Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57184101	57184307	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000244174.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-201"; exon_number 1; exon_id "ENSE00003693591.1"; level 2; protein_id "ENSP00000244174.5"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14771.4"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058981.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57184101,57184307,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57184280	57184307	.	+	0	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000244174.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-201"; exon_number 1; exon_id "ENSE00003693591.1"; level 2; protein_id "ENSP00000244174.5"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14771.4"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058981.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57184280,57184307,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57189426	57189539	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000244174.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-201"; exon_number 2; exon_id "ENSE00001325991.1"; level 2; protein_id "ENSP00000244174.5"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14771.4"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058981.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57189426,57189539,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57189426	57189539	.	+	2	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000244174.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-201"; exon_number 2; exon_id "ENSE00001325991.1"; level 2; protein_id "ENSP00000244174.5"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14771.4"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058981.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57189426,57189539,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57189969	57190080	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000244174.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-201"; exon_number 3; exon_id "ENSE00001742205.1"; level 2; protein_id "ENSP00000244174.5"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14771.4"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058981.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57189969,57190080,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57189969	57190080	.	+	2	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000244174.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-201"; exon_number 3; exon_id "ENSE00001742205.1"; level 2; protein_id "ENSP00000244174.5"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14771.4"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058981.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57189969,57190080,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57190197	57190375	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000244174.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-201"; exon_number 4; exon_id "ENSE00001800113.1"; level 2; protein_id "ENSP00000244174.5"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14771.4"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058981.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57190197,57190375,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57190197	57190375	.	+	1	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000244174.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-201"; exon_number 4; exon_id "ENSE00001800113.1"; level 2; protein_id "ENSP00000244174.5"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14771.4"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058981.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57190197,57190375,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57190940	57191085	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000244174.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-201"; exon_number 5; exon_id "ENSE00000846398.1"; level 2; protein_id "ENSP00000244174.5"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14771.4"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058981.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57190940,57191085,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57190940	57191085	.	+	2	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000244174.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-201"; exon_number 5; exon_id "ENSE00000846398.1"; level 2; protein_id "ENSP00000244174.5"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14771.4"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058981.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57190940,57191085,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57191798	57191999	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000244174.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-201"; exon_number 6; exon_id "ENSE00001741000.1"; level 2; protein_id "ENSP00000244174.5"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14771.4"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058981.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57191798,57191999,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57191798	57191999	.	+	0	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000244174.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-201"; exon_number 6; exon_id "ENSE00001741000.1"; level 2; protein_id "ENSP00000244174.5"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14771.4"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058981.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57191798,57191999,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57192603	57192708	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000244174.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-201"; exon_number 7; exon_id "ENSE00001637342.1"; level 2; protein_id "ENSP00000244174.5"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14771.4"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058981.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57192603,57192708,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57192603	57192708	.	+	2	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000244174.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-201"; exon_number 7; exon_id "ENSE00001637342.1"; level 2; protein_id "ENSP00000244174.5"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14771.4"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058981.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57192603,57192708,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57194043	57194127	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000244174.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-201"; exon_number 8; exon_id "ENSE00003659134.1"; level 2; protein_id "ENSP00000244174.5"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14771.4"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058981.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57194043,57194127,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57194043	57194127	.	+	1	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000244174.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-201"; exon_number 8; exon_id "ENSE00003659134.1"; level 2; protein_id "ENSP00000244174.5"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14771.4"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058981.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57194043,57194127,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57196336	57197128	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000244174.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-201"; exon_number 9; exon_id "ENSE00001614034.2"; level 2; protein_id "ENSP00000244174.5"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14771.4"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058981.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57196336,57197128,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57196336	57196926	.	+	0	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000244174.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-201"; exon_number 9; exon_id "ENSE00001614034.2"; level 2; protein_id "ENSP00000244174.5"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14771.4"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058981.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57196336,57196926,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57184226	57184307	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000369423.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-202"; exon_number 1; exon_id "ENSE00001623885.1"; level 2; protein_id "ENSP00000358431.2"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59180.1"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058980.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57184226,57184307,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57184264	57184307	.	+	0	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000369423.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-202"; exon_number 1; exon_id "ENSE00001623885.1"; level 2; protein_id "ENSP00000358431.2"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59180.1"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058980.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57184264,57184307,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57187928	57188028	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000369423.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-202"; exon_number 2; exon_id "ENSE00003491675.1"; level 2; protein_id "ENSP00000358431.2"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59180.1"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058980.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57187928,57188028,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57187928	57188028	.	+	1	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000369423.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-202"; exon_number 2; exon_id "ENSE00003491675.1"; level 2; protein_id "ENSP00000358431.2"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59180.1"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058980.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57187928,57188028,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57189402	57189539	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000369423.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-202"; exon_number 3; exon_id "ENSE00003693534.1"; level 2; protein_id "ENSP00000358431.2"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59180.1"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058980.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57189402,57189539,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57189402	57189539	.	+	2	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000369423.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-202"; exon_number 3; exon_id "ENSE00003693534.1"; level 2; protein_id "ENSP00000358431.2"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59180.1"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058980.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57189402,57189539,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57189969	57190080	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000369423.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-202"; exon_number 4; exon_id "ENSE00001742205.1"; level 2; protein_id "ENSP00000358431.2"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59180.1"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058980.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57189969,57190080,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57189969	57190080	.	+	2	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000369423.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-202"; exon_number 4; exon_id "ENSE00001742205.1"; level 2; protein_id "ENSP00000358431.2"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59180.1"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058980.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57189969,57190080,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57190204	57190375	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000369423.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-202"; exon_number 5; exon_id "ENSE00001320232.1"; level 2; protein_id "ENSP00000358431.2"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59180.1"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058980.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57190204,57190375,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57190204	57190375	.	+	1	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000369423.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-202"; exon_number 5; exon_id "ENSE00001320232.1"; level 2; protein_id "ENSP00000358431.2"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59180.1"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058980.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57190204,57190375,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57190969	57191085	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000369423.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-202"; exon_number 6; exon_id "ENSE00001300194.1"; level 2; protein_id "ENSP00000358431.2"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59180.1"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058980.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57190969,57191085,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57190969	57191085	.	+	0	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000369423.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-202"; exon_number 6; exon_id "ENSE00001300194.1"; level 2; protein_id "ENSP00000358431.2"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59180.1"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058980.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57190969,57191085,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57191798	57191999	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000369423.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-202"; exon_number 7; exon_id "ENSE00001741000.1"; level 2; protein_id "ENSP00000358431.2"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59180.1"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058980.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57191798,57191999,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57191798	57191999	.	+	0	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000369423.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-202"; exon_number 7; exon_id "ENSE00001741000.1"; level 2; protein_id "ENSP00000358431.2"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59180.1"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058980.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57191798,57191999,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57192603	57192708	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000369423.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-202"; exon_number 8; exon_id "ENSE00001637342.1"; level 2; protein_id "ENSP00000358431.2"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59180.1"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058980.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57192603,57192708,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57192603	57192708	.	+	2	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000369423.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-202"; exon_number 8; exon_id "ENSE00001637342.1"; level 2; protein_id "ENSP00000358431.2"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59180.1"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058980.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57192603,57192708,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57196336	57197337	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000369423.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-202"; exon_number 9; exon_id "ENSE00003654520.1"; level 2; protein_id "ENSP00000358431.2"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59180.1"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058980.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57196336,57197337,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57196336	57196369	.	+	1	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000369423.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-202"; exon_number 9; exon_id "ENSE00003654520.1"; level 2; protein_id "ENSP00000358431.2"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59180.1"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058980.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57196336,57196369,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57184254	57184307	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000489233.6_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "processed_transcript"; transcript_name "IL9R-203"; exon_number 1; exon_id "ENSE00001867387.1"; level 2; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "PAR"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058982.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57184254,57184307,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57187850	57188028	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000489233.6_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "processed_transcript"; transcript_name "IL9R-203"; exon_number 2; exon_id "ENSE00001819281.1"; level 2; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "PAR"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058982.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57187850,57188028,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57189426	57189490	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000489233.6_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "processed_transcript"; transcript_name "IL9R-203"; exon_number 3; exon_id "ENSE00001903717.1"; level 2; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "PAR"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058982.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57189426,57189490,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57192634	57192708	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000494962.6_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "processed_transcript"; transcript_name "IL9R-204"; exon_number 1; exon_id "ENSE00001852003.1"; level 2; transcript_support_level "2"; hgnc_id "HGNC:6030"; tag "PAR"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058984.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57192634,57192708,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57194043	57194127	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000494962.6_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "processed_transcript"; transcript_name "IL9R-204"; exon_number 2; exon_id "ENSE00003642278.1"; level 2; transcript_support_level "2"; hgnc_id "HGNC:6030"; tag "PAR"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058984.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57194043,57194127,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57194419	57194566	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000494962.6_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "processed_transcript"; transcript_name "IL9R-204"; exon_number 3; exon_id "ENSE00001810078.1"; level 2; transcript_support_level "2"; hgnc_id "HGNC:6030"; tag "PAR"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058984.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57194419,57194566,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57184101	57184307	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000244174.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-201"; exon_number 1; exon_id "ENSE00003693591.1"; level 2; protein_id "ENSP00000244174.5"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14771.4"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058981.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57184101,57184307,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57184280	57184307	.	+	0	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000244174.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-201"; exon_number 1; exon_id "ENSE00003693591.1"; level 2; protein_id "ENSP00000244174.5"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14771.4"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058981.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57184280,57184307,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57189426	57189539	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000244174.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-201"; exon_number 2; exon_id "ENSE00001325991.1"; level 2; protein_id "ENSP00000244174.5"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14771.4"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058981.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57189426,57189539,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57189426	57189539	.	+	2	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000244174.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-201"; exon_number 2; exon_id "ENSE00001325991.1"; level 2; protein_id "ENSP00000244174.5"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14771.4"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058981.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57189426,57189539,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57189969	57190080	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000244174.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-201"; exon_number 3; exon_id "ENSE00001742205.1"; level 2; protein_id "ENSP00000244174.5"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14771.4"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058981.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57189969,57190080,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57189969	57190080	.	+	2	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000244174.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-201"; exon_number 3; exon_id "ENSE00001742205.1"; level 2; protein_id "ENSP00000244174.5"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14771.4"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058981.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57189969,57190080,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57190197	57190375	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000244174.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-201"; exon_number 4; exon_id "ENSE00001800113.1"; level 2; protein_id "ENSP00000244174.5"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14771.4"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058981.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57190197,57190375,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57190197	57190375	.	+	1	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000244174.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-201"; exon_number 4; exon_id "ENSE00001800113.1"; level 2; protein_id "ENSP00000244174.5"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14771.4"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058981.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57190197,57190375,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57190940	57191085	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000244174.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-201"; exon_number 5; exon_id "ENSE00000846398.1"; level 2; protein_id "ENSP00000244174.5"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14771.4"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058981.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57190940,57191085,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57190940	57191085	.	+	2	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000244174.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-201"; exon_number 5; exon_id "ENSE00000846398.1"; level 2; protein_id "ENSP00000244174.5"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14771.4"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058981.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57190940,57191085,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57191798	57191999	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000244174.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-201"; exon_number 6; exon_id "ENSE00001741000.1"; level 2; protein_id "ENSP00000244174.5"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14771.4"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058981.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57191798,57191999,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57191798	57191999	.	+	0	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000244174.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-201"; exon_number 6; exon_id "ENSE00001741000.1"; level 2; protein_id "ENSP00000244174.5"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14771.4"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058981.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57191798,57191999,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57192603	57192708	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000244174.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-201"; exon_number 7; exon_id "ENSE00001637342.1"; level 2; protein_id "ENSP00000244174.5"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14771.4"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058981.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57192603,57192708,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57192603	57192708	.	+	2	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000244174.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-201"; exon_number 7; exon_id "ENSE00001637342.1"; level 2; protein_id "ENSP00000244174.5"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14771.4"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058981.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57192603,57192708,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57194043	57194127	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000244174.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-201"; exon_number 8; exon_id "ENSE00003659134.1"; level 2; protein_id "ENSP00000244174.5"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14771.4"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058981.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57194043,57194127,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57194043	57194127	.	+	1	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000244174.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-201"; exon_number 8; exon_id "ENSE00003659134.1"; level 2; protein_id "ENSP00000244174.5"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14771.4"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058981.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57194043,57194127,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57196336	57197128	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000244174.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-201"; exon_number 9; exon_id "ENSE00001614034.2"; level 2; protein_id "ENSP00000244174.5"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14771.4"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058981.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57196336,57197128,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57196336	57196926	.	+	0	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000244174.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-201"; exon_number 9; exon_id "ENSE00001614034.2"; level 2; protein_id "ENSP00000244174.5"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14771.4"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058981.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57196336,57196926,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57184226	57184307	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000369423.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-202"; exon_number 1; exon_id "ENSE00001623885.1"; level 2; protein_id "ENSP00000358431.2"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59180.1"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058980.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57184226,57184307,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57184264	57184307	.	+	0	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000369423.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-202"; exon_number 1; exon_id "ENSE00001623885.1"; level 2; protein_id "ENSP00000358431.2"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59180.1"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058980.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57184264,57184307,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57187928	57188028	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000369423.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-202"; exon_number 2; exon_id "ENSE00003491675.1"; level 2; protein_id "ENSP00000358431.2"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59180.1"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058980.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57187928,57188028,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57187928	57188028	.	+	1	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000369423.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-202"; exon_number 2; exon_id "ENSE00003491675.1"; level 2; protein_id "ENSP00000358431.2"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59180.1"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058980.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57187928,57188028,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57189402	57189539	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000369423.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-202"; exon_number 3; exon_id "ENSE00003693534.1"; level 2; protein_id "ENSP00000358431.2"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59180.1"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058980.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57189402,57189539,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57189402	57189539	.	+	2	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000369423.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-202"; exon_number 3; exon_id "ENSE00003693534.1"; level 2; protein_id "ENSP00000358431.2"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59180.1"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058980.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57189402,57189539,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57189969	57190080	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000369423.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-202"; exon_number 4; exon_id "ENSE00001742205.1"; level 2; protein_id "ENSP00000358431.2"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59180.1"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058980.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57189969,57190080,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57189969	57190080	.	+	2	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000369423.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-202"; exon_number 4; exon_id "ENSE00001742205.1"; level 2; protein_id "ENSP00000358431.2"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59180.1"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058980.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57189969,57190080,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57190204	57190375	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000369423.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-202"; exon_number 5; exon_id "ENSE00001320232.1"; level 2; protein_id "ENSP00000358431.2"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59180.1"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058980.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57190204,57190375,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57190204	57190375	.	+	1	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000369423.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-202"; exon_number 5; exon_id "ENSE00001320232.1"; level 2; protein_id "ENSP00000358431.2"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59180.1"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058980.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57190204,57190375,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57190969	57191085	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000369423.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-202"; exon_number 6; exon_id "ENSE00001300194.1"; level 2; protein_id "ENSP00000358431.2"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59180.1"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058980.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57190969,57191085,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57190969	57191085	.	+	0	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000369423.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-202"; exon_number 6; exon_id "ENSE00001300194.1"; level 2; protein_id "ENSP00000358431.2"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59180.1"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058980.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57190969,57191085,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57191798	57191999	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000369423.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-202"; exon_number 7; exon_id "ENSE00001741000.1"; level 2; protein_id "ENSP00000358431.2"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59180.1"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058980.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57191798,57191999,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57191798	57191999	.	+	0	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000369423.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-202"; exon_number 7; exon_id "ENSE00001741000.1"; level 2; protein_id "ENSP00000358431.2"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59180.1"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058980.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57191798,57191999,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57192603	57192708	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000369423.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-202"; exon_number 8; exon_id "ENSE00001637342.1"; level 2; protein_id "ENSP00000358431.2"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59180.1"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058980.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57192603,57192708,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57192603	57192708	.	+	2	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000369423.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-202"; exon_number 8; exon_id "ENSE00001637342.1"; level 2; protein_id "ENSP00000358431.2"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59180.1"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058980.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57192603,57192708,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57196336	57197337	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000369423.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-202"; exon_number 9; exon_id "ENSE00003654520.1"; level 2; protein_id "ENSP00000358431.2"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59180.1"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058980.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57196336,57197337,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57196336	57196369	.	+	1	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000369423.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "protein_coding"; transcript_name "IL9R-202"; exon_number 9; exon_id "ENSE00003654520.1"; level 2; protein_id "ENSP00000358431.2"; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59180.1"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058980.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57196336,57196369,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57184254	57184307	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000489233.6_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "processed_transcript"; transcript_name "IL9R-203"; exon_number 1; exon_id "ENSE00001867387.1"; level 2; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "PAR"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058982.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57184254,57184307,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57187850	57188028	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000489233.6_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "processed_transcript"; transcript_name "IL9R-203"; exon_number 2; exon_id "ENSE00001819281.1"; level 2; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "PAR"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058982.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57187850,57188028,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57189426	57189490	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000489233.6_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "processed_transcript"; transcript_name "IL9R-203"; exon_number 3; exon_id "ENSE00001903717.1"; level 2; transcript_support_level "1"; hgnc_id "HGNC:6030"; tag "PAR"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058982.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57189426,57189490,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57192634	57192708	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000494962.6_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "processed_transcript"; transcript_name "IL9R-204"; exon_number 1; exon_id "ENSE00001852003.1"; level 2; transcript_support_level "2"; hgnc_id "HGNC:6030"; tag "PAR"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058984.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57192634,57192708,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57194043	57194127	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000494962.6_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "processed_transcript"; transcript_name "IL9R-204"; exon_number 2; exon_id "ENSE00003642278.1"; level 2; transcript_support_level "2"; hgnc_id "HGNC:6030"; tag "PAR"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058984.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57194043,57194127,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57194419	57194566	.	+	.	gene_id "IL9R^ENSG00000124334.17_PAR_Y"; transcript_id "ENST00000494962.6_PAR_Y"; gene_type "protein_coding"; gene_name "IL9R"; transcript_type "processed_transcript"; transcript_name "IL9R-204"; exon_number 3; exon_id "ENSE00001810078.1"; level 2; transcript_support_level "2"; hgnc_id "HGNC:6030"; tag "PAR"; havana_gene "OTTHUMG00000022720.1"; havana_transcript "OTTHUMT00000058984.1"; FI_gene_label "IL9R^ENSG00000124334.17_PAR_Y"; orig_coord_info "chrY,57194419,57194566,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57207346	57207668	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000476066.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "processed_transcript"; transcript_name "WASH6P-207"; exon_number 1; exon_id "ENSE00001885938.1"; level 2; transcript_support_level "5"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058829.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57207346,57207668,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57208026	57208083	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000476066.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "processed_transcript"; transcript_name "WASH6P-207"; exon_number 2; exon_id "ENSE00001913331.1"; level 2; transcript_support_level "5"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058829.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57208026,57208083,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57208214	57208312	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000476066.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "processed_transcript"; transcript_name "WASH6P-207"; exon_number 3; exon_id "ENSE00003684718.1"; level 2; transcript_support_level "5"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058829.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57208214,57208312,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57208519	57208665	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000476066.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "processed_transcript"; transcript_name "WASH6P-207"; exon_number 4; exon_id "ENSE00003462616.1"; level 2; transcript_support_level "5"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058829.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57208519,57208665,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57208843	57208935	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000476066.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "processed_transcript"; transcript_name "WASH6P-207"; exon_number 5; exon_id "ENSE00001952304.1"; level 2; transcript_support_level "5"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058829.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57208843,57208935,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57207481	57207668	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000359512.8_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "protein_coding"; transcript_name "WASH6P-202"; exon_number 1; exon_id "ENSE00001676861.2"; level 2; protein_id "ENSP00000504557.1"; transcript_support_level "NA"; hgnc_id "HGNC:31685"; tag "basic"; tag "appris_principal_1"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57207481,57207668,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57207481	57207668	.	+	0	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000359512.8_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "protein_coding"; transcript_name "WASH6P-202"; exon_number 1; exon_id "ENSE00001676861.2"; level 2; protein_id "ENSP00000504557.1"; transcript_support_level "NA"; hgnc_id "HGNC:31685"; tag "basic"; tag "appris_principal_1"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57207481,57207668,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57208201	57208312	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000359512.8_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "protein_coding"; transcript_name "WASH6P-202"; exon_number 2; exon_id "ENSE00001793801.1"; level 2; protein_id "ENSP00000504557.1"; transcript_support_level "NA"; hgnc_id "HGNC:31685"; tag "basic"; tag "appris_principal_1"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57208201,57208312,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57208201	57208312	.	+	1	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000359512.8_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "protein_coding"; transcript_name "WASH6P-202"; exon_number 2; exon_id "ENSE00001793801.1"; level 2; protein_id "ENSP00000504557.1"; transcript_support_level "NA"; hgnc_id "HGNC:31685"; tag "basic"; tag "appris_principal_1"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57208201,57208312,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57208519	57208665	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000359512.8_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "protein_coding"; transcript_name "WASH6P-202"; exon_number 3; exon_id "ENSE00003905033.1"; level 2; protein_id "ENSP00000504557.1"; transcript_support_level "NA"; hgnc_id "HGNC:31685"; tag "basic"; tag "appris_principal_1"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57208519,57208665,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57208519	57208665	.	+	0	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000359512.8_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "protein_coding"; transcript_name "WASH6P-202"; exon_number 3; exon_id "ENSE00003905033.1"; level 2; protein_id "ENSP00000504557.1"; transcript_support_level "NA"; hgnc_id "HGNC:31685"; tag "basic"; tag "appris_principal_1"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57208519,57208665,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57208843	57208979	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000359512.8_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "protein_coding"; transcript_name "WASH6P-202"; exon_number 4; exon_id "ENSE00003905695.1"; level 2; protein_id "ENSP00000504557.1"; transcript_support_level "NA"; hgnc_id "HGNC:31685"; tag "basic"; tag "appris_principal_1"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57208843,57208979,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57208843	57208979	.	+	0	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000359512.8_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "protein_coding"; transcript_name "WASH6P-202"; exon_number 4; exon_id "ENSE00003905695.1"; level 2; protein_id "ENSP00000504557.1"; transcript_support_level "NA"; hgnc_id "HGNC:31685"; tag "basic"; tag "appris_principal_1"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57208843,57208979,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57209219	57209354	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000359512.8_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "protein_coding"; transcript_name "WASH6P-202"; exon_number 5; exon_id "ENSE00003909984.1"; level 2; protein_id "ENSP00000504557.1"; transcript_support_level "NA"; hgnc_id "HGNC:31685"; tag "basic"; tag "appris_principal_1"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57209219,57209354,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57209219	57209354	.	+	1	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000359512.8_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "protein_coding"; transcript_name "WASH6P-202"; exon_number 5; exon_id "ENSE00003909984.1"; level 2; protein_id "ENSP00000504557.1"; transcript_support_level "NA"; hgnc_id "HGNC:31685"; tag "basic"; tag "appris_principal_1"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57209219,57209354,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57209532	57209733	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000359512.8_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "protein_coding"; transcript_name "WASH6P-202"; exon_number 6; exon_id "ENSE00003910082.1"; level 2; protein_id "ENSP00000504557.1"; transcript_support_level "NA"; hgnc_id "HGNC:31685"; tag "basic"; tag "appris_principal_1"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57209532,57209733,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57209532	57209733	.	+	0	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000359512.8_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "protein_coding"; transcript_name "WASH6P-202"; exon_number 6; exon_id "ENSE00003910082.1"; level 2; protein_id "ENSP00000504557.1"; transcript_support_level "NA"; hgnc_id "HGNC:31685"; tag "basic"; tag "appris_principal_1"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57209532,57209733,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57209822	57209980	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000359512.8_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "protein_coding"; transcript_name "WASH6P-202"; exon_number 7; exon_id "ENSE00003908490.1"; level 2; protein_id "ENSP00000504557.1"; transcript_support_level "NA"; hgnc_id "HGNC:31685"; tag "basic"; tag "appris_principal_1"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57209822,57209980,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57209822	57209980	.	+	2	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000359512.8_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "protein_coding"; transcript_name "WASH6P-202"; exon_number 7; exon_id "ENSE00003908490.1"; level 2; protein_id "ENSP00000504557.1"; transcript_support_level "NA"; hgnc_id "HGNC:31685"; tag "basic"; tag "appris_principal_1"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57209822,57209980,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57210640	57210792	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000359512.8_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "protein_coding"; transcript_name "WASH6P-202"; exon_number 8; exon_id "ENSE00003906775.1"; level 2; protein_id "ENSP00000504557.1"; transcript_support_level "NA"; hgnc_id "HGNC:31685"; tag "basic"; tag "appris_principal_1"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57210640,57210792,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57210640	57210792	.	+	2	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000359512.8_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "protein_coding"; transcript_name "WASH6P-202"; exon_number 8; exon_id "ENSE00003906775.1"; level 2; protein_id "ENSP00000504557.1"; transcript_support_level "NA"; hgnc_id "HGNC:31685"; tag "basic"; tag "appris_principal_1"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57210640,57210792,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57211552	57211620	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000359512.8_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "protein_coding"; transcript_name "WASH6P-202"; exon_number 9; exon_id "ENSE00003905275.1"; level 2; protein_id "ENSP00000504557.1"; transcript_support_level "NA"; hgnc_id "HGNC:31685"; tag "basic"; tag "appris_principal_1"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57211552,57211620,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57211552	57211620	.	+	2	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000359512.8_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "protein_coding"; transcript_name "WASH6P-202"; exon_number 9; exon_id "ENSE00003905275.1"; level 2; protein_id "ENSP00000504557.1"; transcript_support_level "NA"; hgnc_id "HGNC:31685"; tag "basic"; tag "appris_principal_1"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57211552,57211620,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57211761	57211894	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000359512.8_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "protein_coding"; transcript_name "WASH6P-202"; exon_number 10; exon_id "ENSE00001416295.3"; level 2; protein_id "ENSP00000504557.1"; transcript_support_level "NA"; hgnc_id "HGNC:31685"; tag "basic"; tag "appris_principal_1"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57211761,57211894,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	CDS	57211761	57211891	.	+	2	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000359512.8_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "protein_coding"; transcript_name "WASH6P-202"; exon_number 10; exon_id "ENSE00001416295.3"; level 2; protein_id "ENSP00000504557.1"; transcript_support_level "NA"; hgnc_id "HGNC:31685"; tag "basic"; tag "appris_principal_1"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57211761,57211891,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57207848	57209729	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000461007.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "retained_intron"; transcript_name "WASH6P-204"; exon_number 1; exon_id "ENSE00001930880.1"; level 2; transcript_support_level "2"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058840.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57207848,57209729,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57209822	57212183	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000461007.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "retained_intron"; transcript_name "WASH6P-204"; exon_number 2; exon_id "ENSE00001940208.1"; level 2; transcript_support_level "2"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058840.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57209822,57212183,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57207965	57208312	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000496011.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "retained_intron"; transcript_name "WASH6P-214"; exon_number 1; exon_id "ENSE00001911120.1"; level 2; transcript_support_level "5"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058831.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57207965,57208312,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57208519	57208665	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000496011.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "retained_intron"; transcript_name "WASH6P-214"; exon_number 2; exon_id "ENSE00003462616.1"; level 2; transcript_support_level "5"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058831.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57208519,57208665,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57208843	57208979	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000496011.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "retained_intron"; transcript_name "WASH6P-214"; exon_number 3; exon_id "ENSE00003614781.1"; level 2; transcript_support_level "5"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058831.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57208843,57208979,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57209532	57209727	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000496011.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "retained_intron"; transcript_name "WASH6P-214"; exon_number 4; exon_id "ENSE00001876909.1"; level 2; transcript_support_level "5"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058831.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57209532,57209727,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57208197	57208312	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000479401.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "processed_transcript"; transcript_name "WASH6P-208"; exon_number 1; exon_id "ENSE00001744356.2"; level 2; transcript_support_level "5"; hgnc_id "HGNC:31685"; tag "non_canonical_TEC"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058828.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57208197,57208312,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57208519	57208665	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000479401.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "processed_transcript"; transcript_name "WASH6P-208"; exon_number 2; exon_id "ENSE00003462616.1"; level 2; transcript_support_level "5"; hgnc_id "HGNC:31685"; tag "non_canonical_TEC"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058828.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57208519,57208665,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57208834	57208979	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000479401.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "processed_transcript"; transcript_name "WASH6P-208"; exon_number 3; exon_id "ENSE00001821116.1"; level 2; transcript_support_level "5"; hgnc_id "HGNC:31685"; tag "non_canonical_TEC"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058828.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57208834,57208979,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57209219	57209354	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000479401.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "processed_transcript"; transcript_name "WASH6P-208"; exon_number 4; exon_id "ENSE00003682647.1"; level 2; transcript_support_level "5"; hgnc_id "HGNC:31685"; tag "non_canonical_TEC"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058828.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57209219,57209354,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57209532	57209733	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000479401.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "processed_transcript"; transcript_name "WASH6P-208"; exon_number 5; exon_id "ENSE00003663894.1"; level 2; transcript_support_level "5"; hgnc_id "HGNC:31685"; tag "non_canonical_TEC"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058828.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57209532,57209733,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57209822	57209855	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000479401.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "processed_transcript"; transcript_name "WASH6P-208"; exon_number 6; exon_id "ENSE00001868242.1"; level 2; transcript_support_level "5"; hgnc_id "HGNC:31685"; tag "non_canonical_TEC"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058828.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57209822,57209855,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57208208	57208312	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000340131.12_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "retained_intron"; transcript_name "WASH6P-201"; exon_number 1; exon_id "ENSE00001861535.1"; level 2; transcript_support_level "1"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058837.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57208208,57208312,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57208519	57208665	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000340131.12_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "retained_intron"; transcript_name "WASH6P-201"; exon_number 2; exon_id "ENSE00003462616.1"; level 2; transcript_support_level "1"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058837.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57208519,57208665,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57208843	57209354	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000340131.12_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "retained_intron"; transcript_name "WASH6P-201"; exon_number 3; exon_id "ENSE00001818153.1"; level 2; transcript_support_level "1"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058837.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57208843,57209354,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57209532	57209729	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000340131.12_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "retained_intron"; transcript_name "WASH6P-201"; exon_number 4; exon_id "ENSE00001909874.1"; level 2; transcript_support_level "1"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058837.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57209532,57209729,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57209822	57209980	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000340131.12_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "retained_intron"; transcript_name "WASH6P-201"; exon_number 5; exon_id "ENSE00003572814.1"; level 2; transcript_support_level "1"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058837.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57209822,57209980,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57210640	57210792	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000340131.12_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "retained_intron"; transcript_name "WASH6P-201"; exon_number 6; exon_id "ENSE00003576210.1"; level 2; transcript_support_level "1"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058837.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57210640,57210792,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57211552	57211620	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000340131.12_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "retained_intron"; transcript_name "WASH6P-201"; exon_number 7; exon_id "ENSE00003627301.1"; level 2; transcript_support_level "1"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058837.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57211552,57211620,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57211761	57212186	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000340131.12_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "retained_intron"; transcript_name "WASH6P-201"; exon_number 8; exon_id "ENSE00001956598.1"; level 2; transcript_support_level "1"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058837.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57211761,57212186,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57208208	57208312	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000492963.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "retained_intron"; transcript_name "WASH6P-213"; exon_number 1; exon_id "ENSE00001861535.1"; level 2; transcript_support_level "5"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058839.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57208208,57208312,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57208519	57208665	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000492963.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "retained_intron"; transcript_name "WASH6P-213"; exon_number 2; exon_id "ENSE00003462616.1"; level 2; transcript_support_level "5"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058839.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57208519,57208665,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57208843	57209354	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000492963.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "retained_intron"; transcript_name "WASH6P-213"; exon_number 3; exon_id "ENSE00001818153.1"; level 2; transcript_support_level "5"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058839.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57208843,57209354,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57209532	57209729	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000492963.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "retained_intron"; transcript_name "WASH6P-213"; exon_number 4; exon_id "ENSE00001909874.1"; level 2; transcript_support_level "5"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058839.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57209532,57209729,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57209822	57211620	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000492963.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "retained_intron"; transcript_name "WASH6P-213"; exon_number 5; exon_id "ENSE00001952874.1"; level 2; transcript_support_level "5"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058839.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57209822,57211620,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57211761	57212186	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000492963.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "retained_intron"; transcript_name "WASH6P-213"; exon_number 6; exon_id "ENSE00001956598.1"; level 2; transcript_support_level "5"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058839.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57211761,57212186,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57208208	57208312	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000460206.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "retained_intron"; transcript_name "WASH6P-203"; exon_number 1; exon_id "ENSE00001861535.1"; level 2; transcript_support_level "5"; hgnc_id "HGNC:31685"; tag "non_canonical_TEC"; tag "not_best_in_genome_evidence"; tag "dotter_confirmed"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058838.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57208208,57208312,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57208519	57208665	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000460206.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "retained_intron"; transcript_name "WASH6P-203"; exon_number 2; exon_id "ENSE00003462616.1"; level 2; transcript_support_level "5"; hgnc_id "HGNC:31685"; tag "non_canonical_TEC"; tag "not_best_in_genome_evidence"; tag "dotter_confirmed"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058838.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57208519,57208665,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57208834	57209354	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000460206.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "retained_intron"; transcript_name "WASH6P-203"; exon_number 3; exon_id "ENSE00001906282.1"; level 2; transcript_support_level "5"; hgnc_id "HGNC:31685"; tag "non_canonical_TEC"; tag "not_best_in_genome_evidence"; tag "dotter_confirmed"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058838.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57208834,57209354,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57209532	57209733	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000460206.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "retained_intron"; transcript_name "WASH6P-203"; exon_number 4; exon_id "ENSE00003663894.1"; level 2; transcript_support_level "5"; hgnc_id "HGNC:31685"; tag "non_canonical_TEC"; tag "not_best_in_genome_evidence"; tag "dotter_confirmed"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058838.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57209532,57209733,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57209822	57209980	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000460206.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "retained_intron"; transcript_name "WASH6P-203"; exon_number 5; exon_id "ENSE00003572814.1"; level 2; transcript_support_level "5"; hgnc_id "HGNC:31685"; tag "non_canonical_TEC"; tag "not_best_in_genome_evidence"; tag "dotter_confirmed"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058838.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57209822,57209980,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57210640	57210792	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000460206.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "retained_intron"; transcript_name "WASH6P-203"; exon_number 6; exon_id "ENSE00003576210.1"; level 2; transcript_support_level "5"; hgnc_id "HGNC:31685"; tag "non_canonical_TEC"; tag "not_best_in_genome_evidence"; tag "dotter_confirmed"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058838.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57210640,57210792,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57211552	57211620	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000460206.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "retained_intron"; transcript_name "WASH6P-203"; exon_number 7; exon_id "ENSE00003627301.1"; level 2; transcript_support_level "5"; hgnc_id "HGNC:31685"; tag "non_canonical_TEC"; tag "not_best_in_genome_evidence"; tag "dotter_confirmed"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058838.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57211552,57211620,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57211761	57212230	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000460206.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "retained_intron"; transcript_name "WASH6P-203"; exon_number 8; exon_id "ENSE00001856109.1"; level 2; transcript_support_level "5"; hgnc_id "HGNC:31685"; tag "non_canonical_TEC"; tag "not_best_in_genome_evidence"; tag "dotter_confirmed"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058838.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57211761,57212230,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57208519	57208979	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000475594.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "retained_intron"; transcript_name "WASH6P-206"; exon_number 1; exon_id "ENSE00001825471.1"; level 2; transcript_support_level "5"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058832.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57208519,57208979,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57209532	57209612	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000475594.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "retained_intron"; transcript_name "WASH6P-206"; exon_number 2; exon_id "ENSE00001887004.1"; level 2; transcript_support_level "5"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058832.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57209532,57209612,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57208519	57208665	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000482170.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "processed_transcript"; transcript_name "WASH6P-209"; exon_number 1; exon_id "ENSE00003462616.1"; level 2; transcript_support_level "5"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058830.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57208519,57208665,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57208843	57209059	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000482170.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "processed_transcript"; transcript_name "WASH6P-209"; exon_number 2; exon_id "ENSE00001951141.1"; level 2; transcript_support_level "5"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058830.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57208843,57209059,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57209219	57209354	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000482170.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "processed_transcript"; transcript_name "WASH6P-209"; exon_number 3; exon_id "ENSE00003682647.1"; level 2; transcript_support_level "5"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058830.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57209219,57209354,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57209532	57209729	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000482170.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "processed_transcript"; transcript_name "WASH6P-209"; exon_number 4; exon_id "ENSE00001909874.1"; level 2; transcript_support_level "5"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058830.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57209532,57209729,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57209822	57209909	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000482170.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "processed_transcript"; transcript_name "WASH6P-209"; exon_number 5; exon_id "ENSE00001851840.1"; level 2; transcript_support_level "5"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058830.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57209822,57209909,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57208519	57208665	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000484415.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "retained_intron"; transcript_name "WASH6P-212"; exon_number 1; exon_id "ENSE00003462616.1"; level 2; transcript_support_level "5"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058825.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57208519,57208665,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57208843	57208979	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000484415.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "retained_intron"; transcript_name "WASH6P-212"; exon_number 2; exon_id "ENSE00003614781.1"; level 2; transcript_support_level "5"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058825.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57208843,57208979,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57209219	57209354	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000484415.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "retained_intron"; transcript_name "WASH6P-212"; exon_number 3; exon_id "ENSE00003682647.1"; level 2; transcript_support_level "5"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058825.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57209219,57209354,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57209532	57209729	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000484415.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "retained_intron"; transcript_name "WASH6P-212"; exon_number 4; exon_id "ENSE00001909874.1"; level 2; transcript_support_level "5"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058825.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57209532,57209729,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57209822	57212183	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000484415.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "retained_intron"; transcript_name "WASH6P-212"; exon_number 5; exon_id "ENSE00001940208.1"; level 2; transcript_support_level "5"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058825.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57209822,57212183,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57209306	57209733	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000483079.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "retained_intron"; transcript_name "WASH6P-210"; exon_number 1; exon_id "ENSE00001930440.1"; level 2; transcript_support_level "1"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058833.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57209306,57209733,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57209822	57210051	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000483079.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "retained_intron"; transcript_name "WASH6P-210"; exon_number 2; exon_id "ENSE00001937341.1"; level 2; transcript_support_level "1"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058833.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57209822,57210051,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57209887	57209980	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000496301.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "retained_intron"; transcript_name "WASH6P-215"; exon_number 1; exon_id "ENSE00001846301.1"; level 2; transcript_support_level "2"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058827.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57209887,57209980,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57210640	57212186	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000496301.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "retained_intron"; transcript_name "WASH6P-215"; exon_number 2; exon_id "ENSE00001870442.1"; level 2; transcript_support_level "2"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058827.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57210640,57212186,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57210344	57210792	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000483286.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "retained_intron"; transcript_name "WASH6P-211"; exon_number 1; exon_id "ENSE00001896212.1"; level 2; transcript_support_level "1"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058834.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57210344,57210792,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57211552	57211620	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000483286.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "retained_intron"; transcript_name "WASH6P-211"; exon_number 2; exon_id "ENSE00003627301.1"; level 2; transcript_support_level "1"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058834.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57211552,57211620,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57211761	57212074	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000483286.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "retained_intron"; transcript_name "WASH6P-211"; exon_number 3; exon_id "ENSE00001531705.3"; level 2; transcript_support_level "1"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058834.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57211761,57212074,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57210591	57210792	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000464205.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "processed_transcript"; transcript_name "WASH6P-205"; exon_number 1; exon_id "ENSE00001942785.1"; level 2; transcript_support_level "2"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058835.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57210591,57210792,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57211552	57211569	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000464205.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "processed_transcript"; transcript_name "WASH6P-205"; exon_number 2; exon_id "ENSE00003785071.1"; level 2; transcript_support_level "2"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058835.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57211552,57211569,+";
Error, chr discrepancy in gtf info for chrY	HAVANA	exon	57211761	57212074	.	+	.	gene_id "WASH6P^ENSG00000182484.15_PAR_Y"; transcript_id "ENST00000464205.6_PAR_Y"; gene_type "protein_coding"; gene_name "WASH6P"; transcript_type "processed_transcript"; transcript_name "WASH6P-205"; exon_number 3; exon_id "ENSE00001531705.3"; level 2; transcript_support_level "2"; hgnc_id "HGNC:31685"; tag "PAR"; havana_gene "OTTHUMG00000022677.5"; havana_transcript "OTTHUMT00000058835.1"; FI_gene_label "WASH6P^ENSG00000182484.15_PAR_Y"; orig_coord_info "chrY,57211761,57212074,+";
Done.
-parsing GTF file: /tmp/nxf.40GxZtQfZF/BVT_FFPE_TRNA_bld_02_A23WKFTLT4_2.gtf
* Running CMD: /usr/local/bin/STAR  --runThreadN 8  --genomeDir /tmp/nxf.40GxZtQfZF/ctat_genome_lib_build_dir/ref_genome.fa.star.idx  --outSAMtype BAM SortedByCoordinate  --twopassMode None  --alignSJDBoverhangMin 10  --genomeSuffixLengthMax 10000 --limitBAMsortRAM 47271261705  --alignInsertionFlush Right   --alignMatesGapMax 100000  --alignIntronMax 100000  --outSAMattributes All  --readFilesIn /tmp/nxf.40GxZtQfZF/BVT_FFPE_TRNA_bld_02_A23WKFTLT4_2_1.fastp.fastq.gz /tmp/nxf.40GxZtQfZF/BVT_FFPE_TRNA_bld_02_A23WKFTLT4_2_2.fastp.fastq.gz  --genomeFastaFiles /tmp/nxf.40GxZtQfZF/fi_workdir/BVT_FFPE_TRNA_bld_02_A23WKFTLT4_2.fa  --outSAMfilter KeepAllAddedReferences  --sjdbGTFfile /tmp/nxf.40GxZtQfZF/fi_workdir/BVT_FFPE_TRNA_bld_02_A23WKFTLT4_2.gtf  --alignSJstitchMismatchNmax 5 -1 5 5  --scoreGapNoncan -6  --readFilesCommand 'gunzip -c' 
* Running CMD: mv Aligned.sortedByCoord.out.bam BVT_FFPE_TRNA_bld_02_A23WKFTLT4_2.star.sortedByCoord.out.bam
* Running CMD: samtools index BVT_FFPE_TRNA_bld_02_A23WKFTLT4_2.star.sortedByCoord.out.bam
11:14:59 : INFO : Done.
-parsing GTF file: /tmp/nxf.40GxZtQfZF/fi_workdir/BVT_FFPE_TRNA_bld_02_A23WKFTLT4_2.gtf
-parsing /tmp/nxf.40GxZtQfZF/fi_workdir/BVT_FFPE_TRNA_bld_02_A23WKFTLT4_2.star.cSorted.dupsMarked.bam

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[4230000]   -done parsing /tmp/nxf.40GxZtQfZF/fi_workdir/BVT_FFPE_TRNA_bld_02_A23WKFTLT4_2.star.cSorted.dupsMarked.bam.  Extracting junction info.
junction read elimination tally: $VAR1 = {
          'num_hits: 3 != num_counted_on_fusion_contigs 1 ' => 249,
          'exons hit < 2' => 8,
          'num_hits: 4 != num_counted_on_fusion_contigs 2 ' => 22,
          'small anchor length' => 87,
          'seq-similar region overlap' => 4,
          'num_hits: 6 != num_counted_on_fusion_contigs 2 ' => 10,
          'num_hits: 2 != num_counted_on_fusion_contigs 1 ' => 812,
          'low complexity anchor region' => 10,
          'per_id < 96' => 22590,
          'num_hits: 3 != num_counted_on_fusion_contigs 2 ' => 220,
          'excessive soft clipping' => 32679,
          'num_hits: 4 != num_counted_on_fusion_contigs 3 ' => 99,
          'num_hits: 4 != num_counted_on_fusion_contigs 1 ' => 95,
          'num genes matched < 2' => 182,
          ' ** passed ** ' => 79740,
          'num_hits: 5 != num_counted_on_fusion_contigs 2 ' => 2
        };
-writing fusion junction support info.
-outputting the spanning read info: /tmp/nxf.40GxZtQfZF/fi_workdir/BVT_FFPE_TRNA_bld_02_A23WKFTLT4_2.star.cSorted.dupsMarked.bam.fusion_spanning_info.
 - counting read alignments among fusion contigs.

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[26000]   -fusion SPANNING read extraction for scaff: AGPS--AC092640.1

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[855000]   -fusion SPANNING read extraction for scaff: DHRS2--GSTM2

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[2812000]   
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[2817000]   
[2818000]   
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[2820000]   
[2821000]   
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[2837000]   
[2838000]   
[2839000]   
[2840000]   
[2841000]   
[2842000]   
[2843000]   
[2844000]   -fusion SPANNING read extraction for scaff: FGFR3--TACC3

[1000]   -fusion SPANNING read extraction for scaff: GUCY1B2--NKAIN2

[1000]   
[2000]   
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[4000]   
[5000]   
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[9000]   
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[40000]   
[41000]   
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[66000]   
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[74000]   
[75000]   
[76000]   
[77000]   
[78000]   
[79000]   
[80000]   
[81000]   
[82000]   
[83000]   -fusion SPANNING read extraction for scaff: IL9R--WASH4P

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
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[8000]   
[9000]   
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[39000]   
[40000]   
[41000]   
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[44000]   
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[50000]   
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[61000]   
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[65000]   
[66000]   
[67000]   
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[71000]   
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[80000]   
[81000]   
[82000]   
[83000]   
[84000]   
[85000]   
[86000]   
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[88000]   
[89000]   
[90000]   
[91000]   
[92000]   
[93000]   
[94000]   
[95000]   
[96000]   
[97000]   -fusion SPANNING read extraction for scaff: IL9R--WASH6P

[1000]   -fusion SPANNING read extraction for scaff: LINC00381--NKAIN2

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
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[13000]   
[14000]   
[15000]   
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[30000]   
[31000]   
[32000]   
[33000]   
[34000]   
[35000]   
[36000]   
[37000]   
[38000]   
[39000]   -fusion SPANNING read extraction for scaff: PCDHA4--PCDHAC1

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
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[13000]   
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[25000]   
[26000]   
[27000]   
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[30000]   
[31000]   
[32000]   
[33000]   
[34000]   
[35000]   
[36000]   
[37000]   
[38000]   -fusion SPANNING read extraction for scaff: PCDHA4--PCDHAC2

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
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[30000]   
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[33000]   
[34000]   
[35000]   
[36000]   
[37000]   
[38000]   
[39000]   
[40000]   
[41000]   -fusion SPANNING read extraction for scaff: PCDHA4--PCDHA13

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   
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[8000]   
[9000]   
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[55000]   
[56000]   
[57000]   
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[59000]   
[60000]   
[61000]   
[62000]   
[63000]   
[64000]   
[65000]   
[66000]   
[67000]   
[68000]   
[69000]   
[70000]   
[71000]   
[72000]   
[73000]   
[74000]   
[75000]   
[76000]   
[77000]   
[78000]   
[79000]   
[80000]   
[81000]   
[82000]   
[83000]   
[84000]   -fusion SPANNING read extraction for scaff: STX16--NPEPL1

[1000]   
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[3000]   
[4000]   
[5000]   
[6000]   
[7000]   
[8000]   
[9000]   
[10000]   
[11000]   
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[14000]   
[15000]   
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[27000]   
[28000]   
[29000]   
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[31000]   
[32000]   
[33000]   -fusion SPANNING read extraction for scaff: TLK2--AL669831.1

[1000]   
[2000]   
[3000]   
[4000]   
[5000]   
[6000]   -fusion SPANNING read extraction for scaff: TLK2P1--AC110079.1

[1000]   
[2000]   
[3000]   
[4000]   
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[6000]   
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[8000]   
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[20000]   
[21000]   
[22000]   
[23000]   
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[25000]   
[26000]   
[27000]   -fusion SPANNING read extraction for scaff: TVP23C--CDRT4

[1000]   
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[4000]   
[5000]   
[6000]   
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[8000]   
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[41000]   
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[48000]   
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[50000]   
[51000]   
[52000]   
[53000]   
[54000]   
[55000]   
[56000]   -fusion SPANNING read extraction for scaff: ZNF33B--LINC01518
-filtered reads reasons: $VAR1 = {
          'seq similar region alignment' => 560,
          'lacks exon overlap' => 15122
        };
EM: Starting log likelihood: -36634.169570
EM: Round [1] log likelihood: -36581.016786
EM: Round [2] log likelihood: -36562.081795
EM: Round [3] log likelihood: -36550.405491
EM: Round [4] log likelihood: -36542.786338
EM: Round [5] log likelihood: -36537.696660
EM: Round [6] log likelihood: -36534.246315
EM: Round [7] log likelihood: -36531.881827
EM: Round [8] log likelihood: -36530.247588
EM: Round [9] log likelihood: -36529.110144
EM: Round [10] log likelihood: -36528.313789
EM: Round [11] log likelihood: -36527.753398
EM: Round [12] log likelihood: -36527.357301
EM: Round [13] log likelihood: -36527.076233
EM: Round [14] log likelihood: -36526.876096
EM: Round [15] log likelihood: -36526.733147
EM: Round [16] log likelihood: -36526.630764
EM: Round [17] log likelihood: -36526.557255
EM: Round [18] log likelihood: -36526.504361
EM: Round [19] log likelihood: -36526.466228
EM: Round [20] log likelihood: -36526.438687
EM: Round [21] log likelihood: -36526.418767
EM: Round [22] log likelihood: -36526.404338
EM: Round [23] log likelihood: -36526.393874
EM: Round [24] log likelihood: -36526.386276
EM: Round [25] log likelihood: -36526.380755
EM: Round [26] log likelihood: -36526.376739
EM: Round [27] log likelihood: -36526.373816
EM: Round [28] log likelihood: -36526.371686
EM: Round [29] log likelihood: -36526.370134
EM: Round [30] log likelihood: -36526.369001
EM: Round [31] log likelihood: -36526.368174
EM: Round [32] log likelihood: -36526.367570
EM: Round [33] log likelihood: -36526.367129
EM: Round [34] log likelihood: -36526.366806
EM: Round [35] log likelihood: -36526.366570
EM: Round [36] log likelihood: -36526.366397
EM: Round [37] log likelihood: -36526.366270
EM: Round [38] log likelihood: -36526.366176
EM: Stopping iterations at round 38 due to insufficient improvement in likelihood.
[bam_sort_core] merging from 0 files and 8 in-memory blocks...
-extracting read coordinates from /tmp/nxf.40GxZtQfZF/BVT_FFPE_TRNA_bld_02_A23WKFTLT4_2.consolidated.bam into /tmp/nxf.40GxZtQfZF/BVT_FFPE_TRNA_bld_02_A23WKFTLT4_2.consolidated.bam.read_coords

CMD: touch /tmp/nxf.40GxZtQfZF/BVT_FFPE_TRNA_bld_02_A23WKFTLT4_2.consolidated.bam.read_coords.ok
CMD: /usr/bin/sort --parallel=1 -S10G -T . -k1,1 -k2,2 -k4,4n /tmp/nxf.40GxZtQfZF/BVT_FFPE_TRNA_bld_02_A23WKFTLT4_2.consolidated.bam.read_coords > /tmp/nxf.40GxZtQfZF/BVT_FFPE_TRNA_bld_02_A23WKFTLT4_2.consolidated.bam.read_coords.sort_by_readname
CMD: /usr/bin/sort --parallel=1 -S10G -T . -k1,1 -k3,3n /tmp/nxf.40GxZtQfZF/BVT_FFPE_TRNA_bld_02_A23WKFTLT4_2.consolidated.bam.frag_coords > /tmp/nxf.40GxZtQfZF/BVT_FFPE_TRNA_bld_02_A23WKFTLT4_2.consolidated.bam.frag_coords.coord_sorted
CMD: /usr/local/src/STAR-Fusion/FusionInspector/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.40GxZtQfZF/fi_workdir/BVT_FFPE_TRNA_bld_02_A23WKFTLT4_2.fusion_preds.coalesced.summary.EMadj.min_frag_thresh.wSpliceInfo --genome_lib_dir ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionInspector/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.40GxZtQfZF/fi_workdir/BVT_FFPE_TRNA_bld_02_A23WKFTLT4_2.fusion_preds.coalesced.summary.EMadj.min_frag_thresh.wSpliceInfo.post_blast_filter  --genome_lib_dir ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 50 
CMD: cp /tmp/nxf.40GxZtQfZF/fi_workdir/BVT_FFPE_TRNA_bld_02_A23WKFTLT4_2.fusion_preds.coalesced.summary.EMadj.min_frag_thresh.wSpliceInfo.post_blast_filter.post_promisc_filter /tmp/nxf.40GxZtQfZF/BVT_FFPE_TRNA_bld_02_A23WKFTLT4_2.post_blast_and_promiscuity_filter
-done, see /tmp/nxf.40GxZtQfZF/BVT_FFPE_TRNA_bld_02_A23WKFTLT4_2.post_blast_and_promiscuity_filter.annot_filter.pass
EM: Starting log likelihood: -32756.705303
EM: Round [1] log likelihood: -32752.239641
EM: Round [2] log likelihood: -32751.700506
EM: Round [3] log likelihood: -32751.650602
EM: Round [4] log likelihood: -32751.646629
EM: Round [5] log likelihood: -32751.646329
EM: Round [6] log likelihood: -32751.646307
EM: Stopping iterations at round 6 due to insufficient improvement in likelihood.
-total frags in /tmp/nxf.40GxZtQfZF/BVT_FFPE_TRNA_bld_02_A23WKFTLT4_2_1.fastp.fastq.gz: 291032533
Warning - not locating file: /tmp/nxf.40GxZtQfZF/BVT_FFPE_TRNA_bld_02_A23WKFTLT4_2.gmap_trinity_GG.fusions.gff3.bed
WARNING, no entry stored in dbm for [ENSG00000234769.7]
WARNING, no entry stored in dbm for [ENSG00000234769.7]
WARNING, no entry stored in dbm for [ENSG00000234769.7]
WARNING, no entry stored in dbm for [ENSG00000234769.7]
WARNING, no entry stored in dbm for [ENSG00000234769.7]
WARNING, no entry stored in dbm for [ENSG00000234769.7]
WARNING, no entry stored in dbm for [ENSG00000226240.2]
WARNING, no entry stored in dbm for [ENSG00000226049.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000226049.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000228327.3]
WARNING, no entry stored in dbm for [ENSG00000123201.14]
WARNING, no entry stored in dbm for [ENSG00000123201.14]
WARNING, no entry stored in dbm for [ENSG00000287149.1]
WARNING, no entry stored in dbm for [ENSG00000233515.2]
ls: cannot access 'IGV_inputs': No such file or directory