#FusionName	JunctionReadCount	SpanningFragCount	est_J	est_S	LeftGene	LeftLocalBreakpoint	LeftBreakpoint	RightGene	RightLocalBreakpoint	RightBreakpoint	SpliceType	LargeAnchorSupport	NumCounterFusionLeft	NumCounterFusionRight	FAR_left	FAR_right	LeftBreakDinuc	LeftBreakEntropy	RightBreakDinuc	RightBreakEntropy	FFPM	microh_brkpt_dist	num_microh_near_brkpt
SND1--BRAF	1445	30	1445.00	28.04	SND1^ENSG00000197157.11	20479	chr7:127904819:+	BRAF^ENSG00000157764.14	55981	chr7:140787584:-	ONLY_REF_SPLICE	YES	2402	769	0.61	1.92	GT	1.9329	AG	1.9329	4.9883	2172	0
SND1--BRAF	52	31	51.05	1.71	SND1^ENSG00000197157.11	22748	chr7:127929329:+	BRAF^ENSG00000157764.14	49278	chr7:140808995:-	ONLY_REF_SPLICE	YES	2307	1040	0.04	0.08	GT	1.7819	AG	1.9656	0.1787	2200	0
SND1--BRAF	17	30	17.00	0.33	SND1^ENSG00000197157.11	22748	chr7:127929329:+	BRAF^ENSG00000157764.14	54821	chr7:140794467:-	ONLY_REF_SPLICE	YES	2307	1123	0.02	0.04	GT	1.7819	AG	1.7465	0.0587	2389	0
SND1--BRAF	14	23	14.00	0.21	SND1^ENSG00000197157.11	20474	chr7:127904814:+	BRAF^ENSG00000157764.14	55978	chr7:140787587:-	INCL_NON_REF_SPLICE	YES	2602	711	0.01	0.05	CT	1.8062	TG	1.8256	0.0481	2175	0
SND1--BRAF	8	31	8.00	0.27	SND1^ENSG00000197157.11	22748	chr7:127929329:+	BRAF^ENSG00000157764.14	44609	chr7:140834703:-	ONLY_REF_SPLICE	YES	2307	1521	0.02	0.03	GT	1.7819	AG	1.5656	0.028	1285	0
SND1--BRAF	4	31	4.00	0.13	SND1^ENSG00000197157.11	24933	chr7:127991025:+	BRAF^ENSG00000157764.14	51429	chr7:140801445:-	INCL_NON_REF_SPLICE	YES	2696	1155	0.01	0.03	TT	1.9329	AG	1.8892	0.0139	1668	0
SND1--BRAF	3	31	3.00	0.10	SND1^ENSG00000197157.11	37120	chr7:128092117:+	BRAF^ENSG00000157764.14	44521	chr7:140834791:-	INCL_NON_REF_SPLICE	YES	2176	1307	0.02	0.03	AG	1.5656	CT	1.4256	0.0105	361	0
SND1--BRAF	2	31	2.00	0.07	SND1^ENSG00000197157.11	22748	chr7:127929329:+	BRAF^ENSG00000157764.14	51314	chr7:140801560:-	ONLY_REF_SPLICE	YES	2307	1099	0.01	0.03	GT	1.7819	AG	1.8892	0.007	1724	0
SND1--BRAF	1	31	1.00	0.03	SND1^ENSG00000197157.11	22748	chr7:127929329:+	BRAF^ENSG00000157764.14	44440	chr7:140834872:-	ONLY_REF_SPLICE	YES	2307	988	0.01	0.03	GT	1.7819	AG	1.9219	0.0035	1232	0
SND1--BRAF	1	31	1.00	0.03	SND1^ENSG00000197157.11	24964	chr7:127991056:+	BRAF^ENSG00000157764.14	49278	chr7:140808995:-	ONLY_REF_SPLICE	YES	2729	1040	0.01	0.03	GT	1.8295	AG	1.9656	0.0035	1260	0
SND1--BRAF	1	31	1.00	0.03	SND1^ENSG00000197157.11	30032	chr7:128074690:+	BRAF^ENSG00000157764.14	44609	chr7:140834703:-	ONLY_REF_SPLICE	YES	3181	1521	0.01	0.02	GT	1.2310	AG	1.5656	0.0035	1268	0
SND1--BRAF	1	31	1.00	0.03	SND1^ENSG00000197157.11	24964	chr7:127991056:+	BRAF^ENSG00000157764.14	44609	chr7:140834703:-	ONLY_REF_SPLICE	YES	2729	1521	0.01	0.02	GT	1.8295	AG	1.5656	0.0035	1109	0
SND1--BRAF	3	0	3.00	0.00	SND1^ENSG00000197157.11	13393	chr7:127707647:+	BRAF^ENSG00000157764.14	62469	chr7:140778075:-	ONLY_REF_SPLICE	YES	4386	1479	0.00	0.00	GT	1.9656	AG	1.7465	0.0102	2321	0
SND1--BRAF	1	2	1.00	0.00	SND1^ENSG00000197157.11	20479	chr7:127904819:+	BRAF^ENSG00000157764.14	59582	chr7:140781693:-	ONLY_REF_SPLICE	YES	2402	1771	0.00	0.00	GT	1.9329	AG	1.8295	0.0034	1425	0
BRAF--SND1	1025	15	1024.95	14.56	BRAF^ENSG00000157764.14	15368	chr7:140794308:-	SND1^ENSG00000197157.11	71688	chr7:127929188:+	ONLY_REF_SPLICE	YES	966	2372	1.08	0.44	GT	1.8892	AG	1.6402	3.5202	2595	0
BRAF--SND1	15	15	15.00	0.21	BRAF^ENSG00000157764.14	15368	chr7:140794308:-	SND1^ENSG00000197157.11	70561	chr7:127928060:+	ONLY_REF_SPLICE	YES	966	2150	0.03	0.01	GT	1.8892	AG	1.8892	0.0515	3273	0
BRAF--SND1	5	15	5.00	0.07	BRAF^ENSG00000157764.14	34939	chr7:140734617:-	SND1^ENSG00000197157.11	65794	chr7:127807484:+	ONLY_REF_SPLICE	NO	1070	3590	0.02	0.01	GT	1.6402	AG	1.3753	0.0171	1075	0
BRAF--SND1	5	15	5.00	0.07	BRAF^ENSG00000157764.14	20032	chr7:140781631:-	SND1^ENSG00000197157.11	62453	chr7:127707626:+	INCL_NON_REF_SPLICE	NO	1750	4499	0.01	0.00	GG	1.8892	AA	1.9329	0.0171	2476	0
BRAF--SND1	3	15	3.00	0.04	BRAF^ENSG00000157764.14	15369	chr7:140794307:-	SND1^ENSG00000197157.11	71690	chr7:127929190:+	INCL_NON_REF_SPLICE	YES	894	2401	0.02	0.01	TA	1.8892	GA	1.4716	0.0103	2595	0
BRAF--SND1	3	14	3.00	0.04	BRAF^ENSG00000157764.14	15372	chr7:140794304:-	SND1^ENSG00000197157.11	71693	chr7:127929193:+	INCL_NON_REF_SPLICE	YES	889	2418	0.02	0.01	GT	1.7056	AC	1.3383	0.0103	2596	0
BRAF--SND1	2	0	2.00	0.00	BRAF^ENSG00000157764.14	5091	chr7:140834609:-	SND1^ENSG00000197157.11	71688	chr7:127929188:+	ONLY_REF_SPLICE	YES	1128	2372	0.00	0.00	GT	1.6895	AG	1.6402	0.0068	1198	0
BRAF--SND1	2	0	2.00	0.00	BRAF^ENSG00000157764.14	1364	chr7:140924566:-	SND1^ENSG00000197157.11	73936	chr7:127990947:+	ONLY_REF_SPLICE	YES	1221	2235	0.00	0.00	GT	1.8892	AG	1.9656	0.0068	4064	0
GGA2--PET100	828	3	828.00	3.00	GGA2^ENSG00000103365.15	11940	chr16:23482923:-	PET100^ENSG00000229833.10	27772	chr19:7630624:+	INCL_NON_REF_SPLICE	YES	563	875	1.48	0.95	GT	1.9899	AG	1.7968	2.8141	1180	0
PRKDC--UCN3	503	8	503.00	7.94	PRKDC^ENSG00000253729.8	30128	chr8:47893139:-	UCN3^ENSG00000178473.7	90003	chr10:5373715:+	ONLY_REF_SPLICE	YES	1239	26	0.41	18.96	GT	1.8892	AG	1.7465	1.7303	76	1
PRKDC--UCN3	4	8	4.00	0.06	PRKDC^ENSG00000253729.8	30127	chr8:47893140:-	UCN3^ENSG00000178473.7	90003	chr10:5373715:+	INCL_NON_REF_SPLICE	YES	1263	26	0.01	0.48	GG	1.8892	AG	1.7465	0.0137	75	1
STX16--NPEPL1	281	4	281.00	3.99	STX16^ENSG00000124222.22	8855	chr20:58673711:+	NPEPL1^ENSG00000215440.12	17277	chr20:58691724:+	ONLY_REF_SPLICE	YES	1987	161	0.14	1.77	GT	1.7968	AG	1.8256	0.9651	1940	0
STX16--NPEPL1	3	1	3.00	0.01	STX16^ENSG00000124222.22	7774	chr20:58671297:+	NPEPL1^ENSG00000215440.12	17277	chr20:58691724:+	ONLY_REF_SPLICE	YES	2110	161	0.00	0.03	GT	1.8062	AG	1.8256	0.0102	2729	0
STX16--NPEPL1	3	0	3.00	0.00	STX16^ENSG00000124222.22	1835	chr20:58652087:+	NPEPL1^ENSG00000215440.12	17277	chr20:58691724:+	ONLY_REF_SPLICE	YES	3119	161	0.00	0.02	GT	1.9899	AG	1.8256	0.0102	1258	0
STX16--NPEPL1	3	0	3.00	0.00	STX16^ENSG00000124222.22	1886	chr20:58652138:+	NPEPL1^ENSG00000215440.12	17277	chr20:58691724:+	ONLY_REF_SPLICE	YES	3251	161	0.00	0.02	GT	1.9329	AG	1.8256	0.0102	1285	0
PCDHGB2--PCDHGA10	172	1	21.50	0.12	PCDHGB2^ENSG00000253910.2	3515	chr5:141362556:+	PCDHGA10^ENSG00000253846.2	12051	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	504	174.00	0.34	GT	1.7819	AG	1.3383	0.0732	1890	0
PCDHGB2--PCDHGA11	172	1	21.50	0.12	PCDHGB2^ENSG00000253910.2	3515	chr5:141362556:+	PCDHGA11^ENSG00000253873.6	11222	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	9	174.00	17.40	GT	1.7819	AG	1.3383	0.0732	1018	0
PCDHGB2--PCDHGA12	172	1	21.50	0.12	PCDHGB2^ENSG00000253910.2	3515	chr5:141362556:+	PCDHGA12^ENSG00000253159.3	10305	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	32	174.00	5.27	GT	1.7819	AG	1.3383	0.0732	1413	0
PCDHGB2--PCDHGA8	172	1	21.50	0.12	PCDHGB2^ENSG00000253910.2	3515	chr5:141362556:+	PCDHGA8^ENSG00000253767.3	14069	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	4	174.00	34.80	GT	1.7819	AG	1.3383	0.0732	1419	0
PCDHGB2--PCDHGA9	172	1	21.50	0.12	PCDHGB2^ENSG00000253910.2	3515	chr5:141362556:+	PCDHGA9^ENSG00000261934.2	10157	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	21	174.00	7.91	GT	1.7819	AG	1.3383	0.0732	1493	0
PCDHGB2--PCDHGC3	172	1	21.50	0.12	PCDHGB2^ENSG00000253910.2	3515	chr5:141362556:+	PCDHGC3^ENSG00000240184.7	10438	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	266	174.00	0.65	GT	1.7819	AG	1.3383	0.0732	1210	0
PCDHGB2--PCDHGC4	172	1	21.50	0.12	PCDHGB2^ENSG00000253910.2	3515	chr5:141362556:+	PCDHGC4^ENSG00000242419.5	10382	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	2	174.00	58.00	GT	1.7819	AG	1.3383	0.0732	1585	0
PCDHGB2--PCDHGC5	172	1	21.50	0.12	PCDHGB2^ENSG00000253910.2	3515	chr5:141362556:+	PCDHGC5^ENSG00000240764.4	10438	chr5:141494807:+	INCL_NON_REF_SPLICE	YES	0	6	174.00	24.86	GT	1.7819	AG	1.3383	0.0732	1206	0
PMS2P6--CCDC146	120	3	120.00	2.40	PMS2P6^ENSG00000174384.9	3690	chr7:73097567:+	CCDC146^ENSG00000135205.15	10176	chr7:77167658:+	ONLY_REF_SPLICE	YES	123	25	1.00	4.77	GT	1.4566	AG	1.7465	0.4145	6786	0
PMS2P6--CCDC146	29	4	29.00	1.36	PMS2P6^ENSG00000174384.9	4779	chr7:73100706:+	CCDC146^ENSG00000135205.15	10176	chr7:77167658:+	ONLY_REF_SPLICE	YES	85	25	0.40	1.31	GT	1.8323	AG	1.7465	0.1028	7283	0
PMS2P6--CCDC146	12	0	12.00	0.00	PMS2P6^ENSG00000174384.9	3690	chr7:73097567:+	CCDC146^ENSG00000135205.15	11343	chr7:77236947:+	ONLY_REF_SPLICE	YES	123	92	0.10	0.14	GT	1.4566	AG	1.9329	0.0406	5731	0
PMS2P6--CCDC146	9	1	9.00	0.23	PMS2P6^ENSG00000174384.9	4779	chr7:73100706:+	CCDC146^ENSG00000135205.15	11343	chr7:77236947:+	ONLY_REF_SPLICE	YES	85	92	0.13	0.12	GT	1.8323	AG	1.9329	0.0313	6311	0
PMS2P6--CCDC146	1	0	1.00	0.00	PMS2P6^ENSG00000174384.9	3690	chr7:73097567:+	CCDC146^ENSG00000135205.15	14166	chr7:77254506:+	ONLY_REF_SPLICE	YES	123	58	0.02	0.03	GT	1.4566	AG	1.5546	0.0034	3488	0
TLK2--AC240565.1	101	0	98.48	0.00	TLK2^ENSG00000146872.18	17137	chr17:62560126:+	AC240565.1^ENSG00000280136.2	41242	chr17:106864:-	ONLY_REF_SPLICE	YES	522	63	0.20	1.59	GT	1.8892	AG	1.8892	0.3335	1734	0
TLK2P1--AC110079.1	75	0	71.52	0.00	TLK2P1^ENSG00000226049.3	1830	chr17:34039043:-	AC110079.1^ENSG00000260404.3	8316	chr4:118595912:+	INCL_NON_REF_SPLICE	YES	37	79	2.00	0.95	GT	1.7465	AG	1.8892	0.2422	311	0
CAST--LIX1-AS1	67	3	67.00	2.58	CAST^ENSG00000153113.24	41746	chr5:96767999:+	LIX1-AS1^ENSG00000251513.2	54881	chr5:97101759:+	ONLY_REF_SPLICE	YES	1179	0	0.06	71.00	GT	1.4566	AG	1.7968	0.2356	2603	0
CAST--LIX1-AS1	18	2	18.00	0.42	CAST^ENSG00000153113.24	41746	chr5:96767999:+	LIX1-AS1^ENSG00000251513.2	57217	chr5:97183008:+	ONLY_REF_SPLICE	YES	1179	43	0.02	0.48	GT	1.4566	AG	1.6402	0.0624	832	0
CAST--LIX1-AS1	3	0	3.00	0.00	CAST^ENSG00000153113.24	41746	chr5:96767999:+	LIX1-AS1^ENSG00000251513.2	58879	chr5:97431744:+	ONLY_REF_SPLICE	YES	1179	9	0.00	0.40	GT	1.4566	AG	1.5850	0.0102	1119	0
TVP23C--CDRT4	57	6	57.00	4.36	TVP23C^ENSG00000175106.17	14926	chr17:15503098:-	CDRT4^ENSG00000239704.11	22624	chr17:15440285:-	INCL_NON_REF_SPLICE	YES	145	14	0.44	4.27	GT	1.9329	AG	1.9899	0.2078	1215	0
TVP23C--CDRT4	30	1	30.00	0.29	TVP23C^ENSG00000175106.17	7982	chr17:15540433:-	CDRT4^ENSG00000239704.11	22624	chr17:15440285:-	ONLY_REF_SPLICE	YES	355	14	0.09	2.13	GT	1.8323	AG	1.9899	0.1026	2126	0
TVP23C--CDRT4	26	4	26.00	1.23	TVP23C^ENSG00000175106.17	14926	chr17:15503098:-	CDRT4^ENSG00000239704.11	23702	chr17:15438200:-	INCL_NON_REF_SPLICE	YES	145	55	0.21	0.55	GT	1.9329	AG	1.6402	0.0922	137	0
TVP23C--CDRT4	16	0	16.00	0.00	TVP23C^ENSG00000175106.17	7982	chr17:15540433:-	CDRT4^ENSG00000239704.11	23702	chr17:15438200:-	ONLY_REF_SPLICE	YES	355	55	0.05	0.30	GT	1.8323	AG	1.6402	0.0542	1363	0
TVP23C--CDRT4	10	1	10.00	0.10	TVP23C^ENSG00000175106.17	12676	chr17:15516419:-	CDRT4^ENSG00000239704.11	22624	chr17:15440285:-	ONLY_REF_SPLICE	YES	24	14	0.48	0.80	GT	1.8892	AG	1.9899	0.0342	1949	0
TVP23C--CDRT4	7	0	7.00	0.00	TVP23C^ENSG00000175106.17	6853	chr17:15545785:-	CDRT4^ENSG00000239704.11	22624	chr17:15440285:-	ONLY_REF_SPLICE	YES	224	14	0.04	0.53	GT	1.9086	AG	1.9899	0.0237	1774	0
TVP23C--CDRT4	3	1	3.00	0.03	TVP23C^ENSG00000175106.17	7982	chr17:15540433:-	CDRT4^ENSG00000239704.11	21051	chr17:15453085:-	ONLY_REF_SPLICE	YES	355	1	0.01	2.50	GT	1.8323	AG	1.8892	0.0103	1044	0
TVP23C--CDRT4	2	0	2.00	0.00	TVP23C^ENSG00000175106.17	6853	chr17:15545785:-	CDRT4^ENSG00000239704.11	23702	chr17:15438200:-	ONLY_REF_SPLICE	YES	224	55	0.01	0.05	GT	1.9086	AG	1.6402	0.0068	697	0
TVP23C--CDRT4	2	0	2.00	0.00	TVP23C^ENSG00000175106.17	6853	chr17:15545785:-	CDRT4^ENSG00000239704.11	21051	chr17:15453085:-	ONLY_REF_SPLICE	YES	224	1	0.01	1.50	GT	1.9086	AG	1.8892	0.0068	1679	0
TVP23C--CDRT4	1	0	1.00	0.00	TVP23C^ENSG00000175106.17	12676	chr17:15516419:-	CDRT4^ENSG00000239704.11	23702	chr17:15438200:-	ONLY_REF_SPLICE	YES	24	55	0.08	0.04	GT	1.8892	AG	1.6402	0.0034	873	0
CRYZL2P--SEC16B	37	2	37.00	1.68	CRYZL2P^ENSG00000242193.11	8825	chr1:178026155:-	SEC16B^ENSG00000120341.18	19663	chr1:177968039:-	ONLY_REF_SPLICE	YES	1	33	20.00	1.18	GT	1.9086	AG	1.5546	0.131	2589	0
CRYZL2P--SEC16B	5	2	5.00	0.23	CRYZL2P^ENSG00000242193.11	11220	chr1:178022440:-	SEC16B^ENSG00000120341.18	19663	chr1:177968039:-	ONLY_REF_SPLICE	YES	4	33	1.60	0.24	GT	1.9656	AG	1.5546	0.0177	2635	0
CRYZL2P--SEC16B	2	2	2.00	0.09	CRYZL2P^ENSG00000242193.11	9991	chr1:178024404:-	SEC16B^ENSG00000120341.18	19663	chr1:177968039:-	ONLY_REF_SPLICE	YES	1	33	2.50	0.15	GT	1.6895	AG	1.5546	0.0071	2356	0
SMG6--AC006435.2	28	1	28.00	0.90	SMG6^ENSG00000070366.14	22176	chr17:2172658:-	AC006435.2^ENSG00000263345.1	41596	chr17:2376852:-	ONLY_REF_SPLICE	YES	308	99	0.10	0.30	GT	1.8295	AG	1.9219	0.0978	808	0
SMG6--AC006435.2	15	0	15.00	0.00	SMG6^ENSG00000070366.14	22176	chr17:2172658:-	AC006435.2^ENSG00000263345.1	42756	chr17:2375692:-	ONLY_REF_SPLICE	YES	308	1100	0.05	0.01	GT	1.8295	AG	1.9329	0.0508	1069	0
SMG6--AC006435.2	3	1	3.00	0.10	SMG6^ENSG00000070366.14	22176	chr17:2172658:-	AC006435.2^ENSG00000263345.1	39514	chr17:2379333:-	INCL_NON_REF_SPLICE	YES	308	0	0.02	5.00	GT	1.8295	AG	1.9086	0.0105	1265	0
SMG6--AC006435.2	1	0	1.00	0.00	SMG6^ENSG00000070366.14	20655	chr17:2186663:-	AC006435.2^ENSG00000263345.1	42756	chr17:2375692:-	ONLY_REF_SPLICE	YES	539	1100	0.00	0.00	GT	1.8892	AG	1.9329	0.0034	2460	0
KLRC4--KLRK1	26	0	26.00	0.00	KLRC4^ENSG00000183542.5	3122	chr12:10407636:-	KLRK1^ENSG00000213809.9	8583	chr12:10388875:-	INCL_NON_REF_SPLICE	YES	16	64	1.59	0.42	GT	1.3996	AG	1.9219	0.088	1207	0