File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/17/80a9115a5c8c87d6588ca81c2fc0e2/.command.err
Size
558 bytes
Task
NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (BVT_FFPE_TRNA_bst_02_A23WKFTLT4_2)
Attempt

Content

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Processing Kallisto file: BVT_FFPE_TRNA_bst_02_A23WKFTLT4_2/abundance.h5
Successfully converted BVT_FFPE_TRNA_bst_02_A23WKFTLT4_2/abundance.h5 to BVT_FFPE_TRNA_bst_02_A23WKFTLT4_2_kallisto_mqc.tsv
  Sample: BVT_FFPE_TRNA_bst_02_A23WKFTLT4_2
  Mean Fragment Length: 132.6 bp
  Median Fragment Length: 125.0 bp
  pct_mito_est_counts: 0.003%
  pct_ribo_est_counts: 0.656%
  pct_hk_est_counts: 0.483%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.006%
  pct_ribo_tpm: 2.192%
  pct_hk_tpm: 0.784%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 0.007%