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659_bGW-T1-TRNA-1_A23MVY2LT4_1.FusionInspector.fusions.abridged.tsv
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0014_0015/A23MVY2LT4/nfcore_rnafusion__73d51683--20260607-225254/fusioninspector/659_bGW-T1-TRNA-1_A23MVY2LT4_1.FusionInspector.fusions.abridged.tsv
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6.5 KB
Workflow Run
dev_rna_exp0014_exp0015-73d51683
Published
Jun 08, 2026 5:25 AM

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#FusionName JunctionReadCount SpanningFragCount est_J est_S LeftGene LeftLocalBreakpoint LeftBreakpoint RightGene RightLocalBreakpoint RightBreakpoint SpliceType LargeAnchorSupport NumCounterFusionLeft NumCounterFusionRight FAR_left FAR_right LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy FFPM microh_brkpt_dist num_microh_near_brkpt
PTPRK--RSPO3 1767 29 1767.00 28.80 PTPRK^ENSG00000152894.15 1358 chr6:128520259:- RSPO3^ENSG00000146374.14 55391 chr6:127148648:+ ONLY_REF_SPLICE YES 738 450 2.43 3.98 GT 1.8892 AG 1.9329 6.0799 1100 0
PTPRK--RSPO3 8 29 8.00 0.13 PTPRK^ENSG00000152894.15 3698 chr6:128491732:- RSPO3^ENSG00000146374.14 55391 chr6:127148648:+ ONLY_REF_SPLICE YES 606 450 0.06 0.08 GT 1.7056 AG 1.9329 0.0275 1692 0
PTPRK--RSPO3 12 1 12.00 0.01 PTPRK^ENSG00000152894.15 1358 chr6:128520259:- RSPO3^ENSG00000146374.14 56583 chr6:127150426:+ ONLY_REF_SPLICE YES 738 1111 0.02 0.01 GT 1.8892 AG 1.9219 0.0406 125 0
PTPRK--RSPO3 4 29 4.00 0.07 PTPRK^ENSG00000152894.15 1358 chr6:128520259:- RSPO3^ENSG00000146374.14 55392 chr6:127148649:+ INCL_NON_REF_SPLICE YES 738 470 0.05 0.07 GT 1.8892 GT 1.9899 0.0137 1101 0
PTPRK--RSPO3 4 0 4.00 0.00 PTPRK^ENSG00000152894.15 1358 chr6:128520259:- RSPO3^ENSG00000146374.14 58928 chr6:127195823:+ ONLY_REF_SPLICE YES 738 298 0.01 0.02 GT 1.8892 AG 0.9710 0.0135 1145 0
DLG5--KCNMA1 160 15 160.00 15.00 DLG5^ENSG00000151208.17 4880 chr10:77856730:- KCNMA1^ENSG00000156113.24 64024 chr10:77121048:- ONLY_REF_SPLICE YES 2499 912 0.07 0.19 GT 1.9656 AG 1.4566 0.5925 2614 0
DLG5--KCNMA1 23 0 23.00 0.00 DLG5^ENSG00000151208.17 3687 chr10:77869129:- KCNMA1^ENSG00000156113.24 64024 chr10:77121048:- ONLY_REF_SPLICE YES 2621 912 0.01 0.03 GT 1.9086 AG 1.4566 0.0779 1692 0
DLG5--KCNMA1 9 0 9.00 0.00 DLG5^ENSG00000151208.17 1539 chr10:77926217:- KCNMA1^ENSG00000156113.24 64024 chr10:77121048:- ONLY_REF_SPLICE YES 2799 912 0.00 0.01 GT 1.4295 AG 1.4566 0.0305 1694 0
WDR19--ATP8A1 91 2 91.00 2.00 WDR19^ENSG00000157796.18 5181 chr4:39194659:+ ATP8A1^ENSG00000124406.16 53992 chr4:42581732:- ONLY_REF_SPLICE YES 132 559 0.71 0.17 GT 1.8892 AG 1.8892 0.3149 1040 0
TLK2--AC240565.1 67 0 64.12 0.00 TLK2^ENSG00000146872.18 17137 chr17:62560126:+ AC240565.1^ENSG00000280136.2 41242 chr17:106864:- ONLY_REF_SPLICE YES 368 17 0.18 3.78 GT 1.8892 AG 1.8892 0.2171 1734 0
POLR2E--KEAP1 64 0 64.00 0.00 POLR2E^ENSG00000099817.12 1122 chr19:1095259:- KEAP1^ENSG00000079999.14 16737 chr19:10492262:- ONLY_REF_SPLICE YES 642 267 0.10 0.24 GT 1.8892 AG 1.7819 0.2167 213 0
RFC1--GPRC5A 56 0 56.00 0.00 RFC1^ENSG00000035928.16 7678 chr4:39327524:- GPRC5A^ENSG00000013588.9 35674 chr12:12908243:+ ONLY_REF_SPLICE YES 218 898 0.26 0.06 GT 1.1589 AG 1.9899 0.1896 2525 0
RFC1--GPRC5A 1 0 1.00 0.00 RFC1^ENSG00000035928.16 7678 chr4:39327524:- GPRC5A^ENSG00000013588.9 38308 chr12:12912084:+ ONLY_REF_SPLICE YES 218 2278 0.01 0.00 GT 1.1589 AG 1.8256 0.0034 2521 0
TLK2P1--AC110079.1 49 0 44.88 0.00 TLK2P1^ENSG00000226049.3 1830 chr17:34039043:- AC110079.1^ENSG00000260404.3 8316 chr4:118595912:+ INCL_NON_REF_SPLICE YES 31 18 1.56 2.63 GT 1.7465 AG 1.8892 0.1519 311 0
GPRC5A--RFC1 37 0 37.00 0.00 GPRC5A^ENSG00000013588.9 1106 chr12:12891664:+ RFC1^ENSG00000035928.16 20418 chr4:39327756:- ONLY_REF_SPLICE YES 804 287 0.05 0.13 GT 1.9086 AG 1.7465 0.1253 3600 0
TVP23C--CDRT4 34 1 34.00 0.50 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 440 7 0.08 4.50 GT 1.8323 AG 1.9899 0.1168 2126 0
TVP23C--CDRT4 30 1 30.00 0.44 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- INCL_NON_REF_SPLICE YES 62 7 0.51 4.00 GT 1.9329 AG 1.9899 0.1031 1215 0
TVP23C--CDRT4 14 0 14.00 0.00 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 440 13 0.03 1.07 GT 1.8323 AG 1.6402 0.0474 1363 0
TVP23C--CDRT4 13 0 13.00 0.00 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 115 7 0.12 1.75 GT 1.9086 AG 1.9899 0.044 1774 0
TVP23C--CDRT4 13 0 13.00 0.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- INCL_NON_REF_SPLICE YES 62 13 0.22 1.00 GT 1.9329 AG 1.6402 0.044 137 0
TVP23C--CDRT4 4 1 4.00 0.06 TVP23C^ENSG00000175106.17 12676 chr17:15516419:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 14 7 0.40 0.75 GT 1.8892 AG 1.9899 0.0137 1949 0
TVP23C--CDRT4 4 0 4.00 0.00 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 115 13 0.04 0.36 GT 1.9086 AG 1.6402 0.0135 697 0
DLG5--CTSLP1 31 0 31.00 0.00 DLG5^ENSG00000151208.17 1539 chr10:77926217:- CTSLP1^ENSG00000236417.2 40458 chr10:87390214:- INCL_NON_REF_SPLICE YES 2797 0 0.01 32.00 GT 1.4295 AG 1.7056 0.105 3567 0
PCDHA10--PCDHAC1 25 0 12.50 0.00 PCDHA10^ENSG00000250120.8 3554 chr5:140858436:+ PCDHAC1^ENSG00000248383.5 21506 chr5:140978949:+ INCL_NON_REF_SPLICE YES 5 10 4.33 2.36 GT 1.9329 AG 1.3996 0.0423 1105 0
PCDHA10--PCDHAC1 6 0 3.00 0.00 PCDHA10^ENSG00000250120.8 2765 chr5:140857647:+ PCDHAC1^ENSG00000248383.5 21506 chr5:140978949:+ INCL_NON_REF_SPLICE YES 19 10 0.35 0.64 GT 1.9656 AG 1.3996 0.0102 1292 0
PCDHA10--PCDHAC2 25 0 12.50 0.00 PCDHA10^ENSG00000250120.8 3554 chr5:140858436:+ PCDHAC2^ENSG00000243232.6 20370 chr5:140978949:+ INCL_NON_REF_SPLICE YES 5 23 4.33 1.08 GT 1.9329 AG 1.3996 0.0423 1235 0
PCDHA10--PCDHAC2 6 0 3.00 0.00 PCDHA10^ENSG00000250120.8 2765 chr5:140857647:+ PCDHAC2^ENSG00000243232.6 20370 chr5:140978949:+ INCL_NON_REF_SPLICE YES 19 23 0.35 0.29 GT 1.9656 AG 1.3996 0.0102 1404 0
CRYZL2P--SEC16B 24 0 24.00 0.00 CRYZL2P^ENSG00000242193.11 8825 chr1:178026155:- SEC16B^ENSG00000120341.18 19663 chr1:177968039:- ONLY_REF_SPLICE YES 1 20 12.50 1.19 GT 1.9086 AG 1.5546 0.0813 2589 0
CRYZL2P--SEC16B 5 0 5.00 0.00 CRYZL2P^ENSG00000242193.11 11220 chr1:178022440:- SEC16B^ENSG00000120341.18 19663 chr1:177968039:- ONLY_REF_SPLICE YES 2 20 2.00 0.29 GT 1.9656 AG 1.5546 0.0169 2635 0
NDUFA9--C12orf4 22 0 22.00 0.00 NDUFA9^ENSG00000139180.11 3503 chr12:4654922:+ C12orf4^ENSG00000047621.12 39658 chr12:4491234:- ONLY_REF_SPLICE YES 679 109 0.03 0.21 GT 1.7465 AG 1.8892 0.0745 1550 0
GTF2A1L--STON1-GTF2A1L 16 0 16.00 0.00 GTF2A1L^ENSG00000242441.8 8867 chr2:48671680:+ STON1-GTF2A1L^ENSG00000068781.21 15563 chr2:48776280:+ ONLY_REF_SPLICE YES 47 16 0.35 1.00 GT 1.8256 AG 1.7819 0.0542 1034 0
DIP2B--PTRHD1 11 0 11.00 0.00 DIP2B^ENSG00000066084.13 3457 chr12:50640852:+ PTRHD1^ENSG00000184924.6 51526 chr2:24790581:- ONLY_REF_SPLICE YES 474 314 0.03 0.04 GT 1.9219 AG 1.8062 0.0372 4443 0
33 rows