Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/45/442376567a6c1c55ce5dbae83bb6e6/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b2/a0b0f6f8f102fb0b6c53bbfa5b44a4/BVT_FFPE_TRNA_bst_01_01_A23WKFTLT4_2_1.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b2/a0b0f6f8f102fb0b6c53bbfa5b44a4/BVT_FFPE_TRNA_bst_01_01_A23WKFTLT4_2_2.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/64/17ffbb45bc9682121479433501ae8c/BVT_FFPE_TRNA_bst_01_01_A23WKFTLT4_2.Chimeric.out.junction
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/45/442376567a6c1c55ce5dbae83bb6e6/.command.run
==> STAGING COMPLETE (6 inputs)

-ctat genome lib [/tmp/nxf.CALE5DUpPL/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.CALE5DUpPL/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.CALE5DUpPL/./star-fusion.preliminary
-sample contains 202558469 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.CALE5DUpPL/ctat_genome_lib_build_dir  -J /tmp/nxf.CALE5DUpPL/BVT_FFPE_TRNA_bst_01_01_A23WKFTLT4_2.Chimeric.out.junction  -O /tmp/nxf.CALE5DUpPL/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.CALE5DUpPL/BVT_FFPE_TRNA_bst_01_01_A23WKFTLT4_2.Chimeric.out.junction
-building interval tree based on /tmp/nxf.CALE5DUpPL/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

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[2150000], rate=50727.49/min -building interval tree based on /tmp/nxf.CALE5DUpPL/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

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[2150000], rate=41030.53/min -building interval tree based on /tmp/nxf.CALE5DUpPL/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

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[1800000], rate=38890.89/min 
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[2000000], rate=40133.78/min 
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[2050000], rate=40647.72/min 
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[2110000], rate=40292.81/min 
[2120000], rate=40189.57/min 
[2130000], rate=40112.99/min 
[2140000], rate=40037.42/min -building interval tree based on /tmp/nxf.CALE5DUpPL/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

[10000], rate=120000.00/min 
[20000], rate=109090.91/min 
[30000], rate=128571.43/min 
[40000], rate=150000.00/min 
[50000], rate=150000.00/min 
[60000], rate=150000.00/min 
[70000], rate=140000.00/min 
[80000], rate=133333.33/min 
[90000], rate=145945.95/min 
[100000], rate=142857.14/min 
[110000], rate=153488.37/min 
[120000], rate=141176.47/min 
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[140000], rate=137704.92/min 
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[200000], rate=146341.46/min 
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[1740000], rate=29342.33/min 
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[1820000], rate=29268.29/min 
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[2000000], rate=29239.77/min 
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[2040000], rate=29515.31/min 
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[2120000], rate=30192.26/min 
[2130000], rate=30298.72/min 
[2140000], rate=30390.53/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.CALE5DUpPL/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.CALE5DUpPL/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.CALE5DUpPL/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.CALE5DUpPL/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.CALE5DUpPL/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 6000000.00 reads per min processed...  
 12000000.00 reads per min processed...  
 6000000.00 reads per min processed...  
 4800000.00 reads per min processed...  
 5000000.00 reads per min processed...  
 4500000.00 reads per min processed...  
 4666666.67 reads per min processed...  
 4363636.36 reads per min processed...  
 4500000.00 reads per min processed...  
 4285714.29 reads per min processed...  
 4400000.00 reads per min processed...  
 4500000.00 reads per min processed...  
 4333333.33 reads per min processed...  
 4421052.63 reads per min processed...  
 4285714.29 reads per min processed...  
 4363636.36 reads per min processed...  
 4250000.00 reads per min processed...  
 4320000.00 reads per min processed...  
 4384615.38 reads per min processed...  
 4285714.29 reads per min processed...  
 4200000.00 reads per min processed...  
 4258064.52 reads per min processed...  
 4181818.18 reads per min processed...  
 4114285.71 reads per min processed...  
 4166666.67 reads per min processed...  
 4105263.16 reads per min processed...  
 4153846.15 reads per min processed...  
 4097560.98 reads per min processed...  
 4046511.63 reads per min processed...  
 4090909.09 reads per min processed...  
 4043478.26 reads per min processed...  
 4085106.38 reads per min processed...  
 4125000.00 reads per min processed...  
 4163265.31 reads per min processed...  
 4117647.06 reads per min processed...  
 4153846.15 reads per min processed...  
 4111111.11 reads per min processed...  
 4145454.55 reads per min processed...  
 4105263.16 reads per min processed...  
 4137931.03 reads per min processed...  
 4100000.00 reads per min processed...  
 4131147.54 reads per min processed...  
 4161290.32 reads per min processed...  
 4125000.00 reads per min processed...  
 4153846.15 reads per min processed...  
 4246153.85 reads per min processed...  
 4272727.27 reads per min processed...  
 4235294.12 reads per min processed...  
 4260869.57 reads per min processed...  
 4285714.29 reads per min processed...  
 4250000.00 reads per min processed...  
 4273972.60 reads per min processed...  
 4297297.30 reads per min processed...  
 4263157.89 reads per min processed...  
 4285714.29 reads per min processed...  
 4307692.31 reads per min processed...  
 4329113.92 reads per min processed...  
 4296296.30 reads per min processed...  
 4317073.17 reads per min processed...  
 4285714.29 reads per min processed...  
 4305882.35 reads per min processed...  
 4325581.40 reads per min processed...  
 4295454.55 reads per min processed...  
 4314606.74 reads per min processed...  
 4285714.29 reads per min processed...  
 4304347.83 reads per min processed...  
 4322580.65 reads per min processed...  
 4294736.84 reads per min processed...  
 4312500.00 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.CALE5DUpPL/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.CALE5DUpPL/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.CALE5DUpPL/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.CALE5DUpPL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.CALE5DUpPL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.CALE5DUpPL/BVT_FFPE_TRNA_bst_01_01_A23WKFTLT4_2.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.CALE5DUpPL/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.CALE5DUpPL/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.CALE5DUpPL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -420597.315135
EM: Round [1] log likelihood: -420455.364706
EM: Round [2] log likelihood: -420400.768155
EM: Round [3] log likelihood: -420374.856625
EM: Round [4] log likelihood: -420361.226013
EM: Round [5] log likelihood: -420353.629526
EM: Round [6] log likelihood: -420349.219615
EM: Round [7] log likelihood: -420346.562581
EM: Round [8] log likelihood: -420344.897287
EM: Round [9] log likelihood: -420343.808742
EM: Round [10] log likelihood: -420343.066561
EM: Round [11] log likelihood: -420342.540166
EM: Round [12] log likelihood: -420342.153545
EM: Round [13] log likelihood: -420341.861009
EM: Round [14] log likelihood: -420341.634110
EM: Round [15] log likelihood: -420341.454481
EM: Round [16] log likelihood: -420341.309840
EM: Round [17] log likelihood: -420341.191700
EM: Round [18] log likelihood: -420341.094027
EM: Round [19] log likelihood: -420341.012418
EM: Round [20] log likelihood: -420340.943596
EM: Round [21] log likelihood: -420340.885070
EM: Round [22] log likelihood: -420340.834924
EM: Round [23] log likelihood: -420340.791662
EM: Round [24] log likelihood: -420340.754102
EM: Round [25] log likelihood: -420340.721300
EM: Round [26] log likelihood: -420340.692501
EM: Round [27] log likelihood: -420340.667087
EM: Round [28] log likelihood: -420340.644557
EM: Round [29] log likelihood: -420340.624497
EM: Round [30] log likelihood: -420340.606565
EM: Round [31] log likelihood: -420340.590476
EM: Round [32] log likelihood: -420340.575991
EM: Round [33] log likelihood: -420340.562909
EM: Round [34] log likelihood: -420340.551059
EM: Round [35] log likelihood: -420340.540296
EM: Round [36] log likelihood: -420340.530495
EM: Round [37] log likelihood: -420340.521551
EM: Round [38] log likelihood: -420340.513370
EM: Round [39] log likelihood: -420340.505873
EM: Round [40] log likelihood: -420340.498991
EM: Round [41] log likelihood: -420340.492661
EM: Round [42] log likelihood: -420340.486831
EM: Round [43] log likelihood: -420340.481454
EM: Round [44] log likelihood: -420340.476488
EM: Round [45] log likelihood: -420340.471895
EM: Round [46] log likelihood: -420340.467643
EM: Round [47] log likelihood: -420340.463703
EM: Round [48] log likelihood: -420340.460047
EM: Round [49] log likelihood: -420340.456652
EM: Round [50] log likelihood: -420340.453497
EM: Round [51] log likelihood: -420340.450562
EM: Round [52] log likelihood: -420340.447831
EM: Round [53] log likelihood: -420340.445286
EM: Round [54] log likelihood: -420340.442914
EM: Round [55] log likelihood: -420340.440702
EM: Round [56] log likelihood: -420340.438637
EM: Round [57] log likelihood: -420340.436709
EM: Round [58] log likelihood: -420340.434907
EM: Round [59] log likelihood: -420340.433223
EM: Round [60] log likelihood: -420340.431648
EM: Round [61] log likelihood: -420340.430174
EM: Round [62] log likelihood: -420340.428795
EM: Round [63] log likelihood: -420340.427503
EM: Round [64] log likelihood: -420340.426293
EM: Round [65] log likelihood: -420340.425158
EM: Round [66] log likelihood: -420340.424095
EM: Round [67] log likelihood: -420340.423097
EM: Round [68] log likelihood: -420340.422161
EM: Round [69] log likelihood: -420340.421282
EM: Round [70] log likelihood: -420340.420457
EM: Round [71] log likelihood: -420340.419683
EM: Round [72] log likelihood: -420340.418955
EM: Round [73] log likelihood: -420340.418271
EM: Round [74] log likelihood: -420340.417628
EM: Round [75] log likelihood: -420340.417023
EM: Round [76] log likelihood: -420340.416455
EM: Round [77] log likelihood: -420340.415919
EM: Round [78] log likelihood: -420340.415416
EM: Round [79] log likelihood: -420340.414942
EM: Round [80] log likelihood: -420340.414496
EM: Round [81] log likelihood: -420340.414075
EM: Round [82] log likelihood: -420340.413679
EM: Round [83] log likelihood: -420340.413306
EM: Round [84] log likelihood: -420340.412954
EM: Round [85] log likelihood: -420340.412622
EM: Round [86] log likelihood: -420340.412310
EM: Round [87] log likelihood: -420340.412015
EM: Round [88] log likelihood: -420340.411736
EM: Round [89] log likelihood: -420340.411474
EM: Round [90] log likelihood: -420340.411226
EM: Round [91] log likelihood: -420340.410991
EM: Round [92] log likelihood: -420340.410770
EM: Round [93] log likelihood: -420340.410561
EM: Round [94] log likelihood: -420340.410364
EM: Round [95] log likelihood: -420340.410178
EM: Round [96] log likelihood: -420340.410001
EM: Round [97] log likelihood: -420340.409834
EM: Round [98] log likelihood: -420340.409677
EM: Round [99] log likelihood: -420340.409528
EM: Round [100] log likelihood: -420340.409386
EM: Round [101] log likelihood: -420340.409253
EM: Round [102] log likelihood: -420340.409126
EM: Round [103] log likelihood: -420340.409006
EM: Round [104] log likelihood: -420340.408893
EM: Round [105] log likelihood: -420340.408785
EM: Round [106] log likelihood: -420340.408684
EM: Round [107] log likelihood: -420340.408587
EM: Stopping iterations at round 107 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -420272.696104
EM: Round [1] log likelihood: -420155.193264
EM: Round [2] log likelihood: -420111.413733
EM: Round [3] log likelihood: -420091.208659
EM: Round [4] log likelihood: -420080.814097
EM: Round [5] log likelihood: -420075.115079
EM: Round [6] log likelihood: -420071.834771
EM: Round [7] log likelihood: -420069.857764
EM: Round [8] log likelihood: -420068.609616
EM: Round [9] log likelihood: -420067.784490
EM: Round [10] log likelihood: -420067.214659
EM: Round [11] log likelihood: -420066.805266
EM: Round [12] log likelihood: -420066.500862
EM: Round [13] log likelihood: -420066.267874
EM: Round [14] log likelihood: -420066.085216
EM: Round [15] log likelihood: -420065.939156
EM: Round [16] log likelihood: -420065.820433
EM: Round [17] log likelihood: -420065.722600
EM: Round [18] log likelihood: -420065.641038
EM: Round [19] log likelihood: -420065.572356
EM: Round [20] log likelihood: -420065.514008
EM: Round [21] log likelihood: -420065.464052
EM: Round [22] log likelihood: -420065.420980
EM: Round [23] log likelihood: -420065.383607
EM: Round [24] log likelihood: -420065.350991
EM: Round [25] log likelihood: -420065.322375
EM: Round [26] log likelihood: -420065.297145
EM: Round [27] log likelihood: -420065.274801
EM: Round [28] log likelihood: -420065.254928
EM: Round [29] log likelihood: -420065.237187
EM: Round [30] log likelihood: -420065.221291
EM: Round [31] log likelihood: -420065.207001
EM: Round [32] log likelihood: -420065.194115
EM: Round [33] log likelihood: -420065.182462
EM: Round [34] log likelihood: -420065.171897
EM: Round [35] log likelihood: -420065.162294
EM: Round [36] log likelihood: -420065.153546
EM: Round [37] log likelihood: -420065.145560
EM: Round [38] log likelihood: -420065.138255
EM: Round [39] log likelihood: -420065.131562
EM: Round [40] log likelihood: -420065.125418
EM: Round [41] log likelihood: -420065.119771
EM: Round [42] log likelihood: -420065.114572
EM: Round [43] log likelihood: -420065.109780
EM: Round [44] log likelihood: -420065.105356
EM: Round [45] log likelihood: -420065.101269
EM: Round [46] log likelihood: -420065.097488
EM: Round [47] log likelihood: -420065.093988
EM: Round [48] log likelihood: -420065.090743
EM: Round [49] log likelihood: -420065.087733
EM: Round [50] log likelihood: -420065.084939
EM: Round [51] log likelihood: -420065.082343
EM: Round [52] log likelihood: -420065.079930
EM: Round [53] log likelihood: -420065.077684
EM: Round [54] log likelihood: -420065.075594
EM: Round [55] log likelihood: -420065.073647
EM: Round [56] log likelihood: -420065.071832
EM: Round [57] log likelihood: -420065.070140
EM: Round [58] log likelihood: -420065.068561
EM: Round [59] log likelihood: -420065.067087
EM: Round [60] log likelihood: -420065.065711
EM: Round [61] log likelihood: -420065.064425
EM: Round [62] log likelihood: -420065.063224
EM: Round [63] log likelihood: -420065.062100
EM: Round [64] log likelihood: -420065.061050
EM: Round [65] log likelihood: -420065.060067
EM: Round [66] log likelihood: -420065.059147
EM: Round [67] log likelihood: -420065.058285
EM: Round [68] log likelihood: -420065.057478
EM: Round [69] log likelihood: -420065.056723
EM: Round [70] log likelihood: -420065.056014
EM: Round [71] log likelihood: -420065.055351
EM: Round [72] log likelihood: -420065.054728
EM: Round [73] log likelihood: -420065.054145
EM: Round [74] log likelihood: -420065.053597
EM: Round [75] log likelihood: -420065.053083
EM: Round [76] log likelihood: -420065.052601
EM: Round [77] log likelihood: -420065.052149
EM: Round [78] log likelihood: -420065.051724
EM: Round [79] log likelihood: -420065.051325
EM: Round [80] log likelihood: -420065.050950
EM: Round [81] log likelihood: -420065.050598
EM: Round [82] log likelihood: -420065.050267
EM: Round [83] log likelihood: -420065.049956
EM: Round [84] log likelihood: -420065.049664
EM: Round [85] log likelihood: -420065.049389
EM: Round [86] log likelihood: -420065.049130
EM: Round [87] log likelihood: -420065.048887
EM: Round [88] log likelihood: -420065.048659
EM: Round [89] log likelihood: -420065.048443
EM: Round [90] log likelihood: -420065.048241
EM: Round [91] log likelihood: -420065.048050
EM: Round [92] log likelihood: -420065.047871
EM: Round [93] log likelihood: -420065.047702
EM: Round [94] log likelihood: -420065.047543
EM: Round [95] log likelihood: -420065.047393
EM: Round [96] log likelihood: -420065.047252
EM: Round [97] log likelihood: -420065.047119
EM: Round [98] log likelihood: -420065.046993
EM: Round [99] log likelihood: -420065.046875
EM: Round [100] log likelihood: -420065.046764
EM: Round [101] log likelihood: -420065.046659
EM: Round [102] log likelihood: -420065.046560
EM: Stopping iterations at round 102 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.CALE5DUpPL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.CALE5DUpPL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.CALE5DUpPL/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.CALE5DUpPL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.CALE5DUpPL/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.CALE5DUpPL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.CALE5DUpPL/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.CALE5DUpPL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.CALE5DUpPL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.CALE5DUpPL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.CALE5DUpPL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.CALE5DUpPL/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.CALE5DUpPL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.CALE5DUpPL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 202558469 > /tmp/nxf.CALE5DUpPL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.CALE5DUpPL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.CALE5DUpPL/ctat_genome_lib_build_dir > /tmp/nxf.CALE5DUpPL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.CALE5DUpPL/ctat_genome_lib_build_dir --annotate /tmp/nxf.CALE5DUpPL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.CALE5DUpPL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.CALE5DUpPL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.CALE5DUpPL/ctat_genome_lib_build_dir
-done, see /tmp/nxf.CALE5DUpPL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.CALE5DUpPL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.CALE5DUpPL/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 1795, filtered: 14673)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.CALE5DUpPL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.CALE5DUpPL/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.CALE5DUpPL/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
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WARNING, no entry stored in dbm for [ENSG00000278903.3]
WARNING, no entry stored in dbm for [ENSG00000224017.2]
WARNING, no entry stored in dbm for [ENSG00000251538.7]
WARNING, no entry stored in dbm for [ENSG00000254109.6]
WARNING, no entry stored in dbm for [ENSG00000268955.2]
WARNING, no entry stored in dbm for [ENSG00000185986.12]
WARNING, no entry stored in dbm for [ENSG00000254451.2]
WARNING, no entry stored in dbm for [ENSG00000258678.2]
WARNING, no entry stored in dbm for [ENSG00000207260.1]
WARNING, no entry stored in dbm for [ENSG00000267122.1]
WARNING, no entry stored in dbm for [ENSG00000234996.4]
WARNING, no entry stored in dbm for [ENSG00000226074.5]
WARNING, no entry stored in dbm for [ENSG00000283631.1]
WARNING, no entry stored in dbm for [ENSG00000271242.1]
WARNING, no entry stored in dbm for [ENSG00000254510.2]
WARNING, no entry stored in dbm for [ENSG00000228007.1]
WARNING, no entry stored in dbm for [ENSG00000243877.1]
WARNING, no entry stored in dbm for [ENSG00000185641.6]
WARNING, no entry stored in dbm for [ENSG00000204434.6]
WARNING, no entry stored in dbm for [ENSG00000204434.6]
WARNING, no entry stored in dbm for [ENSG00000231937.1]
WARNING, no entry stored in dbm for [ENSG00000187953.10]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000225867.1]
WARNING, no entry stored in dbm for [ENSG00000235892.1]
WARNING, no entry stored in dbm for [ENSG00000248911.2]
WARNING, no entry stored in dbm for [ENSG00000227593.2]
WARNING, no entry stored in dbm for [ENSG00000230251.1]
WARNING, no entry stored in dbm for [ENSG00000236990.1]
WARNING, no entry stored in dbm for [ENSG00000242686.4]
WARNING, no entry stored in dbm for [ENSG00000244119.1]
WARNING, no entry stored in dbm for [ENSG00000254544.1]
WARNING, no entry stored in dbm for [ENSG00000245526.11]
WARNING, no entry stored in dbm for [ENSG00000225075.1]
WARNING, no entry stored in dbm for [ENSG00000249661.1]
WARNING, no entry stored in dbm for [ENSG00000276717.2]
WARNING, no entry stored in dbm for [ENSG00000286887.1]
WARNING, no entry stored in dbm for [ENSG00000204758.8]
WARNING, no entry stored in dbm for [ENSG00000233997.5]
WARNING, no entry stored in dbm for [ENSG00000118976.5]
WARNING, no entry stored in dbm for [ENSG00000257135.7]
WARNING, no entry stored in dbm for [ENSG00000225377.6]
WARNING, no entry stored in dbm for [ENSG00000225159.1]
WARNING, no entry stored in dbm for [ENSG00000237445.2]
WARNING, no entry stored in dbm for [ENSG00000249353.2]
WARNING, no entry stored in dbm for [ENSG00000270066.3]
WARNING, no entry stored in dbm for [ENSG00000227646.7]
WARNING, no entry stored in dbm for [ENSG00000236991.6]
WARNING, no entry stored in dbm for [ENSG00000266916.7]
WARNING, no entry stored in dbm for [ENSG00000171658.8]
WARNING, no entry stored in dbm for [ENSG00000173077.16]
WARNING, no entry stored in dbm for [ENSG00000135502.19]
WARNING, no entry stored in dbm for [ENSG00000229192.6]
WARNING, no entry stored in dbm for [ENSG00000249917.3]
WARNING, no entry stored in dbm for [ENSG00000274357.1]
WARNING, no entry stored in dbm for [ENSG00000227629.1]
WARNING, no entry stored in dbm for [ENSG00000228118.3]
WARNING, no entry stored in dbm for [ENSG00000226543.3]
WARNING, no entry stored in dbm for [ENSG00000223850.1]
WARNING, no entry stored in dbm for [ENSG00000228323.2]
WARNING, no entry stored in dbm for [ENSG00000228323.2]
WARNING, no entry stored in dbm for [ENSG00000214955.5]
WARNING, no entry stored in dbm for [ENSG00000251141.6]
WARNING, no entry stored in dbm for [ENSG00000183604.14]
WARNING, no entry stored in dbm for [ENSG00000232862.5]
WARNING, no entry stored in dbm for [ENSG00000248206.2]
WARNING, no entry stored in dbm for [ENSG00000221288.1]
WARNING, no entry stored in dbm for [ENSG00000172965.17]
WARNING, no entry stored in dbm for [ENSG00000234231.4]
WARNING, no entry stored in dbm for [ENSG00000233325.3]
WARNING, no entry stored in dbm for [ENSG00000275374.1]
WARNING, no entry stored in dbm for [ENSG00000213117.4]
WARNING, no entry stored in dbm for [ENSG00000214548.18]
WARNING, no entry stored in dbm for [ENSG00000272419.6]
WARNING, no entry stored in dbm for [ENSG00000251629.7]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000249669.10]
WARNING, no entry stored in dbm for [ENSG00000264589.4]
WARNING, no entry stored in dbm for [ENSG00000270012.1]
WARNING, no entry stored in dbm for [ENSG00000286295.1]
WARNING, no entry stored in dbm for [ENSG00000247157.7]
WARNING, no entry stored in dbm for [ENSG00000243004.6]
WARNING, no entry stored in dbm for [ENSG00000216863.10]
WARNING, no entry stored in dbm for [ENSG00000223741.1]
WARNING, no entry stored in dbm for [ENSG00000205056.8]
WARNING, no entry stored in dbm for [ENSG00000286733.1]
WARNING, no entry stored in dbm for [ENSG00000273033.2]
WARNING, no entry stored in dbm for [ENSG00000204277.1]
WARNING, no entry stored in dbm for [ENSG00000248473.2]
WARNING, no entry stored in dbm for [ENSG00000233048.1]
WARNING, no entry stored in dbm for [ENSG00000236052.2]
WARNING, no entry stored in dbm for [ENSG00000227115.8]
WARNING, no entry stored in dbm for [ENSG00000261008.7]
WARNING, no entry stored in dbm for [ENSG00000239921.6]
WARNING, no entry stored in dbm for [ENSG00000225882.1]
WARNING, no entry stored in dbm for [ENSG00000242512.9]
WARNING, no entry stored in dbm for [ENSG00000281404.2]
WARNING, no entry stored in dbm for [ENSG00000228794.10]
WARNING, no entry stored in dbm for [ENSG00000249464.6]
WARNING, no entry stored in dbm for [ENSG00000232715.1]
WARNING, no entry stored in dbm for [ENSG00000277147.6]
WARNING, no entry stored in dbm for [ENSG00000225269.3]
WARNING, no entry stored in dbm for [ENSG00000285077.2]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000234787.8]
WARNING, no entry stored in dbm for [ENSG00000100181.22]
WARNING, no entry stored in dbm for [ENSG00000230530.2]
WARNING, no entry stored in dbm for [ENSG00000276758.1]
WARNING, no entry stored in dbm for [ENSG00000266258.1]
WARNING, no entry stored in dbm for [ENSG00000226696.6]
WARNING, no entry stored in dbm for [ENSG00000276092.1]
WARNING, no entry stored in dbm for [ENSG00000260034.1]
WARNING, no entry stored in dbm for [ENSG00000224699.9]
WARNING, no entry stored in dbm for [ENSG00000240668.1]
WARNING, no entry stored in dbm for [ENSG00000229320.3]
WARNING, no entry stored in dbm for [ENSG00000261144.1]
WARNING, no entry stored in dbm for [ENSG00000229386.3]
WARNING, no entry stored in dbm for [ENSG00000197332.9]
WARNING, no entry stored in dbm for [ENSG00000238035.8]
WARNING, no entry stored in dbm for [ENSG00000238035.8]
WARNING, no entry stored in dbm for [ENSG00000250878.3]
WARNING, no entry stored in dbm for [ENSG00000269378.1]
WARNING, no entry stored in dbm for [ENSG00000267100.1]
WARNING, no entry stored in dbm for [ENSG00000267586.7]
WARNING, no entry stored in dbm for [ENSG00000271646.1]
WARNING, no entry stored in dbm for [ENSG00000263946.1]
WARNING, no entry stored in dbm for [ENSG00000286675.1]
WARNING, no entry stored in dbm for [ENSG00000242147.3]
WARNING, no entry stored in dbm for [ENSG00000227000.2]
WARNING, no entry stored in dbm for [ENSG00000248529.5]
WARNING, no entry stored in dbm for [ENSG00000269069.1]
WARNING, no entry stored in dbm for [ENSG00000228941.1]
WARNING, no entry stored in dbm for [ENSG00000286263.1]
WARNING, no entry stored in dbm for [ENSG00000251557.2]
WARNING, no entry stored in dbm for [ENSG00000213924.3]
WARNING, no entry stored in dbm for [ENSG00000235784.2]
WARNING, no entry stored in dbm for [ENSG00000213412.3]
WARNING, no entry stored in dbm for [ENSG00000259722.2]
WARNING, no entry stored in dbm for [ENSG00000229384.2]
WARNING, no entry stored in dbm for [ENSG00000206341.7]
WARNING, no entry stored in dbm for [ENSG00000233606.2]
WARNING, no entry stored in dbm for [ENSG00000206341.7]
WARNING, no entry stored in dbm for [ENSG00000261404.7]
WARNING, no entry stored in dbm for [ENSG00000207637.1]
WARNING, no entry stored in dbm for [ENSG00000283041.1]
WARNING, no entry stored in dbm for [ENSG00000241549.8]
WARNING, no entry stored in dbm for [ENSG00000204529.4]
WARNING, no entry stored in dbm for [ENSG00000203489.3]
WARNING, no entry stored in dbm for [ENSG00000287226.1]
WARNING, no entry stored in dbm for [ENSG00000180389.7]
WARNING, no entry stored in dbm for [ENSG00000256581.1]
WARNING, no entry stored in dbm for [ENSG00000247363.2]
WARNING, no entry stored in dbm for [ENSG00000166104.15]
WARNING, no entry stored in dbm for [ENSG00000166104.15]
WARNING, no entry stored in dbm for [ENSG00000257698.2]
WARNING, no entry stored in dbm for [ENSG00000254349.6]
WARNING, no entry stored in dbm for [ENSG00000228948.2]
WARNING, no entry stored in dbm for [ENSG00000203334.4]
WARNING, no entry stored in dbm for [ENSG00000239920.2]
WARNING, no entry stored in dbm for [ENSG00000230590.11]
WARNING, no entry stored in dbm for [ENSG00000279863.1]
WARNING, no entry stored in dbm for [ENSG00000285844.2]
WARNING, no entry stored in dbm for [ENSG00000180211.5]
WARNING, no entry stored in dbm for [ENSG00000234983.1]
WARNING, no entry stored in dbm for [ENSG00000271795.1]
WARNING, no entry stored in dbm for [ENSG00000229835.2]
WARNING, no entry stored in dbm for [ENSG00000218357.3]
WARNING, no entry stored in dbm for [ENSG00000248837.7]
WARNING, no entry stored in dbm for [ENSG00000233893.2]
WARNING, no entry stored in dbm for [ENSG00000258837.1]
WARNING, no entry stored in dbm for [ENSG00000242207.1]
WARNING, no entry stored in dbm for [ENSG00000264044.1]
WARNING, no entry stored in dbm for [ENSG00000132204.14]
WARNING, no entry stored in dbm for [ENSG00000286346.1]
WARNING, no entry stored in dbm for [ENSG00000229140.11]
WARNING, no entry stored in dbm for [ENSG00000287428.1]
WARNING, no entry stored in dbm for [ENSG00000287373.1]
WARNING, no entry stored in dbm for [ENSG00000237064.1]
WARNING, no entry stored in dbm for [ENSG00000262155.2]
WARNING, no entry stored in dbm for [ENSG00000257510.2]
WARNING, no entry stored in dbm for [ENSG00000259683.1]
WARNING, no entry stored in dbm for [ENSG00000257221.4]
WARNING, no entry stored in dbm for [ENSG00000233576.1]
WARNING, no entry stored in dbm for [ENSG00000240499.7]
WARNING, no entry stored in dbm for [ENSG00000249786.7]
WARNING, no entry stored in dbm for [ENSG00000244306.11]
WARNING, no entry stored in dbm for [ENSG00000260525.1]
WARNING, no entry stored in dbm for [ENSG00000286846.1]
WARNING, no entry stored in dbm for [ENSG00000238150.1]
WARNING, no entry stored in dbm for [ENSG00000224165.6]
WARNING, no entry stored in dbm for [ENSG00000265393.1]
WARNING, no entry stored in dbm for [ENSG00000224415.1]
WARNING, no entry stored in dbm for [ENSG00000254275.6]
WARNING, no entry stored in dbm for [ENSG00000272578.5]
WARNING, no entry stored in dbm for [ENSG00000271856.1]
WARNING, no entry stored in dbm for [ENSG00000257612.2]
WARNING, no entry stored in dbm for [ENSG00000226950.8]
WARNING, no entry stored in dbm for [ENSG00000251381.8]
WARNING, no entry stored in dbm for [ENSG00000278917.1]
WARNING, no entry stored in dbm for [ENSG00000234193.1]
WARNING, no entry stored in dbm for [ENSG00000222041.11]
WARNING, no entry stored in dbm for [ENSG00000280032.1]
WARNING, no entry stored in dbm for [ENSG00000234589.4]
WARNING, no entry stored in dbm for [ENSG00000280019.1]
WARNING, no entry stored in dbm for [ENSG00000281491.1]
WARNING, no entry stored in dbm for [ENSG00000228878.8]
WARNING, no entry stored in dbm for [ENSG00000261184.3]
WARNING, no entry stored in dbm for [ENSG00000215908.10]
WARNING, no entry stored in dbm for [ENSG00000234380.2]
WARNING, no entry stored in dbm for [ENSG00000237773.7]
WARNING, no entry stored in dbm for [ENSG00000205105.6]
WARNING, no entry stored in dbm for [ENSG00000259118.5]
WARNING, no entry stored in dbm for [ENSG00000225178.5]
WARNING, no entry stored in dbm for [ENSG00000254697.1]
WARNING, no entry stored in dbm for [ENSG00000180747.15]
WARNING, no entry stored in dbm for [ENSG00000226989.1]
WARNING, no entry stored in dbm for [ENSG00000253558.1]
WARNING, no entry stored in dbm for [ENSG00000223738.3]
WARNING, no entry stored in dbm for [ENSG00000236795.1]
WARNING, no entry stored in dbm for [ENSG00000267175.5]
WARNING, no entry stored in dbm for [ENSG00000278969.1]
WARNING, no entry stored in dbm for [ENSG00000214182.5]
WARNING, no entry stored in dbm for [ENSG00000224918.1]
WARNING, no entry stored in dbm for [ENSG00000196295.12]
WARNING, no entry stored in dbm for [ENSG00000251504.1]
WARNING, no entry stored in dbm for [ENSG00000286024.1]
WARNING, no entry stored in dbm for [ENSG00000218418.2]
WARNING, no entry stored in dbm for [ENSG00000232862.5]
WARNING, no entry stored in dbm for [ENSG00000226223.1]
WARNING, no entry stored in dbm for [ENSG00000238184.1]
WARNING, no entry stored in dbm for [ENSG00000235904.3]
WARNING, no entry stored in dbm for [ENSG00000261616.1]
WARNING, no entry stored in dbm for [ENSG00000233077.1]
WARNING, no entry stored in dbm for [ENSG00000272168.8]
WARNING, no entry stored in dbm for [ENSG00000259343.7]
WARNING, no entry stored in dbm for [ENSG00000262979.1]
WARNING, no entry stored in dbm for [ENSG00000180539.8]
WARNING, no entry stored in dbm for [ENSG00000288596.2]
WARNING, no entry stored in dbm for [ENSG00000286620.1]
WARNING, no entry stored in dbm for [ENSG00000171987.3]
WARNING, no entry stored in dbm for [ENSG00000222019.7]
WARNING, no entry stored in dbm for [ENSG00000253966.1]
WARNING, no entry stored in dbm for [ENSG00000282851.2]
WARNING, no entry stored in dbm for [ENSG00000282851.2]
WARNING, no entry stored in dbm for [ENSG00000282925.1]
WARNING, no entry stored in dbm for [ENSG00000233967.7]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000279021.1]
WARNING, no entry stored in dbm for [ENSG00000187172.15]
WARNING, no entry stored in dbm for [ENSG00000250802.7]
WARNING, no entry stored in dbm for [ENSG00000253502.1]
WARNING, no entry stored in dbm for [ENSG00000265126.1]
WARNING, no entry stored in dbm for [ENSG00000214025.2]
WARNING, no entry stored in dbm for [ENSG00000267189.1]
WARNING, no entry stored in dbm for [ENSG00000224948.1]
WARNING, no entry stored in dbm for [ENSG00000227195.11]
WARNING, no entry stored in dbm for [ENSG00000197595.4]
WARNING, no entry stored in dbm for [ENSG00000249626.1]
WARNING, no entry stored in dbm for [ENSG00000250132.6]
WARNING, no entry stored in dbm for [ENSG00000257252.6]
WARNING, no entry stored in dbm for [ENSG00000220517.2]
WARNING, no entry stored in dbm for [ENSG00000235919.4]
WARNING, no entry stored in dbm for [ENSG00000285977.1]
WARNING, no entry stored in dbm for [ENSG00000286021.2]
WARNING, no entry stored in dbm for [ENSG00000254818.1]
WARNING, no entry stored in dbm for [ENSG00000250230.3]
WARNING, no entry stored in dbm for [ENSG00000255135.4]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000266171.1]
WARNING, no entry stored in dbm for [ENSG00000287999.1]
WARNING, no entry stored in dbm for [ENSG00000277878.1]
WARNING, no entry stored in dbm for [ENSG00000215067.10]
WARNING, no entry stored in dbm for [ENSG00000285847.2]
WARNING, no entry stored in dbm for [ENSG00000272750.1]
WARNING, no entry stored in dbm for [ENSG00000231791.1]
WARNING, no entry stored in dbm for [ENSG00000232499.2]
WARNING, no entry stored in dbm for [ENSG00000287398.1]
WARNING, no entry stored in dbm for [ENSG00000233983.2]
WARNING, no entry stored in dbm for [ENSG00000270066.3]
WARNING, no entry stored in dbm for [ENSG00000220154.2]
WARNING, no entry stored in dbm for [ENSG00000267492.1]
WARNING, no entry stored in dbm for [ENSG00000266356.1]
WARNING, no entry stored in dbm for [ENSG00000246203.2]
WARNING, no entry stored in dbm for [ENSG00000225032.5]
WARNING, no entry stored in dbm for [ENSG00000258792.4]
WARNING, no entry stored in dbm for [ENSG00000225032.5]
WARNING, no entry stored in dbm for [ENSG00000251034.2]
WARNING, no entry stored in dbm for [ENSG00000228392.3]
WARNING, no entry stored in dbm for [ENSG00000261438.1]
WARNING, no entry stored in dbm for [ENSG00000234261.4]
WARNING, no entry stored in dbm for [ENSG00000217648.1]
WARNING, no entry stored in dbm for [ENSG00000286674.1]
WARNING, no entry stored in dbm for [ENSG00000219023.1]
WARNING, no entry stored in dbm for [ENSG00000228274.4]
WARNING, no entry stored in dbm for [ENSG00000215022.7]
WARNING, no entry stored in dbm for [ENSG00000287633.1]
WARNING, no entry stored in dbm for [ENSG00000227165.9]
WARNING, no entry stored in dbm for [ENSG00000265018.6]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000246477.3]
WARNING, no entry stored in dbm for [ENSG00000248544.2]
WARNING, no entry stored in dbm for [ENSG00000239486.1]
WARNING, no entry stored in dbm for [ENSG00000230821.1]
WARNING, no entry stored in dbm for [ENSG00000275121.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000215154.6]
WARNING, no entry stored in dbm for [ENSG00000233836.7]
WARNING, no entry stored in dbm for [ENSG00000233836.7]
WARNING, no entry stored in dbm for [ENSG00000261819.1]
WARNING, no entry stored in dbm for [ENSG00000261273.1]
WARNING, no entry stored in dbm for [ENSG00000260413.1]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000218227.3]
WARNING, no entry stored in dbm for [ENSG00000283095.1]
WARNING, no entry stored in dbm for [ENSG00000223509.8]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000279880.1]
WARNING, no entry stored in dbm for [ENSG00000228507.1]
WARNING, no entry stored in dbm for [ENSG00000275888.1]
WARNING, no entry stored in dbm for [ENSG00000259697.2]
WARNING, no entry stored in dbm for [ENSG00000274751.1]
WARNING, no entry stored in dbm for [ENSG00000258167.1]
WARNING, no entry stored in dbm for [ENSG00000241770.1]
WARNING, no entry stored in dbm for [ENSG00000224479.6]
WARNING, no entry stored in dbm for [ENSG00000261759.1]
WARNING, no entry stored in dbm for [ENSG00000230952.1]
WARNING, no entry stored in dbm for [ENSG00000286358.1]
WARNING, no entry stored in dbm for [ENSG00000249001.5]
WARNING, no entry stored in dbm for [ENSG00000282057.1]
WARNING, no entry stored in dbm for [ENSG00000239268.3]
WARNING, no entry stored in dbm for [ENSG00000276538.1]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000268362.6]
WARNING, no entry stored in dbm for [ENSG00000248126.1]
WARNING, no entry stored in dbm for [ENSG00000244559.1]
WARNING, no entry stored in dbm for [ENSG00000259363.6]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000283415.2]
WARNING, no entry stored in dbm for [ENSG00000286699.1]
WARNING, no entry stored in dbm for [ENSG00000284707.2]
WARNING, no entry stored in dbm for [ENSG00000285679.2]
WARNING, no entry stored in dbm for [ENSG00000286539.1]
WARNING, no entry stored in dbm for [ENSG00000257337.7]
WARNING, no entry stored in dbm for [ENSG00000268652.1]
WARNING, no entry stored in dbm for [ENSG00000229212.8]
WARNING, no entry stored in dbm for [ENSG00000260005.6]
WARNING, no entry stored in dbm for [ENSG00000280138.1]
WARNING, no entry stored in dbm for [ENSG00000288079.1]
WARNING, no entry stored in dbm for [ENSG00000254485.5]
WARNING, no entry stored in dbm for [ENSG00000286193.2]
WARNING, no entry stored in dbm for [ENSG00000251131.2]
WARNING, no entry stored in dbm for [ENSG00000259595.1]
WARNING, no entry stored in dbm for [ENSG00000255621.1]
WARNING, no entry stored in dbm for [ENSG00000228984.3]
WARNING, no entry stored in dbm for [ENSG00000263276.1]
WARNING, no entry stored in dbm for [ENSG00000287163.1]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000264558.1]
WARNING, no entry stored in dbm for [ENSG00000259341.2]
WARNING, no entry stored in dbm for [ENSG00000259258.1]
WARNING, no entry stored in dbm for [ENSG00000213432.2]
WARNING, no entry stored in dbm for [ENSG00000259364.1]
WARNING, no entry stored in dbm for [ENSG00000225341.1]
WARNING, no entry stored in dbm for [ENSG00000186148.13]
WARNING, no entry stored in dbm for [ENSG00000253894.2]
WARNING, no entry stored in dbm for [ENSG00000275547.1]
WARNING, no entry stored in dbm for [ENSG00000267649.1]
WARNING, no entry stored in dbm for [ENSG00000279598.1]
WARNING, no entry stored in dbm for [ENSG00000270956.1]
WARNING, no entry stored in dbm for [ENSG00000233235.1]
WARNING, no entry stored in dbm for [ENSG00000216895.9]
WARNING, no entry stored in dbm for [ENSG00000280152.1]
WARNING, no entry stored in dbm for [ENSG00000261240.1]
WARNING, no entry stored in dbm for [ENSG00000214331.8]
WARNING, no entry stored in dbm for [ENSG00000286818.1]
WARNING, no entry stored in dbm for [ENSG00000243304.3]
WARNING, no entry stored in dbm for [ENSG00000255655.1]
WARNING, no entry stored in dbm for [ENSG00000224063.6]
WARNING, no entry stored in dbm for [ENSG00000279114.1]
WARNING, no entry stored in dbm for [ENSG00000224063.6]
WARNING, no entry stored in dbm for [ENSG00000282772.1]
WARNING, no entry stored in dbm for [ENSG00000228509.6]
WARNING, no entry stored in dbm for [ENSG00000269968.1]
WARNING, no entry stored in dbm for [ENSG00000283538.3]
WARNING, no entry stored in dbm for [ENSG00000262879.6]
WARNING, no entry stored in dbm for [ENSG00000267623.3]
WARNING, no entry stored in dbm for [ENSG00000274712.2]
WARNING, no entry stored in dbm for [ENSG00000274712.2]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000241057.2]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000254610.3]
WARNING, no entry stored in dbm for [ENSG00000248618.1]
WARNING, no entry stored in dbm for [ENSG00000269504.3]
WARNING, no entry stored in dbm for [ENSG00000285486.1]
WARNING, no entry stored in dbm for [ENSG00000262265.2]
WARNING, no entry stored in dbm for [ENSG00000267698.1]
WARNING, no entry stored in dbm for [ENSG00000225793.3]
WARNING, no entry stored in dbm for [ENSG00000272425.1]
WARNING, no entry stored in dbm for [ENSG00000249359.3]


	* STAR-Fusion complete.  See output: /tmp/nxf.CALE5DUpPL/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)