File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/35/4ca36d2b2330342c1f687b2e24a322/.command.log
Size
1.2 KB
Task
NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:VCF_COLLECT (BVT_FFPE_TRNA_brn_01_A23WKFTLT4_1)
Attempt

Content

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  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a5/8792c6f76125bb90af398990f5d144/BVT_FFPE_TRNA_brn_01_A23WKFTLT4_1.FusionInspector.fusions.abridged.tsv.annotated.coding_effect
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/35/4ca36d2b2330342c1f687b2e24a322/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1b/2a283d2dd2b6f40d3d9c1b23d10e72/BVT_FFPE_TRNA_brn_01_A23WKFTLT4_1.arriba.fusions.filtered_pass_only.tsv
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/hgnc/hgnc_complete_set.txt
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/hgnc/HGNC-DB-timestamp.txt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fc/26533f422521c2b4cc01d105fad534/BVT_FFPE_TRNA_brn_01_A23WKFTLT4_1.fusions.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/35/4ca36d2b2330342c1f687b2e24a322/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fc/26533f422521c2b4cc01d105fad534/BVT_FFPE_TRNA_brn_01_A23WKFTLT4_1_fusionreport_index.html
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3b/68f664ab905ee8616f2d0fa0e083f5/BVT_FFPE_TRNA_brn_01_A23WKFTLT4_1.tsv
==> STAGING COMPLETE (9 inputs)