-ctat genome lib [/tmp/nxf.AjHZqBHiKQ/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.AjHZqBHiKQ/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.AjHZqBHiKQ/./star-fusion.preliminary
-sample contains 295147149 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.AjHZqBHiKQ/ctat_genome_lib_build_dir  -J /tmp/nxf.AjHZqBHiKQ/BVT_FFPE_TRNA_stm_05_A23WKFTLT4_3.Chimeric.out.junction  -O /tmp/nxf.AjHZqBHiKQ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.AjHZqBHiKQ/BVT_FFPE_TRNA_stm_05_A23WKFTLT4_3.Chimeric.out.junction
-building interval tree based on /tmp/nxf.AjHZqBHiKQ/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

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[2760000], rate=46166.71/min -building interval tree based on /tmp/nxf.AjHZqBHiKQ/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.12 min).
-mapping reads to genes

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[2750000], rate=45180.72/min 
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[2770000], rate=45347.89/min -building interval tree based on /tmp/nxf.AjHZqBHiKQ/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

[10000], rate=85714.29/min 
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[2730000], rate=40484.43/min 
[2740000], rate=40562.55/min -building interval tree based on /tmp/nxf.AjHZqBHiKQ/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

[10000], rate=54545.45/min 
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[2740000], rate=36745.64/min 
[2750000], rate=36855.04/min 
[2760000], rate=36964.29/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.AjHZqBHiKQ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.AjHZqBHiKQ/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.AjHZqBHiKQ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.AjHZqBHiKQ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.AjHZqBHiKQ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 0.00 reads per min processed...  
 12000000.00 reads per min processed...  
 9000000.00 reads per min processed...  
 8000000.00 reads per min processed...  
 6000000.00 reads per min processed...  
 6000000.00 reads per min processed...  
 6000000.00 reads per min processed...  
 5333333.33 reads per min processed...  
 5400000.00 reads per min processed...  
 5454545.45 reads per min processed...  
 5500000.00 reads per min processed...  
 5538461.54 reads per min processed...  
 5200000.00 reads per min processed...  
 5250000.00 reads per min processed...  
 5294117.65 reads per min processed...  
 5333333.33 reads per min processed...  
 5100000.00 reads per min processed...  
 5142857.14 reads per min processed...  
 5181818.18 reads per min processed...  
 5217391.30 reads per min processed...  
 5250000.00 reads per min processed...  
 5076923.08 reads per min processed...  
 5111111.11 reads per min processed...  
 5142857.14 reads per min processed...  
 5000000.00 reads per min processed...  
 5032258.06 reads per min processed...  
 4909090.91 reads per min processed...  
 4941176.47 reads per min processed...  
 4833333.33 reads per min processed...  
 4864864.86 reads per min processed...  
 4894736.84 reads per min processed...  
 4923076.92 reads per min processed...  
 4829268.29 reads per min processed...  
 4857142.86 reads per min processed...  
 4883720.93 reads per min processed...  
 4909090.91 reads per min processed...  
 4826086.96 reads per min processed...  
 4851063.83 reads per min processed...  
 4875000.00 reads per min processed...  
 4897959.18 reads per min processed...  
 4920000.00 reads per min processed...  
 4941176.47 reads per min processed...  
 4867924.53 reads per min processed...  
 4888888.89 reads per min processed...  
 4909090.91 reads per min processed...  
 4842105.26 reads per min processed...  
 4862068.97 reads per min processed...  
 4881355.93 reads per min processed...  
 4900000.00 reads per min processed...  
 4918032.79 reads per min processed...  
 4857142.86 reads per min processed...  
 4875000.00 reads per min processed...  
 4892307.69 reads per min processed...  
 4909090.91 reads per min processed...  
 4925373.13 reads per min processed...  
 4941176.47 reads per min processed...  
 5029411.76 reads per min processed...  
 4971428.57 reads per min processed...  
 4985915.49 reads per min processed...  
 5000000.00 reads per min processed...  
 5013698.63 reads per min processed...  
 5027027.03 reads per min processed...  
 4973684.21 reads per min processed...  
 4987012.99 reads per min processed...  
 5000000.00 reads per min processed...  
 5012658.23 reads per min processed...  
 5025000.00 reads per min processed...  
 4975609.76 reads per min processed...  
 4987951.81 reads per min processed...  
 5000000.00 reads per min processed...  
 4953488.37 reads per min processed...  
 4965517.24 reads per min processed...  
 4977272.73 reads per min processed...  
 4988764.04 reads per min processed...  
 5000000.00 reads per min processed...  
 4956521.74 reads per min processed...  
 4967741.94 reads per min processed...  
 4978723.40 reads per min processed...  
 4937500.00 reads per min processed...  
 4948453.61 reads per min processed...  
 4959183.67 reads per min processed...  
 4969696.97 reads per min processed...  
 4980000.00 reads per min processed...  
 4941176.47 reads per min processed...  
 4951456.31 reads per min processed...  
 4961538.46 reads per min processed...  
 4971428.57 reads per min processed...  
 4934579.44 reads per min processed...  
 4944444.44 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.AjHZqBHiKQ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.AjHZqBHiKQ/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.AjHZqBHiKQ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.AjHZqBHiKQ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.AjHZqBHiKQ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.AjHZqBHiKQ/BVT_FFPE_TRNA_stm_05_A23WKFTLT4_3.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.AjHZqBHiKQ/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.AjHZqBHiKQ/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.AjHZqBHiKQ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -415890.683323
EM: Round [1] log likelihood: -415685.062261
EM: Round [2] log likelihood: -415611.366812
EM: Round [3] log likelihood: -415576.860870
EM: Round [4] log likelihood: -415558.583954
EM: Round [5] log likelihood: -415548.200040
EM: Round [6] log likelihood: -415541.963774
EM: Round [7] log likelihood: -415538.017767
EM: Round [8] log likelihood: -415535.393662
EM: Round [9] log likelihood: -415533.567606
EM: Round [10] log likelihood: -415532.245540
EM: Round [11] log likelihood: -415531.255780
EM: Round [12] log likelihood: -415530.493942
EM: Round [13] log likelihood: -415529.893985
EM: Round [14] log likelihood: -415529.412520
EM: Round [15] log likelihood: -415529.020038
EM: Round [16] log likelihood: -415528.695844
EM: Round [17] log likelihood: -415528.425024
EM: Round [18] log likelihood: -415528.196576
EM: Round [19] log likelihood: -415528.002217
EM: Round [20] log likelihood: -415527.835600
EM: Round [21] log likelihood: -415527.691787
EM: Round [22] log likelihood: -415527.566883
EM: Round [23] log likelihood: -415527.457784
EM: Round [24] log likelihood: -415527.361984
EM: Round [25] log likelihood: -415527.277446
EM: Round [26] log likelihood: -415527.202500
EM: Round [27] log likelihood: -415527.135765
EM: Round [28] log likelihood: -415527.076093
EM: Round [29] log likelihood: -415527.022524
EM: Round [30] log likelihood: -415526.974250
EM: Round [31] log likelihood: -415526.930589
EM: Round [32] log likelihood: -415526.890962
EM: Round [33] log likelihood: -415526.854874
EM: Round [34] log likelihood: -415526.821904
EM: Round [35] log likelihood: -415526.791687
EM: Round [36] log likelihood: -415526.763913
EM: Round [37] log likelihood: -415526.738309
EM: Round [38] log likelihood: -415526.714644
EM: Round [39] log likelihood: -415526.692711
EM: Round [40] log likelihood: -415526.672335
EM: Round [41] log likelihood: -415526.653359
EM: Round [42] log likelihood: -415526.635648
EM: Round [43] log likelihood: -415526.619082
EM: Round [44] log likelihood: -415526.603555
EM: Round [45] log likelihood: -415526.588974
EM: Round [46] log likelihood: -415526.575256
EM: Round [47] log likelihood: -415526.562329
EM: Round [48] log likelihood: -415526.550126
EM: Round [49] log likelihood: -415526.538591
EM: Round [50] log likelihood: -415526.527669
EM: Round [51] log likelihood: -415526.517315
EM: Round [52] log likelihood: -415526.507487
EM: Round [53] log likelihood: -415526.498147
EM: Round [54] log likelihood: -415526.489260
EM: Round [55] log likelihood: -415526.480796
EM: Round [56] log likelihood: -415526.472727
EM: Round [57] log likelihood: -415526.465026
EM: Round [58] log likelihood: -415526.457671
EM: Round [59] log likelihood: -415526.450641
EM: Round [60] log likelihood: -415526.443915
EM: Round [61] log likelihood: -415526.437477
EM: Round [62] log likelihood: -415526.431309
EM: Round [63] log likelihood: -415526.425397
EM: Round [64] log likelihood: -415526.419726
EM: Round [65] log likelihood: -415526.414284
EM: Round [66] log likelihood: -415526.409059
EM: Round [67] log likelihood: -415526.404039
EM: Round [68] log likelihood: -415526.399215
EM: Round [69] log likelihood: -415526.394576
EM: Round [70] log likelihood: -415526.390115
EM: Round [71] log likelihood: -415526.385821
EM: Round [72] log likelihood: -415526.381688
EM: Round [73] log likelihood: -415526.377709
EM: Round [74] log likelihood: -415526.373875
EM: Round [75] log likelihood: -415526.370182
EM: Round [76] log likelihood: -415526.366622
EM: Round [77] log likelihood: -415526.363190
EM: Round [78] log likelihood: -415526.359881
EM: Round [79] log likelihood: -415526.356689
EM: Round [80] log likelihood: -415526.353609
EM: Round [81] log likelihood: -415526.350638
EM: Round [82] log likelihood: -415526.347770
EM: Round [83] log likelihood: -415526.345002
EM: Round [84] log likelihood: -415526.342330
EM: Round [85] log likelihood: -415526.339749
EM: Round [86] log likelihood: -415526.337256
EM: Round [87] log likelihood: -415526.334849
EM: Round [88] log likelihood: -415526.332523
EM: Round [89] log likelihood: -415526.330276
EM: Round [90] log likelihood: -415526.328104
EM: Round [91] log likelihood: -415526.326006
EM: Round [92] log likelihood: -415526.323977
EM: Round [93] log likelihood: -415526.322017
EM: Round [94] log likelihood: -415526.320121
EM: Round [95] log likelihood: -415526.318289
EM: Round [96] log likelihood: -415526.316517
EM: Round [97] log likelihood: -415526.314803
EM: Round [98] log likelihood: -415526.313146
EM: Round [99] log likelihood: -415526.311544
EM: Round [100] log likelihood: -415526.309994
EM: Round [101] log likelihood: -415526.308494
EM: Round [102] log likelihood: -415526.307044
EM: Round [103] log likelihood: -415526.305641
EM: Round [104] log likelihood: -415526.304283
EM: Round [105] log likelihood: -415526.302970
EM: Round [106] log likelihood: -415526.301699
EM: Round [107] log likelihood: -415526.300470
EM: Round [108] log likelihood: -415526.299280
EM: Round [109] log likelihood: -415526.298128
EM: Round [110] log likelihood: -415526.297014
EM: Round [111] log likelihood: -415526.295936
EM: Round [112] log likelihood: -415526.294892
EM: Round [113] log likelihood: -415526.293882
EM: Round [114] log likelihood: -415526.292904
EM: Round [115] log likelihood: -415526.291958
EM: Round [116] log likelihood: -415526.291041
EM: Round [117] log likelihood: -415526.290155
EM: Round [118] log likelihood: -415526.289296
EM: Round [119] log likelihood: -415526.288465
EM: Round [120] log likelihood: -415526.287661
EM: Round [121] log likelihood: -415526.286882
EM: Round [122] log likelihood: -415526.286128
EM: Round [123] log likelihood: -415526.285398
EM: Round [124] log likelihood: -415526.284691
EM: Round [125] log likelihood: -415526.284007
EM: Round [126] log likelihood: -415526.283345
EM: Round [127] log likelihood: -415526.282703
EM: Round [128] log likelihood: -415526.282082
EM: Round [129] log likelihood: -415526.281481
EM: Round [130] log likelihood: -415526.280899
EM: Round [131] log likelihood: -415526.280335
EM: Round [132] log likelihood: -415526.279789
EM: Round [133] log likelihood: -415526.279260
EM: Round [134] log likelihood: -415526.278748
EM: Round [135] log likelihood: -415526.278252
EM: Round [136] log likelihood: -415526.277772
EM: Round [137] log likelihood: -415526.277308
EM: Round [138] log likelihood: -415526.276857
EM: Round [139] log likelihood: -415526.276422
EM: Round [140] log likelihood: -415526.275999
EM: Round [141] log likelihood: -415526.275591
EM: Round [142] log likelihood: -415526.275195
EM: Round [143] log likelihood: -415526.274811
EM: Round [144] log likelihood: -415526.274440
EM: Round [145] log likelihood: -415526.274080
EM: Round [146] log likelihood: -415526.273732
EM: Round [147] log likelihood: -415526.273395
EM: Round [148] log likelihood: -415526.273068
EM: Round [149] log likelihood: -415526.272752
EM: Round [150] log likelihood: -415526.272445
EM: Round [151] log likelihood: -415526.272149
EM: Round [152] log likelihood: -415526.271861
EM: Round [153] log likelihood: -415526.271583
EM: Round [154] log likelihood: -415526.271313
EM: Round [155] log likelihood: -415526.271052
EM: Round [156] log likelihood: -415526.270799
EM: Round [157] log likelihood: -415526.270555
EM: Round [158] log likelihood: -415526.270317
EM: Round [159] log likelihood: -415526.270088
EM: Round [160] log likelihood: -415526.269865
EM: Round [161] log likelihood: -415526.269650
EM: Round [162] log likelihood: -415526.269441
EM: Round [163] log likelihood: -415526.269239
EM: Round [164] log likelihood: -415526.269043
EM: Round [165] log likelihood: -415526.268853
EM: Round [166] log likelihood: -415526.268670
EM: Round [167] log likelihood: -415526.268492
EM: Round [168] log likelihood: -415526.268319
EM: Round [169] log likelihood: -415526.268152
EM: Round [170] log likelihood: -415526.267991
EM: Round [171] log likelihood: -415526.267834
EM: Round [172] log likelihood: -415526.267682
EM: Round [173] log likelihood: -415526.267536
EM: Round [174] log likelihood: -415526.267393
EM: Round [175] log likelihood: -415526.267255
EM: Round [176] log likelihood: -415526.267122
EM: Round [177] log likelihood: -415526.266993
EM: Round [178] log likelihood: -415526.266867
EM: Round [179] log likelihood: -415526.266746
EM: Round [180] log likelihood: -415526.266629
EM: Round [181] log likelihood: -415526.266515
EM: Round [182] log likelihood: -415526.266405
EM: Round [183] log likelihood: -415526.266298
EM: Round [184] log likelihood: -415526.266194
EM: Round [185] log likelihood: -415526.266094
EM: Round [186] log likelihood: -415526.265997
EM: Stopping iterations at round 186 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -413962.720635
EM: Round [1] log likelihood: -413798.485244
EM: Round [2] log likelihood: -413740.911851
EM: Round [3] log likelihood: -413714.431197
EM: Round [4] log likelihood: -413700.620555
EM: Round [5] log likelihood: -413692.876147
EM: Round [6] log likelihood: -413688.273274
EM: Round [7] log likelihood: -413685.386538
EM: Round [8] log likelihood: -413683.484099
EM: Round [9] log likelihood: -413682.174008
EM: Round [10] log likelihood: -413681.237258
EM: Round [11] log likelihood: -413680.546053
EM: Round [12] log likelihood: -413680.022559
EM: Round [13] log likelihood: -413679.617410
EM: Round [14] log likelihood: -413679.298119
EM: Round [15] log likelihood: -413679.042588
EM: Round [16] log likelihood: -413678.835351
EM: Round [17] log likelihood: -413678.665318
EM: Round [18] log likelihood: -413678.524366
EM: Round [19] log likelihood: -413678.406442
EM: Round [20] log likelihood: -413678.306961
EM: Round [21] log likelihood: -413678.222406
EM: Round [22] log likelihood: -413678.150044
EM: Round [23] log likelihood: -413678.087729
EM: Round [24] log likelihood: -413678.033761
EM: Round [25] log likelihood: -413677.986776
EM: Round [26] log likelihood: -413677.945674
EM: Round [27] log likelihood: -413677.909562
EM: Round [28] log likelihood: -413677.877704
EM: Round [29] log likelihood: -413677.849495
EM: Round [30] log likelihood: -413677.824431
EM: Round [31] log likelihood: -413677.802091
EM: Round [32] log likelihood: -413677.782120
EM: Round [33] log likelihood: -413677.764218
EM: Round [34] log likelihood: -413677.748132
EM: Round [35] log likelihood: -413677.733642
EM: Round [36] log likelihood: -413677.720562
EM: Round [37] log likelihood: -413677.708732
EM: Round [38] log likelihood: -413677.698011
EM: Round [39] log likelihood: -413677.688278
EM: Round [40] log likelihood: -413677.679428
EM: Round [41] log likelihood: -413677.671369
EM: Round [42] log likelihood: -413677.664019
EM: Round [43] log likelihood: -413677.657307
EM: Round [44] log likelihood: -413677.651169
EM: Round [45] log likelihood: -413677.645551
EM: Round [46] log likelihood: -413677.640401
EM: Round [47] log likelihood: -413677.635677
EM: Round [48] log likelihood: -413677.631338
EM: Round [49] log likelihood: -413677.627349
EM: Round [50] log likelihood: -413677.623679
EM: Round [51] log likelihood: -413677.620300
EM: Round [52] log likelihood: -413677.617185
EM: Round [53] log likelihood: -413677.614312
EM: Round [54] log likelihood: -413677.611660
EM: Round [55] log likelihood: -413677.609210
EM: Round [56] log likelihood: -413677.606946
EM: Round [57] log likelihood: -413677.604852
EM: Round [58] log likelihood: -413677.602913
EM: Round [59] log likelihood: -413677.601117
EM: Round [60] log likelihood: -413677.599454
EM: Round [61] log likelihood: -413677.597911
EM: Round [62] log likelihood: -413677.596479
EM: Round [63] log likelihood: -413677.595150
EM: Round [64] log likelihood: -413677.593916
EM: Round [65] log likelihood: -413677.592769
EM: Round [66] log likelihood: -413677.591703
EM: Round [67] log likelihood: -413677.590711
EM: Round [68] log likelihood: -413677.589787
EM: Round [69] log likelihood: -413677.588927
EM: Round [70] log likelihood: -413677.588126
EM: Round [71] log likelihood: -413677.587379
EM: Round [72] log likelihood: -413677.586683
EM: Round [73] log likelihood: -413677.586033
EM: Round [74] log likelihood: -413677.585427
EM: Round [75] log likelihood: -413677.584861
EM: Round [76] log likelihood: -413677.584331
EM: Round [77] log likelihood: -413677.583837
EM: Round [78] log likelihood: -413677.583374
EM: Round [79] log likelihood: -413677.582942
EM: Round [80] log likelihood: -413677.582537
EM: Round [81] log likelihood: -413677.582157
EM: Round [82] log likelihood: -413677.581802
EM: Round [83] log likelihood: -413677.581469
EM: Round [84] log likelihood: -413677.581157
EM: Round [85] log likelihood: -413677.580864
EM: Round [86] log likelihood: -413677.580590
EM: Round [87] log likelihood: -413677.580332
EM: Round [88] log likelihood: -413677.580089
EM: Round [89] log likelihood: -413677.579862
EM: Round [90] log likelihood: -413677.579648
EM: Round [91] log likelihood: -413677.579446
EM: Round [92] log likelihood: -413677.579257
EM: Round [93] log likelihood: -413677.579079
EM: Round [94] log likelihood: -413677.578911
EM: Round [95] log likelihood: -413677.578753
EM: Round [96] log likelihood: -413677.578604
EM: Round [97] log likelihood: -413677.578464
EM: Round [98] log likelihood: -413677.578332
EM: Round [99] log likelihood: -413677.578207
EM: Round [100] log likelihood: -413677.578089
EM: Round [101] log likelihood: -413677.577978
EM: Round [102] log likelihood: -413677.577872
EM: Round [103] log likelihood: -413677.577773
EM: Stopping iterations at round 103 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.AjHZqBHiKQ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.AjHZqBHiKQ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.AjHZqBHiKQ/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.AjHZqBHiKQ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.AjHZqBHiKQ/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.AjHZqBHiKQ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.AjHZqBHiKQ/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.AjHZqBHiKQ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.AjHZqBHiKQ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.AjHZqBHiKQ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.AjHZqBHiKQ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.AjHZqBHiKQ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.AjHZqBHiKQ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.AjHZqBHiKQ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 295147149 > /tmp/nxf.AjHZqBHiKQ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.AjHZqBHiKQ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.AjHZqBHiKQ/ctat_genome_lib_build_dir > /tmp/nxf.AjHZqBHiKQ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.AjHZqBHiKQ/ctat_genome_lib_build_dir --annotate /tmp/nxf.AjHZqBHiKQ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.AjHZqBHiKQ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.AjHZqBHiKQ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.AjHZqBHiKQ/ctat_genome_lib_build_dir
-done, see /tmp/nxf.AjHZqBHiKQ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.AjHZqBHiKQ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.AjHZqBHiKQ/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 2164, filtered: 13725)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.AjHZqBHiKQ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.AjHZqBHiKQ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.AjHZqBHiKQ/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [IGH-.g@-ext]
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WARNING, no entry stored in dbm for [ENSG00000280402.1]
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WARNING, no entry stored in dbm for [ENSG00000172250.16]
WARNING, no entry stored in dbm for [ENSG00000255949.1]
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WARNING, no entry stored in dbm for [ENSG00000222041.11]
WARNING, no entry stored in dbm for [ENSG00000284428.1]
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WARNING, no entry stored in dbm for [ENSG00000213293.4]
WARNING, no entry stored in dbm for [ENSG00000250127.1]
WARNING, no entry stored in dbm for [ENSG00000248391.6]
WARNING, no entry stored in dbm for [ENSG00000230215.1]
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WARNING, no entry stored in dbm for [ENSG00000267014.6]
WARNING, no entry stored in dbm for [ENSG00000255171.7]
WARNING, no entry stored in dbm for [ENSG00000225564.6]
WARNING, no entry stored in dbm for [ENSG00000227964.1]
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WARNING, no entry stored in dbm for [ENSG00000215866.8]
WARNING, no entry stored in dbm for [ENSG00000223823.1]
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WARNING, no entry stored in dbm for [ENSG00000281721.1]
WARNING, no entry stored in dbm for [ENSG00000228393.4]
WARNING, no entry stored in dbm for [ENSG00000242516.2]
WARNING, no entry stored in dbm for [ENSG00000203930.12]
WARNING, no entry stored in dbm for [ENSG00000226067.7]
WARNING, no entry stored in dbm for [ENSG00000233559.2]
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WARNING, no entry stored in dbm for [ENSG00000239899.3]
WARNING, no entry stored in dbm for [ENSG00000244642.3]
WARNING, no entry stored in dbm for [ENSG00000224286.6]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000214930.2]
WARNING, no entry stored in dbm for [ENSG00000248971.2]
WARNING, no entry stored in dbm for [ENSG00000188242.4]
WARNING, no entry stored in dbm for [ENSG00000258536.1]
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WARNING, no entry stored in dbm for [ENSG00000229404.6]
WARNING, no entry stored in dbm for [ENSG00000236467.8]
WARNING, no entry stored in dbm for [ENSG00000229203.1]
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WARNING, no entry stored in dbm for [ENSG00000250980.1]
WARNING, no entry stored in dbm for [ENSG00000254670.1]
WARNING, no entry stored in dbm for [ENSG00000235595.1]
WARNING, no entry stored in dbm for [ENSG00000236340.6]
WARNING, no entry stored in dbm for [ENSG00000227733.10]
WARNING, no entry stored in dbm for [ENSG00000227733.10]
WARNING, no entry stored in dbm for [ENSG00000230979.3]
WARNING, no entry stored in dbm for [ENSG00000251557.2]
WARNING, no entry stored in dbm for [ENSG00000280515.1]
WARNING, no entry stored in dbm for [ENSG00000215492.6]
WARNING, no entry stored in dbm for [ENSG00000226188.2]
WARNING, no entry stored in dbm for [ENSG00000214223.4]
WARNING, no entry stored in dbm for [ENSG00000181984.11]
WARNING, no entry stored in dbm for [ENSG00000286694.1]
WARNING, no entry stored in dbm for [ENSG00000271044.1]
WARNING, no entry stored in dbm for [ENSG00000237931.1]
WARNING, no entry stored in dbm for [ENSG00000249149.2]
WARNING, no entry stored in dbm for [ENSG00000206341.7]
WARNING, no entry stored in dbm for [ENSG00000260731.1]
WARNING, no entry stored in dbm for [ENSG00000168405.17]
WARNING, no entry stored in dbm for [ENSG00000270938.1]
WARNING, no entry stored in dbm for [ENSG00000226259.10]
WARNING, no entry stored in dbm for [ENSG00000227036.8]
WARNING, no entry stored in dbm for [ENSG00000235410.1]
WARNING, no entry stored in dbm for [ENSG00000235314.1]
WARNING, no entry stored in dbm for [ENSG00000249375.8]
WARNING, no entry stored in dbm for [ENSG00000250903.9]
WARNING, no entry stored in dbm for [ENSG00000224078.15]
WARNING, no entry stored in dbm for [ENSG00000228206.2]
WARNING, no entry stored in dbm for [ENSG00000232520.2]
WARNING, no entry stored in dbm for [ENSG00000278434.1]
WARNING, no entry stored in dbm for [ENSG00000275734.2]
WARNING, no entry stored in dbm for [ENSG00000266010.2]
WARNING, no entry stored in dbm for [ENSG00000238002.3]
WARNING, no entry stored in dbm for [ENSG00000270055.1]
WARNING, no entry stored in dbm for [ENSG00000255471.1]
WARNING, no entry stored in dbm for [ENSG00000250208.6]
WARNING, no entry stored in dbm for [ENSG00000231646.6]
WARNING, no entry stored in dbm for [ENSG00000214176.9]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000275340.1]
WARNING, no entry stored in dbm for [ENSG00000232149.1]
WARNING, no entry stored in dbm for [ENSG00000235768.1]
WARNING, no entry stored in dbm for [ENSG00000232293.2]
WARNING, no entry stored in dbm for [ENSG00000250251.6]
WARNING, no entry stored in dbm for [ENSG00000255052.5]
WARNING, no entry stored in dbm for [ENSG00000254016.3]
WARNING, no entry stored in dbm for [ENSG00000244383.2]
WARNING, no entry stored in dbm for [ENSG00000231841.1]
WARNING, no entry stored in dbm for [ENSG00000283597.3]
WARNING, no entry stored in dbm for [ENSG00000226608.3]
WARNING, no entry stored in dbm for [ENSG00000279344.1]
WARNING, no entry stored in dbm for [ENSG00000265514.2]
WARNING, no entry stored in dbm for [ENSG00000225470.8]
WARNING, no entry stored in dbm for [ENSG00000212743.2]
WARNING, no entry stored in dbm for [ENSG00000204623.9]
WARNING, no entry stored in dbm for [ENSG00000199672.1]
WARNING, no entry stored in dbm for [ENSG00000175749.11]
WARNING, no entry stored in dbm for [ENSG00000238105.7]
WARNING, no entry stored in dbm for [ENSG00000243859.3]
WARNING, no entry stored in dbm for [ENSG00000243701.7]
WARNING, no entry stored in dbm for [ENSG00000248079.3]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000254423.1]
WARNING, no entry stored in dbm for [ENSG00000275830.2]
WARNING, no entry stored in dbm for [ENSG00000225116.1]
WARNING, no entry stored in dbm for [ENSG00000263724.2]
WARNING, no entry stored in dbm for [ENSG00000263724.2]
WARNING, no entry stored in dbm for [ENSG00000259631.1]
WARNING, no entry stored in dbm for [ENSG00000275787.1]
WARNING, no entry stored in dbm for [ENSG00000244089.1]
WARNING, no entry stored in dbm for [ENSG00000231890.8]
WARNING, no entry stored in dbm for [ENSG00000204352.4]
WARNING, no entry stored in dbm for [ENSG00000276077.4]
WARNING, no entry stored in dbm for [ENSG00000230630.5]
WARNING, no entry stored in dbm for [ENSG00000233025.1]
WARNING, no entry stored in dbm for [ENSG00000100058.12]
WARNING, no entry stored in dbm for [ENSG00000285690.1]
WARNING, no entry stored in dbm for [ENSG00000285633.1]
WARNING, no entry stored in dbm for [ENSG00000244251.1]
WARNING, no entry stored in dbm for [ENSG00000288032.1]
WARNING, no entry stored in dbm for [ENSG00000283541.1]
WARNING, no entry stored in dbm for [ENSG00000260896.6]
WARNING, no entry stored in dbm for [ENSG00000282059.1]
WARNING, no entry stored in dbm for [ENSG00000260923.7]
WARNING, no entry stored in dbm for [ENSG00000281490.1]
WARNING, no entry stored in dbm for [ENSG00000227660.1]
WARNING, no entry stored in dbm for [ENSG00000249238.1]
WARNING, no entry stored in dbm for [ENSG00000243389.1]
WARNING, no entry stored in dbm for [ENSG00000226312.7]
WARNING, no entry stored in dbm for [ENSG00000196796.5]
WARNING, no entry stored in dbm for [ENSG00000226620.8]
WARNING, no entry stored in dbm for [ENSG00000250406.2]
WARNING, no entry stored in dbm for [ENSG00000227742.2]
WARNING, no entry stored in dbm for [ENSG00000223745.8]
WARNING, no entry stored in dbm for [ENSG00000203799.13]
WARNING, no entry stored in dbm for [ENSG00000233098.9]
WARNING, no entry stored in dbm for [ENSG00000226969.1]
WARNING, no entry stored in dbm for [ENSG00000272168.8]
WARNING, no entry stored in dbm for [ENSG00000272168.8]
WARNING, no entry stored in dbm for [ENSG00000287122.1]
WARNING, no entry stored in dbm for [ENSG00000285929.1]
WARNING, no entry stored in dbm for [ENSG00000228775.8]
WARNING, no entry stored in dbm for [ENSG00000216636.1]
WARNING, no entry stored in dbm for [ENSG00000204352.4]
WARNING, no entry stored in dbm for [ENSG00000222047.9]
WARNING, no entry stored in dbm for [ENSG00000285417.1]
WARNING, no entry stored in dbm for [ENSG00000273297.2]
WARNING, no entry stored in dbm for [ENSG00000270025.2]
WARNING, no entry stored in dbm for [ENSG00000243289.1]
WARNING, no entry stored in dbm for [ENSG00000258780.1]
WARNING, no entry stored in dbm for [ENSG00000234488.1]
WARNING, no entry stored in dbm for [ENSG00000249375.8]
WARNING, no entry stored in dbm for [ENSG00000223546.7]
WARNING, no entry stored in dbm for [ENSG00000277544.1]
WARNING, no entry stored in dbm for [ENSG00000235885.8]
WARNING, no entry stored in dbm for [ENSG00000251548.1]
WARNING, no entry stored in dbm for [ENSG00000266918.1]
WARNING, no entry stored in dbm for [ENSG00000244198.7]
WARNING, no entry stored in dbm for [ENSG00000287243.2]
WARNING, no entry stored in dbm for [ENSG00000230630.5]
WARNING, no entry stored in dbm for [ENSG00000177410.13]
WARNING, no entry stored in dbm for [ENSG00000185390.2]
WARNING, no entry stored in dbm for [ENSG00000198763.3]
WARNING, no entry stored in dbm for [ENSG00000254568.1]
WARNING, no entry stored in dbm for [ENSG00000254568.1]
WARNING, no entry stored in dbm for [ENSG00000254590.1]
WARNING, no entry stored in dbm for [ENSG00000287934.1]
WARNING, no entry stored in dbm for [ENSG00000236304.1]
WARNING, no entry stored in dbm for [ENSG00000279209.1]
WARNING, no entry stored in dbm for [ENSG00000266931.2]
WARNING, no entry stored in dbm for [ENSG00000262943.7]
WARNING, no entry stored in dbm for [ENSG00000250268.3]
WARNING, no entry stored in dbm for [ENSG00000256101.5]
WARNING, no entry stored in dbm for [ENSG00000234712.1]
WARNING, no entry stored in dbm for [ENSG00000270094.1]
WARNING, no entry stored in dbm for [ENSG00000241860.7]
WARNING, no entry stored in dbm for [ENSG00000286174.1]
WARNING, no entry stored in dbm for [ENSG00000284645.1]
WARNING, no entry stored in dbm for [ENSG00000270780.1]
WARNING, no entry stored in dbm for [ENSG00000234589.4]
WARNING, no entry stored in dbm for [ENSG00000272161.1]
WARNING, no entry stored in dbm for [ENSG00000283480.1]
WARNING, no entry stored in dbm for [ENSG00000227959.1]
WARNING, no entry stored in dbm for [ENSG00000228838.1]
WARNING, no entry stored in dbm for [ENSG00000237480.3]
WARNING, no entry stored in dbm for [ENSG00000273507.5]
WARNING, no entry stored in dbm for [ENSG00000260412.1]
WARNING, no entry stored in dbm for [ENSG00000231563.2]
WARNING, no entry stored in dbm for [ENSG00000258377.1]
WARNING, no entry stored in dbm for [ENSG00000237596.7]
WARNING, no entry stored in dbm for [ENSG00000283773.1]
WARNING, no entry stored in dbm for [ENSG00000225644.1]
WARNING, no entry stored in dbm for [ENSG00000241499.1]
WARNING, no entry stored in dbm for [ENSG00000244398.1]
WARNING, no entry stored in dbm for [ENSG00000268858.2]
WARNING, no entry stored in dbm for [ENSG00000226812.2]
WARNING, no entry stored in dbm for [ENSG00000286052.1]
WARNING, no entry stored in dbm for [ENSG00000232528.3]
WARNING, no entry stored in dbm for [ENSG00000259111.1]
WARNING, no entry stored in dbm for [ENSG00000286240.1]
WARNING, no entry stored in dbm for [ENSG00000228697.4]
WARNING, no entry stored in dbm for [ENSG00000282740.1]
WARNING, no entry stored in dbm for [ENSG00000287619.1]
WARNING, no entry stored in dbm for [ENSG00000215022.7]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000196893.3]
WARNING, no entry stored in dbm for [ENSG00000269900.3]
WARNING, no entry stored in dbm for [ENSG00000231234.2]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000244314.3]
WARNING, no entry stored in dbm for [ENSG00000287979.1]
WARNING, no entry stored in dbm for [ENSG00000235081.1]
WARNING, no entry stored in dbm for [ENSG00000235081.1]
WARNING, no entry stored in dbm for [ENSG00000223804.5]
WARNING, no entry stored in dbm for [ENSG00000223779.6]
WARNING, no entry stored in dbm for [ENSG00000279047.4]
WARNING, no entry stored in dbm for [ENSG00000266903.2]
WARNING, no entry stored in dbm for [ENSG00000268034.1]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000274423.1]
WARNING, no entry stored in dbm for [ENSG00000277702.1]
WARNING, no entry stored in dbm for [ENSG00000277702.1]
WARNING, no entry stored in dbm for [ENSG00000249942.1]
WARNING, no entry stored in dbm for [ENSG00000282572.2]
WARNING, no entry stored in dbm for [ENSG00000241860.7]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000260126.2]
WARNING, no entry stored in dbm for [ENSG00000244257.5]
WARNING, no entry stored in dbm for [ENSG00000198555.7]
WARNING, no entry stored in dbm for [ENSG00000260261.2]
WARNING, no entry stored in dbm for [ENSG00000214135.8]
WARNING, no entry stored in dbm for [ENSG00000280117.1]
WARNING, no entry stored in dbm for [ENSG00000280117.1]
WARNING, no entry stored in dbm for [ENSG00000244398.1]
WARNING, no entry stored in dbm for [ENSG00000249541.1]
WARNING, no entry stored in dbm for [ENSG00000249492.2]
WARNING, no entry stored in dbm for [ENSG00000124097.7]
WARNING, no entry stored in dbm for [ENSG00000250378.4]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000205959.4]
WARNING, no entry stored in dbm for [ENSG00000260776.6]
WARNING, no entry stored in dbm for [ENSG00000239920.2]
WARNING, no entry stored in dbm for [ENSG00000254035.1]
WARNING, no entry stored in dbm for [ENSG00000266014.2]
WARNING, no entry stored in dbm for [ENSG00000272763.1]
WARNING, no entry stored in dbm for [ENSG00000279693.1]
WARNING, no entry stored in dbm for [ENSG00000213433.5]
WARNING, no entry stored in dbm for [ENSG00000271943.2]
WARNING, no entry stored in dbm for [ENSG00000284648.1]
WARNING, no entry stored in dbm for [ENSG00000284610.1]
WARNING, no entry stored in dbm for [ENSG00000251378.1]
WARNING, no entry stored in dbm for [ENSG00000224819.2]
WARNING, no entry stored in dbm for [ENSG00000265401.1]
WARNING, no entry stored in dbm for [ENSG00000173209.23]
WARNING, no entry stored in dbm for [ENSG00000268362.6]
WARNING, no entry stored in dbm for [ENSG00000268362.6]
WARNING, no entry stored in dbm for [ENSG00000261471.1]
WARNING, no entry stored in dbm for [ENSG00000285035.1]
WARNING, no entry stored in dbm for [ENSG00000264151.6]
WARNING, no entry stored in dbm for [ENSG00000261848.5]
WARNING, no entry stored in dbm for [ENSG00000254409.3]
WARNING, no entry stored in dbm for [ENSG00000244953.1]
WARNING, no entry stored in dbm for [ENSG00000216285.5]
WARNING, no entry stored in dbm for [ENSG00000286504.1]
WARNING, no entry stored in dbm for [ENSG00000216285.5]
WARNING, no entry stored in dbm for [ENSG00000283674.3]
WARNING, no entry stored in dbm for [ENSG00000216285.5]
WARNING, no entry stored in dbm for [ENSG00000268416.1]
WARNING, no entry stored in dbm for [ENSG00000287388.1]
WARNING, no entry stored in dbm for [ENSG00000287388.1]
WARNING, no entry stored in dbm for [ENSG00000228801.6]
WARNING, no entry stored in dbm for [ENSG00000255858.3]
WARNING, no entry stored in dbm for [ENSG00000287469.1]
WARNING, no entry stored in dbm for [ENSG00000248223.1]
WARNING, no entry stored in dbm for [ENSG00000257817.2]
WARNING, no entry stored in dbm for [ENSG00000188002.10]
WARNING, no entry stored in dbm for [ENSG00000254485.5]
WARNING, no entry stored in dbm for [ENSG00000286909.1]
WARNING, no entry stored in dbm for [ENSG00000185485.14]
WARNING, no entry stored in dbm for [ENSG00000285600.1]
WARNING, no entry stored in dbm for [ENSG00000287555.1]
WARNING, no entry stored in dbm for [ENSG00000248538.8]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000242338.6]
WARNING, no entry stored in dbm for [ENSG00000272800.3]
WARNING, no entry stored in dbm for [ENSG00000268047.1]
WARNING, no entry stored in dbm for [ENSG00000266573.6]
WARNING, no entry stored in dbm for [ENSG00000287306.1]
WARNING, no entry stored in dbm for [ENSG00000223947.1]
WARNING, no entry stored in dbm for [ENSG00000286122.1]
WARNING, no entry stored in dbm for [ENSG00000279829.1]
WARNING, no entry stored in dbm for [ENSG00000232814.2]
WARNING, no entry stored in dbm for [ENSG00000265542.5]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000225057.2]
WARNING, no entry stored in dbm for [ENSG00000228897.1]
WARNING, no entry stored in dbm for [ENSG00000269289.6]
WARNING, no entry stored in dbm for [ENSG00000237161.4]
WARNING, no entry stored in dbm for [ENSG00000286068.1]
WARNING, no entry stored in dbm for [ENSG00000272702.1]
WARNING, no entry stored in dbm for [ENSG00000269439.6]
WARNING, no entry stored in dbm for [ENSG00000280283.1]
WARNING, no entry stored in dbm for [ENSG00000268416.1]
WARNING, no entry stored in dbm for [ENSG00000235253.1]
WARNING, no entry stored in dbm for [ENSG00000229738.1]
WARNING, no entry stored in dbm for [ENSG00000235726.7]
WARNING, no entry stored in dbm for [ENSG00000256377.6]
WARNING, no entry stored in dbm for [ENSG00000284242.1]
WARNING, no entry stored in dbm for [ENSG00000238045.9]
WARNING, no entry stored in dbm for [ENSG00000260788.6]
WARNING, no entry stored in dbm for [ENSG00000260905.1]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000249637.2]
WARNING, no entry stored in dbm for [ENSG00000273015.2]
WARNING, no entry stored in dbm for [ENSG00000259124.1]
WARNING, no entry stored in dbm for [ENSG00000273729.1]
WARNING, no entry stored in dbm for [ENSG00000278909.1]
WARNING, no entry stored in dbm for [ENSG00000244055.2]
WARNING, no entry stored in dbm for [ENSG00000277458.1]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000277458.1]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000269145.2]
WARNING, no entry stored in dbm for [ENSG00000213542.3]
WARNING, no entry stored in dbm for [ENSG00000267575.7]
WARNING, no entry stored in dbm for [ENSG00000283132.1]
WARNING, no entry stored in dbm for [ENSG00000275665.1]
WARNING, no entry stored in dbm for [ENSG00000236531.2]
WARNING, no entry stored in dbm for [ENSG00000267623.3]
WARNING, no entry stored in dbm for [ENSG00000274712.2]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000254610.3]
WARNING, no entry stored in dbm for [ENSG00000225705.2]
WARNING, no entry stored in dbm for [ENSG00000240399.1]
WARNING, no entry stored in dbm for [ENSG00000239559.2]
WARNING, no entry stored in dbm for [ENSG00000267394.1]
WARNING, no entry stored in dbm for [ENSG00000268266.1]
WARNING, no entry stored in dbm for [ENSG00000261018.1]
WARNING, no entry stored in dbm for [ENSG00000286733.1]


	* STAR-Fusion complete.  See output: /tmp/nxf.AjHZqBHiKQ/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)