File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4e/37416b96b3bf2e9655195b459cd83e/.command.err
Size
557 bytes
Task
NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (BVT_FFPE_TRNA_bld_02_A23WKFTLT4_2)
Attempt

Content

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Processing Kallisto file: BVT_FFPE_TRNA_bld_02_A23WKFTLT4_2/abundance.h5
Successfully converted BVT_FFPE_TRNA_bld_02_A23WKFTLT4_2/abundance.h5 to BVT_FFPE_TRNA_bld_02_A23WKFTLT4_2_kallisto_mqc.tsv
  Sample: BVT_FFPE_TRNA_bld_02_A23WKFTLT4_2
  Mean Fragment Length: 128.6 bp
  Median Fragment Length: 121.0 bp
  pct_mito_est_counts: 0.012%
  pct_ribo_est_counts: 1.888%
  pct_hk_est_counts: 0.62%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.021%
  pct_ribo_tpm: 4.977%
  pct_hk_tpm: 0.869%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 6.247%