
EM: Round [10] log likelihood: -367695.566197
EM: Round [11] log likelihood: -367694.428250
EM: Round [12] log likelihood: -367693.558974
EM: Round [13] log likelihood: -367692.878160
EM: Round [14] log likelihood: -367692.333694
EM: Round [15] log likelihood: -367691.890546
EM: Round [16] log likelihood: -367691.524432
EM: Round [17] log likelihood: -367691.218058
EM: Round [18] log likelihood: -367690.958806
EM: Round [19] log likelihood: -367690.737287
EM: Round [20] log likelihood: -367690.546380
EM: Round [21] log likelihood: -367690.380604
EM: Round [22] log likelihood: -367690.235678
EM: Round [23] log likelihood: -367690.108217
EM: Round [24] log likelihood: -367689.995511
EM: Round [25] log likelihood: -367689.895370
EM: Round [26] log likelihood: -367689.806006
EM: Round [27] log likelihood: -367689.725946
EM: Round [28] log likelihood: -367689.653966
EM: Round [29] log likelihood: -367689.589042
EM: Round [30] log likelihood: -367689.530308
EM: Round [31] log likelihood: -367689.477033
EM: Round [32] log likelihood: -367689.428589
EM: Round [33] log likelihood: -367689.384439
EM: Round [34] log likelihood: -367689.344118
EM: Round [35] log likelihood: -367689.307223
EM: Round [36] log likelihood: -367689.273402
EM: Round [37] log likelihood: -367689.242347
EM: Round [38] log likelihood: -367689.213789
EM: Round [39] log likelihood: -367689.187488
EM: Round [40] log likelihood: -367689.163233
EM: Round [41] log likelihood: -367689.140836
EM: Round [42] log likelihood: -367689.120131
EM: Round [43] log likelihood: -367689.100968
EM: Round [44] log likelihood: -367689.083214
EM: Round [45] log likelihood: -367689.066748
EM: Round [46] log likelihood: -367689.051462
EM: Round [47] log likelihood: -367689.037259
EM: Round [48] log likelihood: -367689.024051
EM: Round [49] log likelihood: -367689.011759
EM: Round [50] log likelihood: -367689.000309
EM: Round [51] log likelihood: -367688.989636
EM: Round [52] log likelihood: -367688.979681
EM: Round [53] log likelihood: -367688.970388
EM: Round [54] log likelihood: -367688.961708
EM: Round [55] log likelihood: -367688.953595
EM: Round [56] log likelihood: -367688.946009
EM: Round [57] log likelihood: -367688.938909
EM: Round [58] log likelihood: -367688.932262
EM: Round [59] log likelihood: -367688.926035
EM: Round [60] log likelihood: -367688.920198
EM: Round [61] log likelihood: -367688.914725
EM: Round [62] log likelihood: -367688.909589
EM: Round [63] log likelihood: -367688.904768
EM: Round [64] log likelihood: -367688.900240
EM: Round [65] log likelihood: -367688.895986
EM: Round [66] log likelihood: -367688.891986
EM: Round [67] log likelihood: -367688.888225
EM: Round [68] log likelihood: -367688.884685
EM: Round [69] log likelihood: -367688.881354
EM: Round [70] log likelihood: -367688.878216
EM: Round [71] log likelihood: -367688.875260
EM: Round [72] log likelihood: -367688.872474
EM: Round [73] log likelihood: -367688.869846
EM: Round [74] log likelihood: -367688.867368
EM: Round [75] log likelihood: -367688.865028
EM: Round [76] log likelihood: -367688.862820
EM: Round [77] log likelihood: -367688.860734
EM: Round [78] log likelihood: -367688.858762
EM: Round [79] log likelihood: -367688.856899
EM: Round [80] log likelihood: -367688.855136
EM: Round [81] log likelihood: -367688.853469
EM: Round [82] log likelihood: -367688.851890
EM: Round [83] log likelihood: -367688.850395
EM: Round [84] log likelihood: -367688.848979
EM: Round [85] log likelihood: -367688.847637
EM: Round [86] log likelihood: -367688.846365
EM: Round [87] log likelihood: -367688.845158
EM: Round [88] log likelihood: -367688.844012
EM: Round [89] log likelihood: -367688.842925
EM: Round [90] log likelihood: -367688.841892
EM: Round [91] log likelihood: -367688.840910
EM: Round [92] log likelihood: -367688.839977
EM: Round [93] log likelihood: -367688.839090
EM: Round [94] log likelihood: -367688.838245
EM: Round [95] log likelihood: -367688.837442
EM: Round [96] log likelihood: -367688.836676
EM: Round [97] log likelihood: -367688.835946
EM: Round [98] log likelihood: -367688.835251
EM: Round [99] log likelihood: -367688.834588
EM: Round [100] log likelihood: -367688.833955
EM: Round [101] log likelihood: -367688.833351
EM: Round [102] log likelihood: -367688.832774
EM: Round [103] log likelihood: -367688.832222
EM: Round [104] log likelihood: -367688.831695
EM: Round [105] log likelihood: -367688.831191
EM: Round [106] log likelihood: -367688.830709
EM: Round [107] log likelihood: -367688.830247
EM: Round [108] log likelihood: -367688.829804
EM: Round [109] log likelihood: -367688.829380
EM: Round [110] log likelihood: -367688.828974
EM: Round [111] log likelihood: -367688.828584
EM: Round [112] log likelihood: -367688.828210
EM: Round [113] log likelihood: -367688.827850
EM: Round [114] log likelihood: -367688.827505
EM: Round [115] log likelihood: -367688.827173
EM: Round [116] log likelihood: -367688.826854
EM: Round [117] log likelihood: -367688.826547
EM: Round [118] log likelihood: -367688.826252
EM: Round [119] log likelihood: -367688.825967
EM: Round [120] log likelihood: -367688.825693
EM: Round [121] log likelihood: -367688.825429
EM: Round [122] log likelihood: -367688.825174
EM: Round [123] log likelihood: -367688.824928
EM: Round [124] log likelihood: -367688.824691
EM: Round [125] log likelihood: -367688.824461
EM: Round [126] log likelihood: -367688.824240
EM: Round [127] log likelihood: -367688.824026
EM: Round [128] log likelihood: -367688.823819
EM: Round [129] log likelihood: -367688.823619
EM: Round [130] log likelihood: -367688.823425
EM: Round [131] log likelihood: -367688.823237
EM: Round [132] log likelihood: -367688.823055
EM: Round [133] log likelihood: -367688.822879
EM: Round [134] log likelihood: -367688.822709
EM: Round [135] log likelihood: -367688.822543
EM: Round [136] log likelihood: -367688.822382
EM: Round [137] log likelihood: -367688.822226
EM: Round [138] log likelihood: -367688.822075
EM: Round [139] log likelihood: -367688.821928
EM: Round [140] log likelihood: -367688.821785
EM: Round [141] log likelihood: -367688.821646
EM: Round [142] log likelihood: -367688.821511
EM: Round [143] log likelihood: -367688.821379
EM: Round [144] log likelihood: -367688.821251
EM: Round [145] log likelihood: -367688.821127
EM: Round [146] log likelihood: -367688.821006
EM: Round [147] log likelihood: -367688.820888
EM: Round [148] log likelihood: -367688.820773
EM: Round [149] log likelihood: -367688.820660
EM: Round [150] log likelihood: -367688.820551
EM: Round [151] log likelihood: -367688.820445
EM: Round [152] log likelihood: -367688.820341
EM: Round [153] log likelihood: -367688.820239
EM: Round [154] log likelihood: -367688.820140
EM: Stopping iterations at round 154 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -367455.946240
EM: Round [1] log likelihood: -367234.613540
EM: Round [2] log likelihood: -367162.198438
EM: Round [3] log likelihood: -367128.764610
EM: Round [4] log likelihood: -367111.149646
EM: Round [5] log likelihood: -367101.215720
EM: Round [6] log likelihood: -367095.318673
EM: Round [7] log likelihood: -367091.645721
EM: Round [8] log likelihood: -367089.247599
EM: Round [9] log likelihood: -367087.609986
EM: Round [10] log likelihood: -367086.445244
EM: Round [11] log likelihood: -367085.586955
EM: Round [12] log likelihood: -367084.935253
EM: Round [13] log likelihood: -367084.427903
EM: Round [14] log likelihood: -367084.024656
EM: Round [15] log likelihood: -367083.698548
EM: Round [16] log likelihood: -367083.430938
EM: Round [17] log likelihood: -367083.208567
EM: Round [18] log likelihood: -367083.021779
EM: Round [19] log likelihood: -367082.863385
EM: Round [20] log likelihood: -367082.727943
EM: Round [21] log likelihood: -367082.611262
EM: Round [22] log likelihood: -367082.510074
EM: Round [23] log likelihood: -367082.421797
EM: Round [24] log likelihood: -367082.344366
EM: Round [25] log likelihood: -367082.276118
EM: Round [26] log likelihood: -367082.215695
EM: Round [27] log likelihood: -367082.161984
EM: Round [28] log likelihood: -367082.114062
EM: Round [29] log likelihood: -367082.071160
EM: Round [30] log likelihood: -367082.032631
EM: Round [31] log likelihood: -367081.997928
EM: Round [32] log likelihood: -367081.966588
EM: Round [33] log likelihood: -367081.938214
EM: Round [34] log likelihood: -367081.912465
EM: Round [35] log likelihood: -367081.889048
EM: Round [36] log likelihood: -367081.867707
EM: Round [37] log likelihood: -367081.848221
EM: Round [38] log likelihood: -367081.830396
EM: Round [39] log likelihood: -367081.814063
EM: Round [40] log likelihood: -367081.799073
EM: Round [41] log likelihood: -367081.785294
EM: Round [42] log likelihood: -367081.772610
EM: Round [43] log likelihood: -367081.760918
EM: Round [44] log likelihood: -367081.750127
EM: Round [45] log likelihood: -367081.740153
EM: Round [46] log likelihood: -367081.730926
EM: Round [47] log likelihood: -367081.722378
EM: Round [48] log likelihood: -367081.714453
EM: Round [49] log likelihood: -367081.707096
EM: Round [50] log likelihood: -367081.700260
EM: Round [51] log likelihood: -367081.693903
EM: Round [52] log likelihood: -367081.687985
EM: Round [53] log likelihood: -367081.682472
EM: Round [54] log likelihood: -367081.677332
EM: Round [55] log likelihood: -367081.672535
EM: Round [56] log likelihood: -367081.668056
EM: Round [57] log likelihood: -367081.663870
EM: Round [58] log likelihood: -367081.659956
EM: Round [59] log likelihood: -367081.656293
EM: Round [60] log likelihood: -367081.652863
EM: Round [61] log likelihood: -367081.649650
EM: Round [62] log likelihood: -367081.646637
EM: Round [63] log likelihood: -367081.643811
EM: Round [64] log likelihood: -367081.641158
EM: Round [65] log likelihood: -367081.638667
EM: Round [66] log likelihood: -367081.636326
EM: Round [67] log likelihood: -367081.634126
EM: Round [68] log likelihood: -367081.632056
EM: Round [69] log likelihood: -367081.630109
EM: Round [70] log likelihood: -367081.628275
EM: Round [71] log likelihood: -367081.626548
EM: Round [72] log likelihood: -367081.624921
EM: Round [73] log likelihood: -367081.623386
EM: Round [74] log likelihood: -367081.621939
EM: Round [75] log likelihood: -367081.620574
EM: Round [76] log likelihood: -367081.619285
EM: Round [77] log likelihood: -367081.618067
EM: Round [78] log likelihood: -367081.616917
EM: Round [79] log likelihood: -367081.615829
EM: Round [80] log likelihood: -367081.614801
EM: Round [81] log likelihood: -367081.613828
EM: Round [82] log likelihood: -367081.612907
EM: Round [83] log likelihood: -367081.612036
EM: Round [84] log likelihood: -367081.611210
EM: Round [85] log likelihood: -367081.610427
EM: Round [86] log likelihood: -367081.609685
EM: Round [87] log likelihood: -367081.608981
EM: Round [88] log likelihood: -367081.608313
EM: Round [89] log likelihood: -367081.607679
EM: Round [90] log likelihood: -367081.607077
EM: Round [91] log likelihood: -367081.606505
EM: Round [92] log likelihood: -367081.605961
EM: Round [93] log likelihood: -367081.605444
EM: Round [94] log likelihood: -367081.604952
EM: Round [95] log likelihood: -367081.604484
EM: Round [96] log likelihood: -367081.604038
EM: Round [97] log likelihood: -367081.603613
EM: Round [98] log likelihood: -367081.603208
EM: Round [99] log likelihood: -367081.602821
EM: Round [100] log likelihood: -367081.602453
EM: Round [101] log likelihood: -367081.602101
EM: Round [102] log likelihood: -367081.601765
EM: Round [103] log likelihood: -367081.601444
EM: Round [104] log likelihood: -367081.601138
EM: Round [105] log likelihood: -367081.600844
EM: Round [106] log likelihood: -367081.600564
EM: Round [107] log likelihood: -367081.600295
EM: Round [108] log likelihood: -367081.600037
EM: Round [109] log likelihood: -367081.599791
EM: Round [110] log likelihood: -367081.599554
EM: Round [111] log likelihood: -367081.599328
EM: Round [112] log likelihood: -367081.599110
EM: Round [113] log likelihood: -367081.598901
EM: Round [114] log likelihood: -367081.598700
EM: Round [115] log likelihood: -367081.598507
EM: Round [116] log likelihood: -367081.598322
EM: Round [117] log likelihood: -367081.598143
EM: Round [118] log likelihood: -367081.597972
EM: Round [119] log likelihood: -367081.597806
EM: Round [120] log likelihood: -367081.597647
EM: Round [121] log likelihood: -367081.597493
EM: Round [122] log likelihood: -367081.597345
EM: Round [123] log likelihood: -367081.597202
EM: Round [124] log likelihood: -367081.597064
EM: Round [125] log likelihood: -367081.596931
EM: Round [126] log likelihood: -367081.596802
EM: Round [127] log likelihood: -367081.596677
EM: Round [128] log likelihood: -367081.596557
EM: Round [129] log likelihood: -367081.596440
EM: Round [130] log likelihood: -367081.596328
EM: Round [131] log likelihood: -367081.596218
EM: Round [132] log likelihood: -367081.596113
EM: Round [133] log likelihood: -367081.596010
EM: Round [134] log likelihood: -367081.595910
EM: Stopping iterations at round 134 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.99uiQWnAdB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.99uiQWnAdB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.99uiQWnAdB/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.99uiQWnAdB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.99uiQWnAdB/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.99uiQWnAdB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.99uiQWnAdB/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.99uiQWnAdB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.99uiQWnAdB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.99uiQWnAdB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.99uiQWnAdB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.99uiQWnAdB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.99uiQWnAdB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.99uiQWnAdB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 295077472 > /tmp/nxf.99uiQWnAdB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.99uiQWnAdB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.99uiQWnAdB/ctat_genome_lib_build_dir > /tmp/nxf.99uiQWnAdB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.99uiQWnAdB/ctat_genome_lib_build_dir --annotate /tmp/nxf.99uiQWnAdB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.99uiQWnAdB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.99uiQWnAdB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.99uiQWnAdB/ctat_genome_lib_build_dir
-done, see /tmp/nxf.99uiQWnAdB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.99uiQWnAdB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.99uiQWnAdB/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 2216, filtered: 13173)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.99uiQWnAdB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.99uiQWnAdB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.99uiQWnAdB/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [IGH.g@-ext]
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WARNING, no entry stored in dbm for [ENSG00000199270.1]
WARNING, no entry stored in dbm for [ENSG00000199334.1]
WARNING, no entry stored in dbm for [ENSG00000199910.1]
WARNING, no entry stored in dbm for [ENSG00000199352.1]
WARNING, no entry stored in dbm for [ENSG00000226203.2]
WARNING, no entry stored in dbm for [ENSG00000226571.2]
WARNING, no entry stored in dbm for [ENSG00000259539.1]
WARNING, no entry stored in dbm for [ENSG00000251442.6]
WARNING, no entry stored in dbm for [ENSG00000287394.1]
WARNING, no entry stored in dbm for [ENSG00000266504.1]
WARNING, no entry stored in dbm for [ENSG00000197536.11]
WARNING, no entry stored in dbm for [ENSG00000228636.3]
WARNING, no entry stored in dbm for [ENSG00000241288.8]
WARNING, no entry stored in dbm for [ENSG00000233858.4]
WARNING, no entry stored in dbm for [ENSG00000225057.2]
WARNING, no entry stored in dbm for [ENSG00000250754.6]
WARNING, no entry stored in dbm for [ENSG00000226320.6]
WARNING, no entry stored in dbm for [ENSG00000224910.2]
WARNING, no entry stored in dbm for [ENSG00000226476.6]
WARNING, no entry stored in dbm for [ENSG00000233008.6]
WARNING, no entry stored in dbm for [ENSG00000234928.1]
WARNING, no entry stored in dbm for [ENSG00000227755.1]
WARNING, no entry stored in dbm for [ENSG00000236052.2]
WARNING, no entry stored in dbm for [ENSG00000236052.2]
WARNING, no entry stored in dbm for [ENSG00000180861.9]
WARNING, no entry stored in dbm for [ENSG00000247213.7]
WARNING, no entry stored in dbm for [ENSG00000205628.4]
WARNING, no entry stored in dbm for [ENSG00000224259.7]
WARNING, no entry stored in dbm for [ENSG00000224259.7]
WARNING, no entry stored in dbm for [ENSG00000204588.5]
WARNING, no entry stored in dbm for [ENSG00000175772.11]
WARNING, no entry stored in dbm for [ENSG00000249464.6]
WARNING, no entry stored in dbm for [ENSG00000264247.2]
WARNING, no entry stored in dbm for [ENSG00000215190.9]
WARNING, no entry stored in dbm for [ENSG00000226067.7]
WARNING, no entry stored in dbm for [ENSG00000231690.3]
WARNING, no entry stored in dbm for [ENSG00000223685.6]
WARNING, no entry stored in dbm for [ENSG00000276476.3]
WARNING, no entry stored in dbm for [ENSG00000197503.4]
WARNING, no entry stored in dbm for [ENSG00000224924.7]
WARNING, no entry stored in dbm for [ENSG00000223806.8]
WARNING, no entry stored in dbm for [ENSG00000273344.1]
WARNING, no entry stored in dbm for [ENSG00000256465.1]
WARNING, no entry stored in dbm for [ENSG00000260731.1]
WARNING, no entry stored in dbm for [ENSG00000214659.4]
WARNING, no entry stored in dbm for [ENSG00000266820.1]
WARNING, no entry stored in dbm for [ENSG00000263647.1]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000230646.1]
WARNING, no entry stored in dbm for [ENSG00000225025.2]
WARNING, no entry stored in dbm for [ENSG00000236991.6]
WARNING, no entry stored in dbm for [ENSG00000250980.1]
WARNING, no entry stored in dbm for [ENSG00000250980.1]
WARNING, no entry stored in dbm for [ENSG00000225470.8]
WARNING, no entry stored in dbm for [ENSG00000242899.1]
WARNING, no entry stored in dbm for [ENSG00000225137.1]
WARNING, no entry stored in dbm for [ENSG00000213062.5]
WARNING, no entry stored in dbm for [ENSG00000286177.1]
WARNING, no entry stored in dbm for [ENSG00000254363.6]
WARNING, no entry stored in dbm for [ENSG00000235253.1]
WARNING, no entry stored in dbm for [ENSG00000230645.2]
WARNING, no entry stored in dbm for [ENSG00000237638.2]
WARNING, no entry stored in dbm for [ENSG00000285219.2]
WARNING, no entry stored in dbm for [ENSG00000285219.2]
WARNING, no entry stored in dbm for [ENSG00000225057.2]
WARNING, no entry stored in dbm for [ENSG00000231535.7]
WARNING, no entry stored in dbm for [ENSG00000220867.1]
WARNING, no entry stored in dbm for [ENSG00000225158.2]
WARNING, no entry stored in dbm for [ENSG00000234878.1]
WARNING, no entry stored in dbm for [ENSG00000259706.1]
WARNING, no entry stored in dbm for [ENSG00000230647.2]
WARNING, no entry stored in dbm for [ENSG00000223855.2]
WARNING, no entry stored in dbm for [ENSG00000223855.2]
WARNING, no entry stored in dbm for [ENSG00000263072.8]
WARNING, no entry stored in dbm for [ENSG00000275029.1]
WARNING, no entry stored in dbm for [ENSG00000285257.1]
WARNING, no entry stored in dbm for [ENSG00000243753.5]
WARNING, no entry stored in dbm for [ENSG00000250091.3]
WARNING, no entry stored in dbm for [ENSG00000205464.13]
WARNING, no entry stored in dbm for [ENSG00000226002.1]
WARNING, no entry stored in dbm for [ENSG00000227113.2]
WARNING, no entry stored in dbm for [ENSG00000242808.10]
WARNING, no entry stored in dbm for [ENSG00000224286.6]
WARNING, no entry stored in dbm for [ENSG00000232354.8]
WARNING, no entry stored in dbm for [ENSG00000247708.8]
WARNING, no entry stored in dbm for [ENSG00000225408.1]
WARNING, no entry stored in dbm for [ENSG00000214433.4]
WARNING, no entry stored in dbm for [ENSG00000228998.4]
WARNING, no entry stored in dbm for [ENSG00000243066.3]
WARNING, no entry stored in dbm for [ENSG00000271986.2]
WARNING, no entry stored in dbm for [ENSG00000244692.3]
WARNING, no entry stored in dbm for [ENSG00000242315.3]
WARNING, no entry stored in dbm for [ENSG00000239224.3]
WARNING, no entry stored in dbm for [ENSG00000243426.3]
WARNING, no entry stored in dbm for [ENSG00000242493.3]
WARNING, no entry stored in dbm for [ENSG00000243738.3]
WARNING, no entry stored in dbm for [ENSG00000286511.1]
WARNING, no entry stored in dbm for [ENSG00000251463.2]
WARNING, no entry stored in dbm for [ENSG00000287429.1]
WARNING, no entry stored in dbm for [ENSG00000275340.1]
WARNING, no entry stored in dbm for [ENSG00000250057.1]
WARNING, no entry stored in dbm for [ENSG00000287144.1]
WARNING, no entry stored in dbm for [ENSG00000215873.2]
WARNING, no entry stored in dbm for [ENSG00000229321.2]
WARNING, no entry stored in dbm for [ENSG00000231528.3]
WARNING, no entry stored in dbm for [ENSG00000259203.2]
WARNING, no entry stored in dbm for [ENSG00000214439.4]
WARNING, no entry stored in dbm for [ENSG00000236438.7]
WARNING, no entry stored in dbm for [ENSG00000231584.8]
WARNING, no entry stored in dbm for [ENSG00000215604.3]
WARNING, no entry stored in dbm for [ENSG00000258785.6]
WARNING, no entry stored in dbm for [ENSG00000286933.1]
WARNING, no entry stored in dbm for [ENSG00000214210.4]
WARNING, no entry stored in dbm for [ENSG00000224406.6]
WARNING, no entry stored in dbm for [ENSG00000185684.15]
WARNING, no entry stored in dbm for [ENSG00000226688.7]
WARNING, no entry stored in dbm for [ENSG00000215319.2]
WARNING, no entry stored in dbm for [ENSG00000179523.5]
WARNING, no entry stored in dbm for [ENSG00000259972.3]
WARNING, no entry stored in dbm for [ENSG00000219565.2]
WARNING, no entry stored in dbm for [ENSG00000245750.10]
WARNING, no entry stored in dbm for [ENSG00000286900.1]
WARNING, no entry stored in dbm for [ENSG00000272601.1]
WARNING, no entry stored in dbm for [ENSG00000237720.2]
WARNING, no entry stored in dbm for [ENSG00000177337.8]
WARNING, no entry stored in dbm for [ENSG00000177337.8]
WARNING, no entry stored in dbm for [ENSG00000275202.1]
WARNING, no entry stored in dbm for [ENSG00000254275.6]
WARNING, no entry stored in dbm for [ENSG00000233547.1]
WARNING, no entry stored in dbm for [ENSG00000257612.2]
WARNING, no entry stored in dbm for [ENSG00000258725.2]
WARNING, no entry stored in dbm for [ENSG00000230630.5]
WARNING, no entry stored in dbm for [ENSG00000266075.2]
WARNING, no entry stored in dbm for [ENSG00000253107.1]
WARNING, no entry stored in dbm for [ENSG00000226950.8]
WARNING, no entry stored in dbm for [ENSG00000226950.8]
WARNING, no entry stored in dbm for [ENSG00000280145.3]
WARNING, no entry stored in dbm for [ENSG00000266575.1]
WARNING, no entry stored in dbm for [ENSG00000279432.1]
WARNING, no entry stored in dbm for [ENSG00000266573.6]
WARNING, no entry stored in dbm for [ENSG00000242193.11]
WARNING, no entry stored in dbm for [ENSG00000242193.11]
WARNING, no entry stored in dbm for [ENSG00000233025.1]
WARNING, no entry stored in dbm for [ENSG00000254697.1]
WARNING, no entry stored in dbm for [ENSG00000235499.1]
WARNING, no entry stored in dbm for [ENSG00000230470.1]
WARNING, no entry stored in dbm for [ENSG00000215908.10]
WARNING, no entry stored in dbm for [ENSG00000264063.1]
WARNING, no entry stored in dbm for [ENSG00000261801.6]
WARNING, no entry stored in dbm for [ENSG00000226989.1]
WARNING, no entry stored in dbm for [ENSG00000218868.1]
WARNING, no entry stored in dbm for [ENSG00000232223.1]
WARNING, no entry stored in dbm for [ENSG00000213149.3]
WARNING, no entry stored in dbm for [ENSG00000286788.1]
WARNING, no entry stored in dbm for [ENSG00000284634.1]
WARNING, no entry stored in dbm for [ENSG00000285278.1]
WARNING, no entry stored in dbm for [ENSG00000259755.1]
WARNING, no entry stored in dbm for [ENSG00000178977.3]
WARNING, no entry stored in dbm for [ENSG00000283317.1]
WARNING, no entry stored in dbm for [ENSG00000283360.1]
WARNING, no entry stored in dbm for [ENSG00000286084.2]
WARNING, no entry stored in dbm for [ENSG00000272888.7]
WARNING, no entry stored in dbm for [ENSG00000260765.2]
WARNING, no entry stored in dbm for [ENSG00000226937.9]
WARNING, no entry stored in dbm for [ENSG00000246366.6]
WARNING, no entry stored in dbm for [ENSG00000270111.3]
WARNING, no entry stored in dbm for [ENSG00000241832.1]
WARNING, no entry stored in dbm for [ENSG00000279092.1]
WARNING, no entry stored in dbm for [ENSG00000226906.1]
WARNING, no entry stored in dbm for [ENSG00000254166.3]
WARNING, no entry stored in dbm for [ENSG00000267270.6]
WARNING, no entry stored in dbm for [ENSG00000229097.1]
WARNING, no entry stored in dbm for [ENSG00000229021.2]
WARNING, no entry stored in dbm for [ENSG00000214424.5]
WARNING, no entry stored in dbm for [ENSG00000188511.12]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000249642.2]
WARNING, no entry stored in dbm for [ENSG00000285683.2]
WARNING, no entry stored in dbm for [ENSG00000232699.3]
WARNING, no entry stored in dbm for [ENSG00000279022.1]
WARNING, no entry stored in dbm for [ENSG00000233967.7]
WARNING, no entry stored in dbm for [ENSG00000225264.3]
WARNING, no entry stored in dbm for [ENSG00000233963.2]
WARNING, no entry stored in dbm for [ENSG00000235321.1]
WARNING, no entry stored in dbm for [ENSG00000205464.13]
WARNING, no entry stored in dbm for [ENSG00000251022.6]
WARNING, no entry stored in dbm for [ENSG00000269032.1]
WARNING, no entry stored in dbm for [ENSG00000279529.1]
WARNING, no entry stored in dbm for [ENSG00000228431.1]
WARNING, no entry stored in dbm for [ENSG00000228495.2]
WARNING, no entry stored in dbm for [ENSG00000226835.3]
WARNING, no entry stored in dbm for [ENSG00000266522.1]
WARNING, no entry stored in dbm for [ENSG00000256591.5]
WARNING, no entry stored in dbm for [ENSG00000256591.5]
WARNING, no entry stored in dbm for [ENSG00000254682.1]
WARNING, no entry stored in dbm for [ENSG00000242553.1]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000215559.8]
WARNING, no entry stored in dbm for [ENSG00000257002.1]
WARNING, no entry stored in dbm for [ENSG00000255291.2]
WARNING, no entry stored in dbm for [ENSG00000224309.7]
WARNING, no entry stored in dbm for [ENSG00000261098.1]
WARNING, no entry stored in dbm for [ENSG00000287516.1]
WARNING, no entry stored in dbm for [ENSG00000260848.2]
WARNING, no entry stored in dbm for [ENSG00000248809.6]
WARNING, no entry stored in dbm for [ENSG00000226899.1]
WARNING, no entry stored in dbm for [ENSG00000226899.1]
WARNING, no entry stored in dbm for [ENSG00000279910.1]
WARNING, no entry stored in dbm for [ENSG00000273192.1]
WARNING, no entry stored in dbm for [ENSG00000230092.7]
WARNING, no entry stored in dbm for [ENSG00000230021.10]
WARNING, no entry stored in dbm for [ENSG00000263756.1]
WARNING, no entry stored in dbm for [ENSG00000285799.1]
WARNING, no entry stored in dbm for [ENSG00000254741.1]
WARNING, no entry stored in dbm for [ENSG00000284740.1]
WARNING, no entry stored in dbm for [ENSG00000284999.1]
WARNING, no entry stored in dbm for [ENSG00000223599.1]
WARNING, no entry stored in dbm for [ENSG00000234336.7]
WARNING, no entry stored in dbm for [ENSG00000285691.2]
WARNING, no entry stored in dbm for [ENSG00000225096.3]
WARNING, no entry stored in dbm for [ENSG00000235749.3]
WARNING, no entry stored in dbm for [ENSG00000237445.2]
WARNING, no entry stored in dbm for [ENSG00000236523.2]
WARNING, no entry stored in dbm for [ENSG00000286215.1]
WARNING, no entry stored in dbm for [ENSG00000259001.3]
WARNING, no entry stored in dbm for [ENSG00000223834.5]
WARNING, no entry stored in dbm for [ENSG00000280296.1]
WARNING, no entry stored in dbm for [ENSG00000270038.1]
WARNING, no entry stored in dbm for [ENSG00000226578.1]
WARNING, no entry stored in dbm for [ENSG00000226812.2]
WARNING, no entry stored in dbm for [ENSG00000277287.1]
WARNING, no entry stored in dbm for [ENSG00000286288.1]
WARNING, no entry stored in dbm for [ENSG00000274760.1]
WARNING, no entry stored in dbm for [ENSG00000232848.1]
WARNING, no entry stored in dbm for [ENSG00000235163.2]
WARNING, no entry stored in dbm for [ENSG00000271746.1]
WARNING, no entry stored in dbm for [ENSG00000279833.1]
WARNING, no entry stored in dbm for [ENSG00000255182.2]
WARNING, no entry stored in dbm for [ENSG00000217612.2]
WARNING, no entry stored in dbm for [ENSG00000226310.1]
WARNING, no entry stored in dbm for [ENSG00000230912.1]
WARNING, no entry stored in dbm for [ENSG00000236065.2]
WARNING, no entry stored in dbm for [ENSG00000260316.2]
WARNING, no entry stored in dbm for [ENSG00000229700.1]
WARNING, no entry stored in dbm for [ENSG00000243744.2]
WARNING, no entry stored in dbm for [ENSG00000250546.6]
WARNING, no entry stored in dbm for [ENSG00000255085.8]
WARNING, no entry stored in dbm for [ENSG00000243289.1]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000265018.6]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000286681.1]
WARNING, no entry stored in dbm for [ENSG00000241473.1]
WARNING, no entry stored in dbm for [ENSG00000272779.1]
WARNING, no entry stored in dbm for [ENSG00000232527.8]
WARNING, no entry stored in dbm for [ENSG00000234981.1]
WARNING, no entry stored in dbm for [ENSG00000226448.1]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000272150.5]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000262413.1]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000198555.7]
WARNING, no entry stored in dbm for [ENSG00000276484.1]
WARNING, no entry stored in dbm for [ENSG00000276484.1]
WARNING, no entry stored in dbm for [ENSG00000276484.1]
WARNING, no entry stored in dbm for [ENSG00000276484.1]
WARNING, no entry stored in dbm for [ENSG00000258334.1]
WARNING, no entry stored in dbm for [ENSG00000266938.1]
WARNING, no entry stored in dbm for [ENSG00000244398.1]
WARNING, no entry stored in dbm for [ENSG00000242087.2]
WARNING, no entry stored in dbm for [ENSG00000248699.1]
WARNING, no entry stored in dbm for [ENSG00000234793.1]
WARNING, no entry stored in dbm for [ENSG00000278791.1]
WARNING, no entry stored in dbm for [ENSG00000261437.1]
WARNING, no entry stored in dbm for [ENSG00000288075.1]
WARNING, no entry stored in dbm for [ENSG00000180764.13]
WARNING, no entry stored in dbm for [ENSG00000245768.7]
WARNING, no entry stored in dbm for [ENSG00000245768.7]
WARNING, no entry stored in dbm for [ENSG00000237989.1]
WARNING, no entry stored in dbm for [ENSG00000224479.6]
WARNING, no entry stored in dbm for [ENSG00000230386.5]
WARNING, no entry stored in dbm for [ENSG00000259692.6]
WARNING, no entry stored in dbm for [ENSG00000262999.1]
WARNING, no entry stored in dbm for [ENSG00000249675.1]
WARNING, no entry stored in dbm for [ENSG00000246541.2]
WARNING, no entry stored in dbm for [ENSG00000260167.1]
WARNING, no entry stored in dbm for [ENSG00000248126.1]
WARNING, no entry stored in dbm for [ENSG00000248234.1]
WARNING, no entry stored in dbm for [ENSG00000233287.1]
WARNING, no entry stored in dbm for [ENSG00000239969.5]
WARNING, no entry stored in dbm for [ENSG00000235530.7]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000237666.2]
WARNING, no entry stored in dbm for [ENSG00000250546.6]
WARNING, no entry stored in dbm for [ENSG00000272368.2]
WARNING, no entry stored in dbm for [ENSG00000288663.1]
WARNING, no entry stored in dbm for [ENSG00000234129.8]
WARNING, no entry stored in dbm for [ENSG00000257616.1]
WARNING, no entry stored in dbm for [ENSG00000249545.1]
WARNING, no entry stored in dbm for [ENSG00000250220.1]
WARNING, no entry stored in dbm for [ENSG00000287623.1]
WARNING, no entry stored in dbm for [ENSG00000185641.6]
WARNING, no entry stored in dbm for [ENSG00000223703.1]
WARNING, no entry stored in dbm for [ENSG00000223703.1]
WARNING, no entry stored in dbm for [ENSG00000267317.2]
WARNING, no entry stored in dbm for [ENSG00000280138.1]
WARNING, no entry stored in dbm for [ENSG00000250764.1]
WARNING, no entry stored in dbm for [ENSG00000274021.1]
WARNING, no entry stored in dbm for [ENSG00000248515.2]
WARNING, no entry stored in dbm for [ENSG00000229229.1]
WARNING, no entry stored in dbm for [ENSG00000272800.3]
WARNING, no entry stored in dbm for [ENSG00000240418.1]
WARNING, no entry stored in dbm for [ENSG00000174171.6]
WARNING, no entry stored in dbm for [ENSG00000213963.6]
WARNING, no entry stored in dbm for [ENSG00000287847.1]
WARNING, no entry stored in dbm for [ENSG00000287313.1]
WARNING, no entry stored in dbm for [ENSG00000232377.1]
WARNING, no entry stored in dbm for [ENSG00000226380.9]
WARNING, no entry stored in dbm for [ENSG00000186148.13]
WARNING, no entry stored in dbm for [ENSG00000285710.1]
WARNING, no entry stored in dbm for [ENSG00000227252.2]
WARNING, no entry stored in dbm for [ENSG00000268475.1]
WARNING, no entry stored in dbm for [ENSG00000263818.5]
WARNING, no entry stored in dbm for [ENSG00000241281.1]
WARNING, no entry stored in dbm for [ENSG00000241281.1]
WARNING, no entry stored in dbm for [ENSG00000225963.8]
WARNING, no entry stored in dbm for [ENSG00000234162.3]
WARNING, no entry stored in dbm for [ENSG00000238045.9]
WARNING, no entry stored in dbm for [ENSG00000284671.1]
WARNING, no entry stored in dbm for [ENSG00000284649.1]
WARNING, no entry stored in dbm for [ENSG00000214331.8]
WARNING, no entry stored in dbm for [ENSG00000240388.2]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000231918.1]
WARNING, no entry stored in dbm for [ENSG00000277458.1]
WARNING, no entry stored in dbm for [ENSG00000158482.10]
WARNING, no entry stored in dbm for [ENSG00000279539.1]
WARNING, no entry stored in dbm for [ENSG00000263345.1]
WARNING, no entry stored in dbm for [ENSG00000269968.1]
WARNING, no entry stored in dbm for [ENSG00000236552.2]
WARNING, no entry stored in dbm for [ENSG00000269968.1]
WARNING, no entry stored in dbm for [ENSG00000268650.3]
WARNING, no entry stored in dbm for [ENSG00000264727.1]
WARNING, no entry stored in dbm for [ENSG00000274712.2]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000205578.6]
WARNING, no entry stored in dbm for [ENSG00000254610.3]
WARNING, no entry stored in dbm for [ENSG00000254610.3]
WARNING, no entry stored in dbm for [ENSG00000254610.3]
WARNING, no entry stored in dbm for [ENSG00000242759.8]
WARNING, no entry stored in dbm for [ENSG00000276771.1]
WARNING, no entry stored in dbm for [ENSG00000267344.1]
WARNING, no entry stored in dbm for [ENSG00000267698.1]
WARNING, no entry stored in dbm for [ENSG00000229465.1]
WARNING, no entry stored in dbm for [ENSG00000187984.13]
WARNING, no entry stored in dbm for [ENSG00000224928.2]
WARNING, no entry stored in dbm for [ENSG00000276397.2]
WARNING, no entry stored in dbm for [ENSG00000251595.7]
WARNING, no entry stored in dbm for [ENSG00000242908.6]


	* STAR-Fusion complete.  See output: /tmp/nxf.99uiQWnAdB/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)