File Info

Filename
659_cTi-T1-TRNA-1_A23MVY2LT4_2.FusionInspector.fusions.abridged.tsv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0014_0015/A23MVY2LT4/nfcore_rnafusion__73d51683--20260607-225254/fusioninspector/659_cTi-T1-TRNA-1_A23MVY2LT4_2.FusionInspector.fusions.abridged.tsv
Size
9.8 KB
Workflow Run
dev_rna_exp0014_exp0015-73d51683
Published
Jun 08, 2026 5:08 AM

Content

View in new tab
#FusionName JunctionReadCount SpanningFragCount est_J est_S LeftGene LeftLocalBreakpoint LeftBreakpoint RightGene RightLocalBreakpoint RightBreakpoint SpliceType LargeAnchorSupport NumCounterFusionLeft NumCounterFusionRight FAR_left FAR_right LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy FFPM microh_brkpt_dist num_microh_near_brkpt
PCDHGB2--PCDHGA10 308 1 38.50 0.12 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA10^ENSG00000253846.2 12051 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 158 310.00 1.95 GT 1.7819 AG 1.3383 0.1307 1890 0
PCDHGB2--PCDHGA11 308 1 38.50 0.12 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA11^ENSG00000253873.6 11222 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 26 310.00 11.48 GT 1.7819 AG 1.3383 0.1307 1018 0
PCDHGB2--PCDHGA12 308 1 38.50 0.12 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA12^ENSG00000253159.3 10305 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 78 310.00 3.92 GT 1.7819 AG 1.3383 0.1307 1413 0
PCDHGB2--PCDHGA8 308 1 38.50 0.12 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA8^ENSG00000253767.3 14069 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 41 310.00 7.38 GT 1.7819 AG 1.3383 0.1307 1419 0
PCDHGB2--PCDHGA9 308 1 38.50 0.12 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA9^ENSG00000261934.2 10157 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 42 310.00 7.21 GT 1.7819 AG 1.3383 0.1307 1493 0
PCDHGB2--PCDHGC3 308 1 38.50 0.12 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC3^ENSG00000240184.7 10438 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 525 310.00 0.59 GT 1.7819 AG 1.3383 0.1307 1210 0
PCDHGB2--PCDHGC4 308 1 38.50 0.12 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC4^ENSG00000242419.5 10382 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 1 310.00 155.00 GT 1.7819 AG 1.3383 0.1307 1585 0
PCDHGB2--PCDHGC5 308 1 38.50 0.12 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC5^ENSG00000240764.4 10438 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 10 310.00 28.18 GT 1.7819 AG 1.3383 0.1307 1206 0
TVP23C--CDRT4 90 6 90.00 3.85 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- INCL_NON_REF_SPLICE YES 81 6 1.18 13.86 GT 1.9329 AG 1.9899 0.3175 1215 0
TVP23C--CDRT4 69 4 69.00 1.39 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 508 6 0.15 10.57 GT 1.8323 AG 1.9899 0.2382 2126 0
TVP23C--CDRT4 29 3 29.00 0.41 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- INCL_NON_REF_SPLICE YES 81 30 0.40 1.06 GT 1.9329 AG 1.6402 0.0995 137 0
TVP23C--CDRT4 15 3 15.00 0.21 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 508 30 0.04 0.61 GT 1.8323 AG 1.6402 0.0515 1363 0
TVP23C--CDRT4 6 4 6.00 0.12 TVP23C^ENSG00000175106.17 12676 chr17:15516419:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 35 6 0.31 1.57 GT 1.8892 AG 1.9899 0.0207 1949 0
TVP23C--CDRT4 1 3 1.00 0.01 TVP23C^ENSG00000175106.17 12676 chr17:15516419:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 35 30 0.14 0.16 GT 1.8892 AG 1.6402 0.0034 873 0
TVP23C--CDRT4 1 0 1.00 0.00 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 267 6 0.01 0.29 GT 1.9086 AG 1.9899 0.0034 1774 0
TVP23C--CDRT4 1 0 1.00 0.00 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 267 30 0.01 0.06 GT 1.9086 AG 1.6402 0.0034 697 0
AC083805.1--TSFM 80 0 80.00 0.00 AC083805.1^ENSG00000245651.3 5743 chr12:57886528:- TSFM^ENSG00000123297.20 14209 chr12:57783110:+ ONLY_REF_SPLICE YES 0 419 81.00 0.19 GT 1.9656 AG 1.5656 0.2707 221 0
AC083805.1--TSFM 27 0 27.00 0.00 AC083805.1^ENSG00000245651.3 3743 chr12:57893740:- TSFM^ENSG00000123297.20 14209 chr12:57783110:+ ONLY_REF_SPLICE YES 0 419 28.00 0.07 GT 1.8323 AG 1.5656 0.0914 475 0
AC083805.1--TSFM 2 0 2.00 0.00 AC083805.1^ENSG00000245651.3 3743 chr12:57893740:- TSFM^ENSG00000123297.20 16270 chr12:57786163:+ ONLY_REF_SPLICE YES 0 667 3.00 0.00 GT 1.8323 AG 1.9656 0.0068 219 0
AC083805.1--TSFM 1 0 1.00 0.00 AC083805.1^ENSG00000245651.3 5743 chr12:57886528:- TSFM^ENSG00000123297.20 16270 chr12:57786163:+ ONLY_REF_SPLICE YES 0 667 2.00 0.00 GT 1.9656 AG 1.9656 0.0034 1939 0
SAV1--SOS2 72 4 72.00 4.00 SAV1^ENSG00000151748.15 3366 chr14:50665179:- SOS2^ENSG00000100485.12 31807 chr14:50150230:- ONLY_REF_SPLICE YES 283 238 0.27 0.32 GT 1.9219 AG 1.6402 0.2571 2108 0
PCDHA4--PCDHAC1 69 0 34.50 0.00 PCDHA4^ENSG00000204967.12 3644 chr5:140809572:+ PCDHAC1^ENSG00000248383.5 19813 chr5:140978949:+ ONLY_REF_SPLICE YES 34 9 2.00 7.00 GT 1.9656 AG 1.3996 0.1167 1304 0
PCDHA4--PCDHAC2 69 0 34.50 0.00 PCDHA4^ENSG00000204967.12 3644 chr5:140809572:+ PCDHAC2^ENSG00000243232.6 18677 chr5:140978949:+ ONLY_REF_SPLICE YES 34 67 2.00 1.03 GT 1.9656 AG 1.3996 0.1167 1213 0
TMEM243--AC020637.1 59 1 59.00 0.70 TMEM243^ENSG00000135185.12 7097 chr7:87197941:- AC020637.1^ENSG00000258231.5 11879 chr12:58544124:+ ONLY_REF_SPLICE YES 1453 0 0.04 61.00 GT 1.9086 AG 1.9656 0.202 2901 0
TMEM243--AC020637.1 38 0 38.00 0.00 TMEM243^ENSG00000135185.12 2162 chr7:87219426:- AC020637.1^ENSG00000258231.5 11879 chr12:58544124:+ ONLY_REF_SPLICE YES 1810 0 0.02 39.00 GT 1.8256 AG 1.9656 0.1286 2497 0
TMEM243--AC020637.1 15 0 15.00 0.00 TMEM243^ENSG00000135185.12 6031 chr7:87199007:- AC020637.1^ENSG00000258231.5 11879 chr12:58544124:+ ONLY_REF_SPLICE YES 1583 0 0.01 16.00 GT 1.6729 AG 1.9656 0.0508 1958 0
TMEM243--AC020637.1 14 2 14.00 0.76 TMEM243^ENSG00000135185.12 8455 chr7:87196583:- AC020637.1^ENSG00000258231.5 11879 chr12:58544124:+ INCL_NON_REF_SPLICE YES 230 0 0.07 17.00 GT 1.8892 AG 1.9656 0.05 4189 0
TMEM243--AC020637.1 10 2 10.00 0.54 TMEM243^ENSG00000135185.12 8398 chr7:87196640:- AC020637.1^ENSG00000258231.5 11879 chr12:58544124:+ INCL_NON_REF_SPLICE YES 765 0 0.02 13.00 GT 1.8892 AG 1.9656 0.0356 4134 0
TYW1--VKORC1L1 56 2 56.00 1.83 TYW1^ENSG00000198874.13 11325 chr7:67055887:+ VKORC1L1^ENSG00000196715.7 26109 chr7:65954074:+ ONLY_REF_SPLICE YES 262 486 0.22 0.12 GT 1.8323 AG 1.8256 0.1957 2365 0
TYW1--VKORC1L1 12 1 12.00 0.17 TYW1^ENSG00000198874.13 10272 chr7:67050066:+ VKORC1L1^ENSG00000196715.7 26109 chr7:65954074:+ ONLY_REF_SPLICE YES 220 486 0.06 0.03 GT 1.7819 AG 1.8256 0.0412 2216 0
TLK2--AC240565.1 47 0 47.00 0.00 TLK2^ENSG00000146872.18 17137 chr17:62560126:+ AC240565.1^ENSG00000280136.2 41242 chr17:106864:- ONLY_REF_SPLICE YES 413 51 0.12 0.92 GT 1.8892 AG 1.8892 0.159 1734 0
PPP2R3B--TMLHE 46 0 46.00 0.00 PPP2R3B^ENSG00000167393.18 1588 chrX:386368:- TMLHE^ENSG00000185973.12 24491 chrX:155545277:- ONLY_REF_SPLICE YES 143 101 0.33 0.46 GT 1.6895 AG 1.9656 0.1556 4671 0
PPP2R3B--TMLHE 2 0 2.00 0.00 PPP2R3B^ENSG00000167393.18 3101 chrX:373532:- TMLHE^ENSG00000185973.12 24491 chrX:155545277:- ONLY_REF_SPLICE YES 116 101 0.03 0.03 GT 1.9329 AG 1.9656 0.0068 3213 0
SRGAP1--GRIP1 38 0 38.00 0.00 SRGAP1^ENSG00000196935.9 1184 chr12:63844883:+ GRIP1^ENSG00000155974.13 69451 chr12:66445508:- ONLY_REF_SPLICE YES 675 194 0.06 0.20 GT 1.7232 AG 1.8323 0.1286 2191 0
SRGAP1--GRIP1 1 0 1.00 0.00 SRGAP1^ENSG00000196935.9 1184 chr12:63844883:+ GRIP1^ENSG00000155974.13 71376 chr12:66432628:- ONLY_REF_SPLICE YES 675 217 0.00 0.01 GT 1.7232 AG 1.9329 0.0034 3889 0
TLK2P1--AC110079.1 35 0 35.00 0.00 TLK2P1^ENSG00000226049.3 1830 chr17:34039043:- AC110079.1^ENSG00000260404.3 8316 chr4:118595912:+ INCL_NON_REF_SPLICE YES 33 40 1.06 0.88 GT 1.7465 AG 1.8892 0.1184 311 0
AC083805.1--EEF1AKMT3 34 1 34.00 1.00 AC083805.1^ENSG00000245651.3 5743 chr12:57886528:- EEF1AKMT3^ENSG00000123427.17 17636 chr12:57780255:+ ONLY_REF_SPLICE YES 0 203 36.00 0.18 GT 1.9656 AG 1.8295 0.1184 613 0
AC083805.1--EEF1AKMT3 3 0 3.00 0.00 AC083805.1^ENSG00000245651.3 3743 chr12:57893740:- EEF1AKMT3^ENSG00000123427.17 17636 chr12:57780255:+ ONLY_REF_SPLICE YES 0 203 4.00 0.02 GT 1.8323 AG 1.8295 0.0102 162 0
RAP1B--SRGAP1 32 5 32.00 4.77 RAP1B^ENSG00000127314.18 8210 chr12:68650468:+ SRGAP1^ENSG00000196935.9 32571 chr12:63983947:+ ONLY_REF_SPLICE YES 3505 612 0.01 0.06 GT 1.7819 AG 1.8892 0.1244 237 0
RAP1B--SRGAP1 11 1 11.00 0.23 RAP1B^ENSG00000127314.18 6523 chr12:68648781:+ SRGAP1^ENSG00000196935.9 32571 chr12:63983947:+ ONLY_REF_SPLICE YES 3824 612 0.00 0.02 GT 1.9086 AG 1.8892 0.038 279 0
RAP1B--SRGAP1 4 0 4.00 0.00 RAP1B^ENSG00000127314.18 1189 chr12:68611043:+ SRGAP1^ENSG00000196935.9 32571 chr12:63983947:+ ONLY_REF_SPLICE YES 1224 612 0.00 0.01 GT 1.7968 AG 1.8892 0.0135 2109 0
RAP1B--SRGAP1 2 0 2.00 0.00 RAP1B^ENSG00000127314.18 1198 chr12:68611052:+ SRGAP1^ENSG00000196935.9 32571 chr12:63983947:+ ONLY_REF_SPLICE YES 1245 612 0.00 0.00 GT 1.8892 AG 1.8892 0.0068 2100 0
AC020637.1--TMEM243 30 0 30.00 0.00 AC020637.1^ENSG00000258231.5 1056 chr12:58544179:+ TMEM243^ENSG00000135185.12 16903 chr7:87199057:- ONLY_REF_SPLICE YES 0 1564 31.00 0.02 GT 1.8062 AG 1.8892 0.1015 1885 0
EEF1AKMT3--CTDSP2 29 0 29.00 0.00 EEF1AKMT3^ENSG00000123427.17 2637 chr12:57773128:+ CTDSP2^ENSG00000175215.11 12354 chr12:57829596:- ONLY_REF_SPLICE YES 82 2167 0.36 0.01 GT 1.7968 AG 1.9329 0.0981 1110 0
KLRC4--KLRK1 23 0 23.00 0.00 KLRC4^ENSG00000183542.5 3122 chr12:10407636:- KLRK1^ENSG00000213809.9 8583 chr12:10388875:- INCL_NON_REF_SPLICE YES 30 63 0.77 0.38 GT 1.3996 AG 1.9219 0.0778 1207 0
MARCHF9--GRIP1 21 0 21.00 0.00 MARCHF9^ENSG00000139266.6 1783 chr12:57755885:+ GRIP1^ENSG00000155974.13 31290 chr12:66432628:- ONLY_REF_SPLICE YES 418 217 0.05 0.10 GT 1.5058 AG 1.9329 0.0711 3265 0
CCDC169--SOHLH2 15 0 15.00 0.00 CCDC169^ENSG00000242715.8 10007 chr13:36248606:- SOHLH2^ENSG00000120669.16 24280 chr13:36202093:- ONLY_REF_SPLICE YES 5 2 2.67 5.33 GT 1.8295 AG 1.7232 0.0508 1362 0
NCOA4--GLUD1P2 11 0 11.00 0.00 NCOA4^ENSG00000266412.6 1098 chr10:46030526:- GLUD1P2^ENSG00000265366.6 25196 chr10:46759160:- ONLY_REF_SPLICE YES 930 1 0.01 6.00 GT 1.9086 AG 1.9219 0.0372 9340 0
49 rows