.command.log - Workdir - NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_READDISTRIBUTION (BVT_FFPE_TRNA_bld_01_A23WKFTLT4_1)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fd/2914fc8077503694f47cd9b19845bc/.command.log
Size: 953 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_READDISTRIBUTION (BVT_FFPE_TRNA_bld_01_A23WKFTLT4_1)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e4/6802e5b20cb9d64d80ab801507ee46/BVT_FFPE_TRNA_bld_01_A23WKFTLT4_1.Aligned.sortedByCoord.out.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/17/0a96b55d84d45d8460e84d472820bc/ref_annot.bed
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fd/2914fc8077503694f47cd9b19845bc/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fd/2914fc8077503694f47cd9b19845bc/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ca/a60abc8bba469f1210d001de2a9373/BVT_FFPE_TRNA_bld_01_A23WKFTLT4_1.Aligned.sortedByCoord.out.bam
==> STAGING COMPLETE (5 inputs)

processing ref_annot.bed ... Done
[W::hts_idx_load3] The index file is older than the data file: BVT_FFPE_TRNA_bld_01_A23WKFTLT4_1.Aligned.sortedByCoord.out.bam.bai
processing BVT_FFPE_TRNA_bld_01_A23WKFTLT4_1.Aligned.sortedByCoord.out.bam ... Finished