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659_dc8-T1-TRNA-1_A23MVY2LT4_1.FusionInspector.fusions.abridged.tsv
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0014_0015/A23MVY2LT4/nfcore_rnafusion__73d51683--20260607-225254/fusioninspector/659_dc8-T1-TRNA-1_A23MVY2LT4_1.FusionInspector.fusions.abridged.tsv
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dev_rna_exp0014_exp0015-73d51683
Published
Jun 08, 2026 5:05 AM

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#FusionName JunctionReadCount SpanningFragCount est_J est_S LeftGene LeftLocalBreakpoint LeftBreakpoint RightGene RightLocalBreakpoint RightBreakpoint SpliceType LargeAnchorSupport NumCounterFusionLeft NumCounterFusionRight FAR_left FAR_right LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy FFPM microh_brkpt_dist num_microh_near_brkpt
SND1--BRAF 1445 30 1445.00 28.04 SND1^ENSG00000197157.11 20479 chr7:127904819:+ BRAF^ENSG00000157764.14 55981 chr7:140787584:- ONLY_REF_SPLICE YES 2402 769 0.61 1.92 GT 1.9329 AG 1.9329 4.9883 2172 0
SND1--BRAF 52 31 51.05 1.71 SND1^ENSG00000197157.11 22748 chr7:127929329:+ BRAF^ENSG00000157764.14 49278 chr7:140808995:- ONLY_REF_SPLICE YES 2307 1040 0.04 0.08 GT 1.7819 AG 1.9656 0.1787 2200 0
SND1--BRAF 17 30 17.00 0.33 SND1^ENSG00000197157.11 22748 chr7:127929329:+ BRAF^ENSG00000157764.14 54821 chr7:140794467:- ONLY_REF_SPLICE YES 2307 1123 0.02 0.04 GT 1.7819 AG 1.7465 0.0587 2389 0
SND1--BRAF 14 23 14.00 0.21 SND1^ENSG00000197157.11 20474 chr7:127904814:+ BRAF^ENSG00000157764.14 55978 chr7:140787587:- INCL_NON_REF_SPLICE YES 2602 711 0.01 0.05 CT 1.8062 TG 1.8256 0.0481 2175 0
SND1--BRAF 8 31 8.00 0.27 SND1^ENSG00000197157.11 22748 chr7:127929329:+ BRAF^ENSG00000157764.14 44609 chr7:140834703:- ONLY_REF_SPLICE YES 2307 1521 0.02 0.03 GT 1.7819 AG 1.5656 0.028 1285 0
SND1--BRAF 4 31 4.00 0.13 SND1^ENSG00000197157.11 24933 chr7:127991025:+ BRAF^ENSG00000157764.14 51429 chr7:140801445:- INCL_NON_REF_SPLICE YES 2696 1155 0.01 0.03 TT 1.9329 AG 1.8892 0.0139 1668 0
SND1--BRAF 3 31 3.00 0.10 SND1^ENSG00000197157.11 37120 chr7:128092117:+ BRAF^ENSG00000157764.14 44521 chr7:140834791:- INCL_NON_REF_SPLICE YES 2176 1307 0.02 0.03 AG 1.5656 CT 1.4256 0.0105 361 0
SND1--BRAF 2 31 2.00 0.07 SND1^ENSG00000197157.11 22748 chr7:127929329:+ BRAF^ENSG00000157764.14 51314 chr7:140801560:- ONLY_REF_SPLICE YES 2307 1099 0.01 0.03 GT 1.7819 AG 1.8892 0.007 1724 0
SND1--BRAF 1 31 1.00 0.03 SND1^ENSG00000197157.11 22748 chr7:127929329:+ BRAF^ENSG00000157764.14 44440 chr7:140834872:- ONLY_REF_SPLICE YES 2307 988 0.01 0.03 GT 1.7819 AG 1.9219 0.0035 1232 0
SND1--BRAF 1 31 1.00 0.03 SND1^ENSG00000197157.11 24964 chr7:127991056:+ BRAF^ENSG00000157764.14 49278 chr7:140808995:- ONLY_REF_SPLICE YES 2729 1040 0.01 0.03 GT 1.8295 AG 1.9656 0.0035 1260 0
SND1--BRAF 1 31 1.00 0.03 SND1^ENSG00000197157.11 30032 chr7:128074690:+ BRAF^ENSG00000157764.14 44609 chr7:140834703:- ONLY_REF_SPLICE YES 3181 1521 0.01 0.02 GT 1.2310 AG 1.5656 0.0035 1268 0
SND1--BRAF 1 31 1.00 0.03 SND1^ENSG00000197157.11 24964 chr7:127991056:+ BRAF^ENSG00000157764.14 44609 chr7:140834703:- ONLY_REF_SPLICE YES 2729 1521 0.01 0.02 GT 1.8295 AG 1.5656 0.0035 1109 0
SND1--BRAF 3 0 3.00 0.00 SND1^ENSG00000197157.11 13393 chr7:127707647:+ BRAF^ENSG00000157764.14 62469 chr7:140778075:- ONLY_REF_SPLICE YES 4386 1479 0.00 0.00 GT 1.9656 AG 1.7465 0.0102 2321 0
SND1--BRAF 1 2 1.00 0.00 SND1^ENSG00000197157.11 20479 chr7:127904819:+ BRAF^ENSG00000157764.14 59582 chr7:140781693:- ONLY_REF_SPLICE YES 2402 1771 0.00 0.00 GT 1.9329 AG 1.8295 0.0034 1425 0
BRAF--SND1 1025 15 1024.95 14.56 BRAF^ENSG00000157764.14 15368 chr7:140794308:- SND1^ENSG00000197157.11 71688 chr7:127929188:+ ONLY_REF_SPLICE YES 966 2372 1.08 0.44 GT 1.8892 AG 1.6402 3.5202 2595 0
BRAF--SND1 15 15 15.00 0.21 BRAF^ENSG00000157764.14 15368 chr7:140794308:- SND1^ENSG00000197157.11 70561 chr7:127928060:+ ONLY_REF_SPLICE YES 966 2150 0.03 0.01 GT 1.8892 AG 1.8892 0.0515 3273 0
BRAF--SND1 5 15 5.00 0.07 BRAF^ENSG00000157764.14 34939 chr7:140734617:- SND1^ENSG00000197157.11 65794 chr7:127807484:+ ONLY_REF_SPLICE NO 1070 3590 0.02 0.01 GT 1.6402 AG 1.3753 0.0171 1075 0
BRAF--SND1 5 15 5.00 0.07 BRAF^ENSG00000157764.14 20032 chr7:140781631:- SND1^ENSG00000197157.11 62453 chr7:127707626:+ INCL_NON_REF_SPLICE NO 1750 4499 0.01 0.00 GG 1.8892 AA 1.9329 0.0171 2476 0
BRAF--SND1 3 15 3.00 0.04 BRAF^ENSG00000157764.14 15369 chr7:140794307:- SND1^ENSG00000197157.11 71690 chr7:127929190:+ INCL_NON_REF_SPLICE YES 894 2401 0.02 0.01 TA 1.8892 GA 1.4716 0.0103 2595 0
BRAF--SND1 3 14 3.00 0.04 BRAF^ENSG00000157764.14 15372 chr7:140794304:- SND1^ENSG00000197157.11 71693 chr7:127929193:+ INCL_NON_REF_SPLICE YES 889 2418 0.02 0.01 GT 1.7056 AC 1.3383 0.0103 2596 0
BRAF--SND1 2 0 2.00 0.00 BRAF^ENSG00000157764.14 5091 chr7:140834609:- SND1^ENSG00000197157.11 71688 chr7:127929188:+ ONLY_REF_SPLICE YES 1128 2372 0.00 0.00 GT 1.6895 AG 1.6402 0.0068 1198 0
BRAF--SND1 2 0 2.00 0.00 BRAF^ENSG00000157764.14 1364 chr7:140924566:- SND1^ENSG00000197157.11 73936 chr7:127990947:+ ONLY_REF_SPLICE YES 1221 2235 0.00 0.00 GT 1.8892 AG 1.9656 0.0068 4064 0
GGA2--PET100 828 3 828.00 3.00 GGA2^ENSG00000103365.15 11940 chr16:23482923:- PET100^ENSG00000229833.10 27772 chr19:7630624:+ INCL_NON_REF_SPLICE YES 563 875 1.48 0.95 GT 1.9899 AG 1.7968 2.8141 1180 0
PRKDC--UCN3 503 8 503.00 7.94 PRKDC^ENSG00000253729.8 30128 chr8:47893139:- UCN3^ENSG00000178473.7 90003 chr10:5373715:+ ONLY_REF_SPLICE YES 1239 26 0.41 18.96 GT 1.8892 AG 1.7465 1.7303 76 1
PRKDC--UCN3 4 8 4.00 0.06 PRKDC^ENSG00000253729.8 30127 chr8:47893140:- UCN3^ENSG00000178473.7 90003 chr10:5373715:+ INCL_NON_REF_SPLICE YES 1263 26 0.01 0.48 GG 1.8892 AG 1.7465 0.0137 75 1
STX16--NPEPL1 281 4 281.00 3.99 STX16^ENSG00000124222.22 8855 chr20:58673711:+ NPEPL1^ENSG00000215440.12 17277 chr20:58691724:+ ONLY_REF_SPLICE YES 1987 161 0.14 1.77 GT 1.7968 AG 1.8256 0.9651 1940 0
STX16--NPEPL1 3 1 3.00 0.01 STX16^ENSG00000124222.22 7774 chr20:58671297:+ NPEPL1^ENSG00000215440.12 17277 chr20:58691724:+ ONLY_REF_SPLICE YES 2110 161 0.00 0.03 GT 1.8062 AG 1.8256 0.0102 2729 0
STX16--NPEPL1 3 0 3.00 0.00 STX16^ENSG00000124222.22 1835 chr20:58652087:+ NPEPL1^ENSG00000215440.12 17277 chr20:58691724:+ ONLY_REF_SPLICE YES 3119 161 0.00 0.02 GT 1.9899 AG 1.8256 0.0102 1258 0
STX16--NPEPL1 3 0 3.00 0.00 STX16^ENSG00000124222.22 1886 chr20:58652138:+ NPEPL1^ENSG00000215440.12 17277 chr20:58691724:+ ONLY_REF_SPLICE YES 3251 161 0.00 0.02 GT 1.9329 AG 1.8256 0.0102 1285 0
PCDHGB2--PCDHGA10 172 1 21.50 0.12 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA10^ENSG00000253846.2 12051 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 504 174.00 0.34 GT 1.7819 AG 1.3383 0.0732 1890 0
PCDHGB2--PCDHGA11 172 1 21.50 0.12 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA11^ENSG00000253873.6 11222 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 9 174.00 17.40 GT 1.7819 AG 1.3383 0.0732 1018 0
PCDHGB2--PCDHGA12 172 1 21.50 0.12 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA12^ENSG00000253159.3 10305 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 32 174.00 5.27 GT 1.7819 AG 1.3383 0.0732 1413 0
PCDHGB2--PCDHGA8 172 1 21.50 0.12 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA8^ENSG00000253767.3 14069 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 4 174.00 34.80 GT 1.7819 AG 1.3383 0.0732 1419 0
PCDHGB2--PCDHGA9 172 1 21.50 0.12 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA9^ENSG00000261934.2 10157 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 21 174.00 7.91 GT 1.7819 AG 1.3383 0.0732 1493 0
PCDHGB2--PCDHGC3 172 1 21.50 0.12 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC3^ENSG00000240184.7 10438 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 266 174.00 0.65 GT 1.7819 AG 1.3383 0.0732 1210 0
PCDHGB2--PCDHGC4 172 1 21.50 0.12 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC4^ENSG00000242419.5 10382 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 2 174.00 58.00 GT 1.7819 AG 1.3383 0.0732 1585 0
PCDHGB2--PCDHGC5 172 1 21.50 0.12 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC5^ENSG00000240764.4 10438 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 6 174.00 24.86 GT 1.7819 AG 1.3383 0.0732 1206 0
PMS2P6--CCDC146 120 3 120.00 2.40 PMS2P6^ENSG00000174384.9 3690 chr7:73097567:+ CCDC146^ENSG00000135205.15 10176 chr7:77167658:+ ONLY_REF_SPLICE YES 123 25 1.00 4.77 GT 1.4566 AG 1.7465 0.4145 6786 0
PMS2P6--CCDC146 29 4 29.00 1.36 PMS2P6^ENSG00000174384.9 4779 chr7:73100706:+ CCDC146^ENSG00000135205.15 10176 chr7:77167658:+ ONLY_REF_SPLICE YES 85 25 0.40 1.31 GT 1.8323 AG 1.7465 0.1028 7283 0
PMS2P6--CCDC146 12 0 12.00 0.00 PMS2P6^ENSG00000174384.9 3690 chr7:73097567:+ CCDC146^ENSG00000135205.15 11343 chr7:77236947:+ ONLY_REF_SPLICE YES 123 92 0.10 0.14 GT 1.4566 AG 1.9329 0.0406 5731 0
PMS2P6--CCDC146 9 1 9.00 0.23 PMS2P6^ENSG00000174384.9 4779 chr7:73100706:+ CCDC146^ENSG00000135205.15 11343 chr7:77236947:+ ONLY_REF_SPLICE YES 85 92 0.13 0.12 GT 1.8323 AG 1.9329 0.0313 6311 0
PMS2P6--CCDC146 1 0 1.00 0.00 PMS2P6^ENSG00000174384.9 3690 chr7:73097567:+ CCDC146^ENSG00000135205.15 14166 chr7:77254506:+ ONLY_REF_SPLICE YES 123 58 0.02 0.03 GT 1.4566 AG 1.5546 0.0034 3488 0
TLK2--AC240565.1 101 0 98.48 0.00 TLK2^ENSG00000146872.18 17137 chr17:62560126:+ AC240565.1^ENSG00000280136.2 41242 chr17:106864:- ONLY_REF_SPLICE YES 522 63 0.20 1.59 GT 1.8892 AG 1.8892 0.3335 1734 0
TLK2P1--AC110079.1 75 0 71.52 0.00 TLK2P1^ENSG00000226049.3 1830 chr17:34039043:- AC110079.1^ENSG00000260404.3 8316 chr4:118595912:+ INCL_NON_REF_SPLICE YES 37 79 2.00 0.95 GT 1.7465 AG 1.8892 0.2422 311 0
CAST--LIX1-AS1 67 3 67.00 2.58 CAST^ENSG00000153113.24 41746 chr5:96767999:+ LIX1-AS1^ENSG00000251513.2 54881 chr5:97101759:+ ONLY_REF_SPLICE YES 1179 0 0.06 71.00 GT 1.4566 AG 1.7968 0.2356 2603 0
CAST--LIX1-AS1 18 2 18.00 0.42 CAST^ENSG00000153113.24 41746 chr5:96767999:+ LIX1-AS1^ENSG00000251513.2 57217 chr5:97183008:+ ONLY_REF_SPLICE YES 1179 43 0.02 0.48 GT 1.4566 AG 1.6402 0.0624 832 0
CAST--LIX1-AS1 3 0 3.00 0.00 CAST^ENSG00000153113.24 41746 chr5:96767999:+ LIX1-AS1^ENSG00000251513.2 58879 chr5:97431744:+ ONLY_REF_SPLICE YES 1179 9 0.00 0.40 GT 1.4566 AG 1.5850 0.0102 1119 0
TVP23C--CDRT4 57 6 57.00 4.36 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- INCL_NON_REF_SPLICE YES 145 14 0.44 4.27 GT 1.9329 AG 1.9899 0.2078 1215 0
TVP23C--CDRT4 30 1 30.00 0.29 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 355 14 0.09 2.13 GT 1.8323 AG 1.9899 0.1026 2126 0
TVP23C--CDRT4 26 4 26.00 1.23 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- INCL_NON_REF_SPLICE YES 145 55 0.21 0.55 GT 1.9329 AG 1.6402 0.0922 137 0
TVP23C--CDRT4 16 0 16.00 0.00 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 355 55 0.05 0.30 GT 1.8323 AG 1.6402 0.0542 1363 0
TVP23C--CDRT4 10 1 10.00 0.10 TVP23C^ENSG00000175106.17 12676 chr17:15516419:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 24 14 0.48 0.80 GT 1.8892 AG 1.9899 0.0342 1949 0
TVP23C--CDRT4 7 0 7.00 0.00 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 224 14 0.04 0.53 GT 1.9086 AG 1.9899 0.0237 1774 0
TVP23C--CDRT4 3 1 3.00 0.03 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 21051 chr17:15453085:- ONLY_REF_SPLICE YES 355 1 0.01 2.50 GT 1.8323 AG 1.8892 0.0103 1044 0
TVP23C--CDRT4 2 0 2.00 0.00 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 224 55 0.01 0.05 GT 1.9086 AG 1.6402 0.0068 697 0
TVP23C--CDRT4 2 0 2.00 0.00 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 21051 chr17:15453085:- ONLY_REF_SPLICE YES 224 1 0.01 1.50 GT 1.9086 AG 1.8892 0.0068 1679 0
TVP23C--CDRT4 1 0 1.00 0.00 TVP23C^ENSG00000175106.17 12676 chr17:15516419:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 24 55 0.08 0.04 GT 1.8892 AG 1.6402 0.0034 873 0
CRYZL2P--SEC16B 37 2 37.00 1.68 CRYZL2P^ENSG00000242193.11 8825 chr1:178026155:- SEC16B^ENSG00000120341.18 19663 chr1:177968039:- ONLY_REF_SPLICE YES 1 33 20.00 1.18 GT 1.9086 AG 1.5546 0.131 2589 0
CRYZL2P--SEC16B 5 2 5.00 0.23 CRYZL2P^ENSG00000242193.11 11220 chr1:178022440:- SEC16B^ENSG00000120341.18 19663 chr1:177968039:- ONLY_REF_SPLICE YES 4 33 1.60 0.24 GT 1.9656 AG 1.5546 0.0177 2635 0
CRYZL2P--SEC16B 2 2 2.00 0.09 CRYZL2P^ENSG00000242193.11 9991 chr1:178024404:- SEC16B^ENSG00000120341.18 19663 chr1:177968039:- ONLY_REF_SPLICE YES 1 33 2.50 0.15 GT 1.6895 AG 1.5546 0.0071 2356 0
SMG6--AC006435.2 28 1 28.00 0.90 SMG6^ENSG00000070366.14 22176 chr17:2172658:- AC006435.2^ENSG00000263345.1 41596 chr17:2376852:- ONLY_REF_SPLICE YES 308 99 0.10 0.30 GT 1.8295 AG 1.9219 0.0978 808 0
SMG6--AC006435.2 15 0 15.00 0.00 SMG6^ENSG00000070366.14 22176 chr17:2172658:- AC006435.2^ENSG00000263345.1 42756 chr17:2375692:- ONLY_REF_SPLICE YES 308 1100 0.05 0.01 GT 1.8295 AG 1.9329 0.0508 1069 0
SMG6--AC006435.2 3 1 3.00 0.10 SMG6^ENSG00000070366.14 22176 chr17:2172658:- AC006435.2^ENSG00000263345.1 39514 chr17:2379333:- INCL_NON_REF_SPLICE YES 308 0 0.02 5.00 GT 1.8295 AG 1.9086 0.0105 1265 0
SMG6--AC006435.2 1 0 1.00 0.00 SMG6^ENSG00000070366.14 20655 chr17:2186663:- AC006435.2^ENSG00000263345.1 42756 chr17:2375692:- ONLY_REF_SPLICE YES 539 1100 0.00 0.00 GT 1.8892 AG 1.9329 0.0034 2460 0
KLRC4--KLRK1 26 0 26.00 0.00 KLRC4^ENSG00000183542.5 3122 chr12:10407636:- KLRK1^ENSG00000213809.9 8583 chr12:10388875:- INCL_NON_REF_SPLICE YES 16 64 1.59 0.42 GT 1.3996 AG 1.9219 0.088 1207 0
66 rows