Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/18/c3821fe2360f31ae4fbc21298a4630/BVT_FFPE_TRNA_crv_02_A23WKFTLT4_2.Chimeric.out.junction
Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/94/71fd3582469cbf5b177f25b1249e60/.command.sh
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/94/71fd3582469cbf5b177f25b1249e60/.command.run
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/13/59374bc759580fae1cfde7d6982615/BVT_FFPE_TRNA_crv_02_A23WKFTLT4_2_1.fastp.fastq.gz
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/13/59374bc759580fae1cfde7d6982615/BVT_FFPE_TRNA_crv_02_A23WKFTLT4_2_2.fastp.fastq.gz
==> STAGING COMPLETE (6 inputs)
-ctat genome lib [/tmp/nxf.eitf7Jml64/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.eitf7Jml64/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.eitf7Jml64/./star-fusion.preliminary
-sample contains 61276447 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.eitf7Jml64/ctat_genome_lib_build_dir -J /tmp/nxf.eitf7Jml64/BVT_FFPE_TRNA_crv_02_A23WKFTLT4_2.Chimeric.out.junction -O /tmp/nxf.eitf7Jml64/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4
-parsing fusion evidence: /tmp/nxf.eitf7Jml64/BVT_FFPE_TRNA_crv_02_A23WKFTLT4_2.Chimeric.out.junction
-building interval tree based on /tmp/nxf.eitf7Jml64/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.05 min).
-mapping reads to genes
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[970000], rate=70460.05/min -building interval tree based on /tmp/nxf.eitf7Jml64/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
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[980000], rate=60369.61/min -building interval tree based on /tmp/nxf.eitf7Jml64/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
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[980000], rate=60681.11/min -building interval tree based on /tmp/nxf.eitf7Jml64/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
[10000], rate=120000.00/min
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[990000], rate=48019.40/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.eitf7Jml64/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.eitf7Jml64/ctat_genome_lib_build_dir --filt_file /tmp/nxf.eitf7Jml64/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.eitf7Jml64/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-parsing /tmp/nxf.eitf7Jml64/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.
6000000.00 reads per min processed...
4000000.00 reads per min processed...
3600000.00 reads per min processed...
3428571.43 reads per min processed...
3333333.33 reads per min processed...
3272727.27 reads per min processed...
3230769.23 reads per min processed...
3200000.00 reads per min processed...
3176470.59 reads per min processed...
3157894.74 reads per min processed...
3142857.14 reads per min processed...
3130434.78 reads per min processed...
3120000.00 reads per min processed...
3111111.11 reads per min processed...
3103448.28 reads per min processed...
3096774.19 reads per min processed...
3090909.09 reads per min processed...
3085714.29 reads per min processed...
3081081.08 reads per min processed...
3157894.74 reads per min processed...
3150000.00 reads per min processed...
3219512.20 reads per min processed...
3209302.33 reads per min processed...
3200000.00 reads per min processed...
3260869.57 reads per min processed...
3250000.00 reads per min processed...
3240000.00 reads per min processed...
3294117.65 reads per min processed...
3283018.87 reads per min processed...
3272727.27 reads per min processed...
3321428.57 reads per min processed...
3310344.83 reads per min processed...
3300000.00 reads per min processed...
3290322.58 reads per min processed...
done.
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.eitf7Jml64/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.eitf7Jml64/./star-fusion.preliminary/star-fusion
-parsing fusion evidence: /tmp/nxf.eitf7Jml64/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.eitf7Jml64/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.eitf7Jml64/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.eitf7Jml64/BVT_FFPE_TRNA_crv_02_A23WKFTLT4_2.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.eitf7Jml64/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.eitf7Jml64/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.eitf7Jml64/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -78796.539876
EM: Round [1] log likelihood: -78745.703669
EM: Round [2] log likelihood: -78726.441186
EM: Round [3] log likelihood: -78716.929666
EM: Round [4] log likelihood: -78711.820732
EM: Round [5] log likelihood: -78708.949747
EM: Round [6] log likelihood: -78707.266111
EM: Round [7] log likelihood: -78706.234425
EM: Round [8] log likelihood: -78705.574921
EM: Round [9] log likelihood: -78705.136853
EM: Round [10] log likelihood: -78704.835974
EM: Round [11] log likelihood: -78704.623351
EM: Round [12] log likelihood: -78704.469469
EM: Round [13] log likelihood: -78704.355877
EM: Round [14] log likelihood: -78704.270648
EM: Round [15] log likelihood: -78704.205835
EM: Round [16] log likelihood: -78704.155998
EM: Round [17] log likelihood: -78704.117321
EM: Round [18] log likelihood: -78704.087072
EM: Round [19] log likelihood: -78704.063260
EM: Round [20] log likelihood: -78704.044409
EM: Round [21] log likelihood: -78704.029415
EM: Round [22] log likelihood: -78704.017439
EM: Round [23] log likelihood: -78704.007837
EM: Round [24] log likelihood: -78704.000115
EM: Round [25] log likelihood: -78703.993885
EM: Round [26] log likelihood: -78703.988847
EM: Round [27] log likelihood: -78703.984761
EM: Round [28] log likelihood: -78703.981442
EM: Round [29] log likelihood: -78703.978738
EM: Round [30] log likelihood: -78703.976533
EM: Round [31] log likelihood: -78703.974730
EM: Round [32] log likelihood: -78703.973254
EM: Round [33] log likelihood: -78703.972043
EM: Round [34] log likelihood: -78703.971048
EM: Round [35] log likelihood: -78703.970229
EM: Round [36] log likelihood: -78703.969555
EM: Round [37] log likelihood: -78703.968998
EM: Round [38] log likelihood: -78703.968538
EM: Round [39] log likelihood: -78703.968157
EM: Round [40] log likelihood: -78703.967842
EM: Round [41] log likelihood: -78703.967580
EM: Round [42] log likelihood: -78703.967362
EM: Round [43] log likelihood: -78703.967182
EM: Round [44] log likelihood: -78703.967031
EM: Round [45] log likelihood: -78703.966905
EM: Round [46] log likelihood: -78703.966800
EM: Round [47] log likelihood: -78703.966713
EM: Stopping iterations at round 47 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -78687.403095
EM: Round [1] log likelihood: -78649.944432
EM: Round [2] log likelihood: -78636.292902
EM: Round [3] log likelihood: -78629.760472
EM: Round [4] log likelihood: -78626.315909
EM: Round [5] log likelihood: -78624.388671
EM: Round [6] log likelihood: -78623.249097
EM: Round [7] log likelihood: -78622.538609
EM: Round [8] log likelihood: -78622.074272
EM: Round [9] log likelihood: -78621.758532
EM: Round [10] log likelihood: -78621.536757
EM: Round [11] log likelihood: -78621.376846
EM: Round [12] log likelihood: -78621.259083
EM: Round [13] log likelihood: -78621.170874
EM: Round [14] log likelihood: -78621.103889
EM: Round [15] log likelihood: -78621.052448
EM: Round [16] log likelihood: -78621.012581
EM: Round [17] log likelihood: -78620.981448
EM: Round [18] log likelihood: -78620.956979
EM: Round [19] log likelihood: -78620.937643
EM: Round [20] log likelihood: -78620.922292
EM: Round [21] log likelihood: -78620.910053
EM: Round [22] log likelihood: -78620.900262
EM: Round [23] log likelihood: -78620.892402
EM: Round [24] log likelihood: -78620.886075
EM: Round [25] log likelihood: -78620.880967
EM: Round [26] log likelihood: -78620.876834
EM: Round [27] log likelihood: -78620.873481
EM: Round [28] log likelihood: -78620.870756
EM: Round [29] log likelihood: -78620.868537
EM: Round [30] log likelihood: -78620.866725
EM: Round [31] log likelihood: -78620.865243
EM: Round [32] log likelihood: -78620.864029
EM: Round [33] log likelihood: -78620.863033
EM: Round [34] log likelihood: -78620.862214
EM: Round [35] log likelihood: -78620.861540
EM: Round [36] log likelihood: -78620.860983
EM: Round [37] log likelihood: -78620.860524
EM: Round [38] log likelihood: -78620.860143
EM: Round [39] log likelihood: -78620.859828
EM: Round [40] log likelihood: -78620.859567
EM: Round [41] log likelihood: -78620.859349
EM: Round [42] log likelihood: -78620.859168
EM: Round [43] log likelihood: -78620.859018
EM: Round [44] log likelihood: -78620.858892
EM: Round [45] log likelihood: -78620.858786
EM: Round [46] log likelihood: -78620.858698
EM: Stopping iterations at round 46 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.eitf7Jml64/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.eitf7Jml64/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.eitf7Jml64/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.eitf7Jml64/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.eitf7Jml64/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.eitf7Jml64/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.eitf7Jml64/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20
CMD: cp /tmp/nxf.eitf7Jml64/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.eitf7Jml64/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.eitf7Jml64/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.eitf7Jml64/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.eitf7Jml64/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.eitf7Jml64/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.eitf7Jml64/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 61276447 > /tmp/nxf.eitf7Jml64/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.eitf7Jml64/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.eitf7Jml64/ctat_genome_lib_build_dir > /tmp/nxf.eitf7Jml64/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.eitf7Jml64/ctat_genome_lib_build_dir --annotate /tmp/nxf.eitf7Jml64/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.eitf7Jml64/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.eitf7Jml64/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.eitf7Jml64/ctat_genome_lib_build_dir
-done, see /tmp/nxf.eitf7Jml64/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.eitf7Jml64/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.eitf7Jml64/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 588, filtered: 5682)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.eitf7Jml64/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.eitf7Jml64/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.eitf7Jml64/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000224086.6]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000224086.6]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000181126.13]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000259275.4]
WARNING, no entry stored in dbm for [ENSG00000224550.1]
WARNING, no entry stored in dbm for [ENSG00000233031.1]
WARNING, no entry stored in dbm for [ENSG00000230356.1]
WARNING, no entry stored in dbm for [ENSG00000198496.12]
WARNING, no entry stored in dbm for [ENSG00000262879.6]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000213708.6]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000213708.6]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000213708.6]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000213708.6]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000249267.7]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000249267.7]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000249267.7]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000249267.7]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000279317.2]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000286830.1]
WARNING, no entry stored in dbm for [ENSG00000247679.3]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000250726.1]
WARNING, no entry stored in dbm for [ENSG00000231731.7]
WARNING, no entry stored in dbm for [ENSG00000259663.2]
WARNING, no entry stored in dbm for [ENSG00000264578.1]
WARNING, no entry stored in dbm for [ENSG00000215339.3]
WARNING, no entry stored in dbm for [ENSG00000234493.4]
WARNING, no entry stored in dbm for [ENSG00000279217.1]
WARNING, no entry stored in dbm for [ENSG00000232346.1]
WARNING, no entry stored in dbm for [ENSG00000248459.1]
WARNING, no entry stored in dbm for [ENSG00000228775.8]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000213864.3]
WARNING, no entry stored in dbm for [ENSG00000245532.9]
WARNING, no entry stored in dbm for [ENSG00000214559.3]
WARNING, no entry stored in dbm for [ENSG00000240549.2]
WARNING, no entry stored in dbm for [ENSG00000223126.1]
WARNING, no entry stored in dbm for [ENSG00000254274.1]
WARNING, no entry stored in dbm for [ENSG00000248578.1]
WARNING, no entry stored in dbm for [ENSG00000128438.10]
WARNING, no entry stored in dbm for [ENSG00000234772.2]
WARNING, no entry stored in dbm for [ENSG00000228319.1]
WARNING, no entry stored in dbm for [ENSG00000205853.12]
WARNING, no entry stored in dbm for [ENSG00000232803.1]
WARNING, no entry stored in dbm for [ENSG00000215790.8]
WARNING, no entry stored in dbm for [ENSG00000249297.2]
WARNING, no entry stored in dbm for [ENSG00000135502.19]
WARNING, no entry stored in dbm for [ENSG00000232021.7]
WARNING, no entry stored in dbm for [ENSG00000230630.5]
WARNING, no entry stored in dbm for [ENSG00000225383.8]
WARNING, no entry stored in dbm for [ENSG00000237307.2]
WARNING, no entry stored in dbm for [ENSG00000236477.1]
WARNING, no entry stored in dbm for [ENSG00000242951.1]
WARNING, no entry stored in dbm for [ENSG00000240983.1]
WARNING, no entry stored in dbm for [ENSG00000243024.6]
WARNING, no entry stored in dbm for [ENSG00000259368.1]
WARNING, no entry stored in dbm for [ENSG00000240519.1]
WARNING, no entry stored in dbm for [ENSG00000257074.3]
WARNING, no entry stored in dbm for [ENSG00000241030.1]
WARNING, no entry stored in dbm for [ENSG00000213178.3]
WARNING, no entry stored in dbm for [ENSG00000218300.1]
WARNING, no entry stored in dbm for [ENSG00000183911.7]
WARNING, no entry stored in dbm for [ENSG00000239272.1]
WARNING, no entry stored in dbm for [ENSG00000240870.2]
WARNING, no entry stored in dbm for [ENSG00000218227.3]
WARNING, no entry stored in dbm for [ENSG00000230559.1]
WARNING, no entry stored in dbm for [ENSG00000215030.5]
WARNING, no entry stored in dbm for [ENSG00000232463.1]
WARNING, no entry stored in dbm for [ENSG00000282933.2]
WARNING, no entry stored in dbm for [ENSG00000256597.3]
WARNING, no entry stored in dbm for [ENSG00000248927.1]
WARNING, no entry stored in dbm for [ENSG00000225279.2]
WARNING, no entry stored in dbm for [ENSG00000234748.1]
WARNING, no entry stored in dbm for [ENSG00000249072.1]
WARNING, no entry stored in dbm for [ENSG00000278879.1]
WARNING, no entry stored in dbm for [ENSG00000267226.2]
WARNING, no entry stored in dbm for [ENSG00000176904.3]
WARNING, no entry stored in dbm for [ENSG00000247556.6]
WARNING, no entry stored in dbm for [ENSG00000236526.1]
WARNING, no entry stored in dbm for [ENSG00000245532.9]
WARNING, no entry stored in dbm for [ENSG00000242978.1]
WARNING, no entry stored in dbm for [ENSG00000227098.2]
WARNING, no entry stored in dbm for [ENSG00000236051.7]
WARNING, no entry stored in dbm for [ENSG00000259363.6]
WARNING, no entry stored in dbm for [ENSG00000198786.2]
WARNING, no entry stored in dbm for [ENSG00000205414.1]
WARNING, no entry stored in dbm for [ENSG00000212100.2]
WARNING, no entry stored in dbm for [ENSG00000261390.6]
WARNING, no entry stored in dbm for [ENSG00000270540.1]
WARNING, no entry stored in dbm for [ENSG00000213904.9]
WARNING, no entry stored in dbm for [ENSG00000248238.2]
WARNING, no entry stored in dbm for [ENSG00000237248.5]
WARNING, no entry stored in dbm for [ENSG00000235703.6]
WARNING, no entry stored in dbm for [ENSG00000261303.6]
WARNING, no entry stored in dbm for [ENSG00000249592.6]
WARNING, no entry stored in dbm for [ENSG00000233930.4]
WARNING, no entry stored in dbm for [ENSG00000230863.3]
WARNING, no entry stored in dbm for [ENSG00000249184.2]
WARNING, no entry stored in dbm for [ENSG00000287376.1]
WARNING, no entry stored in dbm for [ENSG00000227018.1]
WARNING, no entry stored in dbm for [ENSG00000227195.11]
WARNING, no entry stored in dbm for [ENSG00000206341.7]
WARNING, no entry stored in dbm for [ENSG00000225851.1]
WARNING, no entry stored in dbm for [ENSG00000212978.6]
WARNING, no entry stored in dbm for [ENSG00000287219.1]
WARNING, no entry stored in dbm for [ENSG00000206417.8]
WARNING, no entry stored in dbm for [ENSG00000287167.1]
WARNING, no entry stored in dbm for [ENSG00000227038.3]
WARNING, no entry stored in dbm for [ENSG00000229180.7]
WARNING, no entry stored in dbm for [ENSG00000229180.7]
WARNING, no entry stored in dbm for [ENSG00000236526.1]
WARNING, no entry stored in dbm for [ENSG00000223215.1]
WARNING, no entry stored in dbm for [ENSG00000182814.7]
WARNING, no entry stored in dbm for [ENSG00000227009.1]
WARNING, no entry stored in dbm for [ENSG00000261407.2]
WARNING, no entry stored in dbm for [ENSG00000234983.1]
WARNING, no entry stored in dbm for [ENSG00000244097.1]
WARNING, no entry stored in dbm for [ENSG00000275340.1]
WARNING, no entry stored in dbm for [ENSG00000223566.1]
WARNING, no entry stored in dbm for [ENSG00000204623.9]
WARNING, no entry stored in dbm for [ENSG00000255490.1]
WARNING, no entry stored in dbm for [ENSG00000283907.1]
WARNING, no entry stored in dbm for [ENSG00000263883.1]
WARNING, no entry stored in dbm for [ENSG00000186704.9]
WARNING, no entry stored in dbm for [ENSG00000229358.3]
WARNING, no entry stored in dbm for [ENSG00000273149.1]
WARNING, no entry stored in dbm for [ENSG00000180525.13]
WARNING, no entry stored in dbm for [ENSG00000180525.13]
WARNING, no entry stored in dbm for [ENSG00000250686.2]
WARNING, no entry stored in dbm for [ENSG00000230937.12]
WARNING, no entry stored in dbm for [ENSG00000286909.1]
WARNING, no entry stored in dbm for [ENSG00000236526.1]
WARNING, no entry stored in dbm for [ENSG00000235323.2]
WARNING, no entry stored in dbm for [ENSG00000230630.5]
WARNING, no entry stored in dbm for [ENSG00000226312.7]
WARNING, no entry stored in dbm for [ENSG00000228290.7]
WARNING, no entry stored in dbm for [ENSG00000236526.1]
WARNING, no entry stored in dbm for [ENSG00000244621.1]
WARNING, no entry stored in dbm for [ENSG00000206159.11]
WARNING, no entry stored in dbm for [ENSG00000249669.10]
WARNING, no entry stored in dbm for [ENSG00000259375.1]
WARNING, no entry stored in dbm for [ENSG00000188511.12]
WARNING, no entry stored in dbm for [ENSG00000274220.1]
WARNING, no entry stored in dbm for [ENSG00000282572.2]
WARNING, no entry stored in dbm for [ENSG00000277544.1]
WARNING, no entry stored in dbm for [ENSG00000205853.12]
WARNING, no entry stored in dbm for [ENSG00000255482.1]
WARNING, no entry stored in dbm for [ENSG00000230006.7]
WARNING, no entry stored in dbm for [ENSG00000223703.1]
WARNING, no entry stored in dbm for [ENSG00000283696.1]
WARNING, no entry stored in dbm for [ENSG00000232295.7]
WARNING, no entry stored in dbm for [ENSG00000243797.6]
WARNING, no entry stored in dbm for [ENSG00000170161.7]
WARNING, no entry stored in dbm for [ENSG00000285103.2]
WARNING, no entry stored in dbm for [ENSG00000234117.2]
WARNING, no entry stored in dbm for [ENSG00000227619.3]
WARNING, no entry stored in dbm for [ENSG00000258751.2]
WARNING, no entry stored in dbm for [ENSG00000220105.2]
WARNING, no entry stored in dbm for [ENSG00000233558.1]
WARNING, no entry stored in dbm for [ENSG00000259133.5]
WARNING, no entry stored in dbm for [ENSG00000273149.1]
WARNING, no entry stored in dbm for [ENSG00000237596.7]
WARNING, no entry stored in dbm for [ENSG00000217239.3]
WARNING, no entry stored in dbm for [ENSG00000241282.1]
WARNING, no entry stored in dbm for [ENSG00000229409.1]
WARNING, no entry stored in dbm for [ENSG00000233079.3]
WARNING, no entry stored in dbm for [ENSG00000286128.1]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000278791.1]
WARNING, no entry stored in dbm for [ENSG00000278791.1]
WARNING, no entry stored in dbm for [ENSG00000253483.1]
WARNING, no entry stored in dbm for [ENSG00000251314.2]
WARNING, no entry stored in dbm for [ENSG00000265218.1]
WARNING, no entry stored in dbm for [ENSG00000272134.1]
WARNING, no entry stored in dbm for [ENSG00000224521.2]
WARNING, no entry stored in dbm for [ENSG00000249604.1]
WARNING, no entry stored in dbm for [ENSG00000265936.1]
WARNING, no entry stored in dbm for [ENSG00000214259.3]
WARNING, no entry stored in dbm for [ENSG00000264151.6]
WARNING, no entry stored in dbm for [ENSG00000260569.2]
WARNING, no entry stored in dbm for [ENSG00000261848.5]
WARNING, no entry stored in dbm for [ENSG00000237614.3]
WARNING, no entry stored in dbm for [ENSG00000254559.1]
WARNING, no entry stored in dbm for [ENSG00000257337.7]
WARNING, no entry stored in dbm for [ENSG00000287431.1]
WARNING, no entry stored in dbm for [ENSG00000223628.2]
WARNING, no entry stored in dbm for [ENSG00000241846.1]
WARNING, no entry stored in dbm for [ENSG00000253907.1]
WARNING, no entry stored in dbm for [ENSG00000269032.1]
WARNING, no entry stored in dbm for [ENSG00000223508.5]
WARNING, no entry stored in dbm for [ENSG00000228363.2]
WARNING, no entry stored in dbm for [ENSG00000236478.2]
WARNING, no entry stored in dbm for [ENSG00000241281.1]
WARNING, no entry stored in dbm for [ENSG00000250481.2]
WARNING, no entry stored in dbm for [ENSG00000267815.1]
WARNING, no entry stored in dbm for [ENSG00000273489.1]
WARNING, no entry stored in dbm for [ENSG00000272121.1]
WARNING, no entry stored in dbm for [ENSG00000250770.3]
WARNING, no entry stored in dbm for [ENSG00000213237.4]
WARNING, no entry stored in dbm for [ENSG00000241057.2]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000279159.1]
* STAR-Fusion complete. See output: /tmp/nxf.eitf7Jml64/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)