Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/80/ba9f438a0b00a92d31690cfa19cf88/BVT_FFPE_TRNA_bld_01_A23WKFTLT4_3.arriba.fusions.filtered_pass_only.tsv
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/09/616835b0502bda5b09ec6a0966a118/BVT_FFPE_TRNA_bld_01_A23WKFTLT4_3.starfusion.starfusion.fusion_predictions.filtered_pass_only.tsv
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/stage-13dfb8f7-c999-4ef0-9260-22ba79cf647d/12/67abb88ebf714ffff6a1edb5a607f5/dummy_file_fusioncatcher.txt
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c0/7de3c8893e5beba97898608d3f5d40/.command.sh
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c0/7de3c8893e5beba97898608d3f5d40/.command.run
Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/fusion_report_db
==> STAGING COMPLETE (6 inputs)
[32mRunning application...[0m
FGFR3--TACC3
starfusion
arriba
PTPRK--RSPO3
starfusion
arriba
PPME1--TCF7L2
starfusion
arriba
RPN2--PTPRT
arriba
0%| | 0/4 [00:00<?, ?it/s]
Processing FGFR3--TACC3: 0%| | 0/4 [00:00<?, ?it/s]
Processing FGFR3--TACC3: 25%|██▌ | 1/4 [00:00<00:00, 8.62it/s]
Processing PTPRK--RSPO3: 25%|██▌ | 1/4 [00:00<00:00, 8.62it/s]
Processing PTPRK--RSPO3: 50%|█████ | 2/4 [00:00<00:00, 8.99it/s]
Processing PPME1--TCF7L2: 50%|█████ | 2/4 [00:00<00:00, 8.99it/s]
Processing PPME1--TCF7L2: 75%|███████▌ | 3/4 [00:00<00:00, 9.15it/s]
Processing RPN2--PTPRT: 75%|███████▌ | 3/4 [00:00<00:00, 9.15it/s]
Processing RPN2--PTPRT: 100%|██████████| 4/4 [00:00<00:00, 9.23it/s]
Processing RPN2--PTPRT: 100%|██████████| 4/4 [00:00<00:00, 9.13it/s]
cat: fusion_report_db/DB-timestamp.txt: No such file or directory