File Info
- Filename
- 659_cRa-T1-TRNA-1_A23MVY2LT4_1.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0014_0015/A23MVY2LT4/nfcore_rnafusion__73d51683--20260607-225254/fusioninspector/659_cRa-T1-TRNA-1_A23MVY2LT4_1.FusionInspector.fusions.abridged.tsv
- Size
- 10.4 KB
- Workflow Run
- dev_rna_exp0014_exp0015-73d51683
- Published
- Jun 08, 2026 5:34 AM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| AFF1--C4orf36 | 158 | 3 | 158.00 | 3.00 | AFF1^ENSG00000172493.22 | 3385 | chr4:86948571:+ | C4orf36^ENSG00000163633.12 | 36230 | chr4:86891593:- | ONLY_REF_SPLICE | YES | 816 | 31 | 0.20 | 5.06 | GT | 1.8256 | AG | 1.6895 | 0.5446 | 2468 | 0 |
| AFF1--C4orf36 | 11 | 0 | 11.00 | 0.00 | AFF1^ENSG00000172493.22 | 3385 | chr4:86948571:+ | C4orf36^ENSG00000163633.12 | 38479 | chr4:86888275:- | ONLY_REF_SPLICE | YES | 816 | 138 | 0.01 | 0.09 | GT | 1.8256 | AG | 1.9086 | 0.0372 | 2415 | 0 |
| AFF1--C4orf36 | 1 | 0 | 1.00 | 0.00 | AFF1^ENSG00000172493.22 | 3385 | chr4:86948571:+ | C4orf36^ENSG00000163633.12 | 38861 | chr4:86887893:- | ONLY_REF_SPLICE | YES | 816 | 205 | 0.00 | 0.01 | GT | 1.8256 | AG | 1.7465 | 0.0034 | 2302 | 0 |
| TLK2--AC240565.1 | 155 | 1 | 150.65 | 1.00 | TLK2^ENSG00000146872.18 | 17137 | chr17:62560126:+ | AC240565.1^ENSG00000280136.2 | 41242 | chr17:106864:- | ONLY_REF_SPLICE | YES | 564 | 49 | 0.28 | 3.14 | GT | 1.8892 | AG | 1.8892 | 0.5131 | 1734 | 0 |
| AC092807.3--DDAH1 | 128 | 8 | 128.00 | 7.67 | AC092807.3^ENSG00000282057.1 | 5553 | chr1:85496166:- | DDAH1^ENSG00000153904.21 | 16212 | chr1:85358847:- | ONLY_REF_SPLICE | YES | 0 | 151 | 137.00 | 0.90 | GT | 1.5628 | AG | 1.8062 | 0.4589 | 3011 | 0 |
| AC092807.3--DDAH1 | 49 | 1 | 49.00 | 0.26 | AC092807.3^ENSG00000282057.1 | 1267 | chr1:85577984:- | DDAH1^ENSG00000153904.21 | 16212 | chr1:85358847:- | ONLY_REF_SPLICE | YES | 0 | 151 | 51.00 | 0.34 | GT | 1.8062 | AG | 1.8062 | 0.1667 | 2484 | 0 |
| AC092807.3--DDAH1 | 1 | 8 | 1.00 | 0.06 | AC092807.3^ENSG00000282057.1 | 9402 | chr1:85488291:- | DDAH1^ENSG00000153904.21 | 16212 | chr1:85358847:- | ONLY_REF_SPLICE | NO | 1 | 151 | 5.00 | 0.07 | GT | 1.8892 | AG | 1.8062 | 0.0036 | 2892 | 0 |
| AC092807.3--DDAH1 | 2 | 1 | 2.00 | 0.01 | AC092807.3^ENSG00000282057.1 | 3294 | chr1:85575832:- | DDAH1^ENSG00000153904.21 | 16212 | chr1:85358847:- | ONLY_REF_SPLICE | YES | 0 | 151 | 4.00 | 0.03 | GT | 1.6895 | AG | 1.8062 | 0.0068 | 3244 | 0 |
| PCDHGB2--PCDHGA10 | 114 | 0 | 14.25 | 0.00 | PCDHGB2^ENSG00000253910.2 | 3515 | chr5:141362556:+ | PCDHGA10^ENSG00000253846.2 | 12051 | chr5:141494807:+ | INCL_NON_REF_SPLICE | YES | 0 | 99 | 115.00 | 1.15 | GT | 1.7819 | AG | 1.3383 | 0.0482 | 1890 | 0 |
| PCDHGB2--PCDHGA11 | 114 | 0 | 14.25 | 0.00 | PCDHGB2^ENSG00000253910.2 | 3515 | chr5:141362556:+ | PCDHGA11^ENSG00000253873.6 | 11222 | chr5:141494807:+ | INCL_NON_REF_SPLICE | YES | 0 | 26 | 115.00 | 4.26 | GT | 1.7819 | AG | 1.3383 | 0.0482 | 1018 | 0 |
| PCDHGB2--PCDHGA12 | 114 | 0 | 14.25 | 0.00 | PCDHGB2^ENSG00000253910.2 | 3515 | chr5:141362556:+ | PCDHGA12^ENSG00000253159.3 | 10305 | chr5:141494807:+ | INCL_NON_REF_SPLICE | YES | 0 | 277 | 115.00 | 0.41 | GT | 1.7819 | AG | 1.3383 | 0.0482 | 1413 | 0 |
| PCDHGB2--PCDHGA8 | 114 | 0 | 14.25 | 0.00 | PCDHGB2^ENSG00000253910.2 | 3515 | chr5:141362556:+ | PCDHGA8^ENSG00000253767.3 | 14069 | chr5:141494807:+ | INCL_NON_REF_SPLICE | YES | 0 | 11 | 115.00 | 9.58 | GT | 1.7819 | AG | 1.3383 | 0.0482 | 1419 | 0 |
| PCDHGB2--PCDHGA9 | 114 | 0 | 14.25 | 0.00 | PCDHGB2^ENSG00000253910.2 | 3515 | chr5:141362556:+ | PCDHGA9^ENSG00000261934.2 | 10157 | chr5:141494807:+ | INCL_NON_REF_SPLICE | YES | 0 | 57 | 115.00 | 1.98 | GT | 1.7819 | AG | 1.3383 | 0.0482 | 1493 | 0 |
| PCDHGB2--PCDHGC3 | 114 | 0 | 14.25 | 0.00 | PCDHGB2^ENSG00000253910.2 | 3515 | chr5:141362556:+ | PCDHGC3^ENSG00000240184.7 | 10438 | chr5:141494807:+ | INCL_NON_REF_SPLICE | YES | 0 | 643 | 115.00 | 0.18 | GT | 1.7819 | AG | 1.3383 | 0.0482 | 1210 | 0 |
| PCDHGB2--PCDHGC4 | 114 | 0 | 14.25 | 0.00 | PCDHGB2^ENSG00000253910.2 | 3515 | chr5:141362556:+ | PCDHGC4^ENSG00000242419.5 | 10382 | chr5:141494807:+ | INCL_NON_REF_SPLICE | YES | 0 | 0 | 115.00 | 115.00 | GT | 1.7819 | AG | 1.3383 | 0.0482 | 1585 | 0 |
| PCDHGB2--PCDHGC5 | 114 | 0 | 14.25 | 0.00 | PCDHGB2^ENSG00000253910.2 | 3515 | chr5:141362556:+ | PCDHGC5^ENSG00000240764.4 | 10438 | chr5:141494807:+ | INCL_NON_REF_SPLICE | YES | 0 | 16 | 115.00 | 6.76 | GT | 1.7819 | AG | 1.3383 | 0.0482 | 1206 | 0 |
| TVP23C--CDRT4 | 105 | 4 | 105.00 | 3.61 | TVP23C^ENSG00000175106.17 | 14926 | chr17:15503098:- | CDRT4^ENSG00000239704.11 | 22624 | chr17:15440285:- | INCL_NON_REF_SPLICE | YES | 143 | 12 | 0.76 | 8.46 | GT | 1.9329 | AG | 1.9899 | 0.3674 | 1215 | 0 |
| TVP23C--CDRT4 | 54 | 1 | 54.00 | 0.31 | TVP23C^ENSG00000175106.17 | 7982 | chr17:15540433:- | CDRT4^ENSG00000239704.11 | 22624 | chr17:15440285:- | ONLY_REF_SPLICE | YES | 500 | 12 | 0.11 | 4.31 | GT | 1.8323 | AG | 1.9899 | 0.1837 | 2126 | 0 |
| TVP23C--CDRT4 | 20 | 0 | 20.00 | 0.00 | TVP23C^ENSG00000175106.17 | 14926 | chr17:15503098:- | CDRT4^ENSG00000239704.11 | 23702 | chr17:15438200:- | INCL_NON_REF_SPLICE | YES | 143 | 58 | 0.15 | 0.36 | GT | 1.9329 | AG | 1.6402 | 0.0677 | 137 | 0 |
| TVP23C--CDRT4 | 13 | 1 | 13.00 | 0.07 | TVP23C^ENSG00000175106.17 | 12676 | chr17:15516419:- | CDRT4^ENSG00000239704.11 | 22624 | chr17:15440285:- | ONLY_REF_SPLICE | YES | 27 | 12 | 0.54 | 1.15 | GT | 1.8892 | AG | 1.9899 | 0.0442 | 1949 | 0 |
| TVP23C--CDRT4 | 2 | 0 | 2.00 | 0.00 | TVP23C^ENSG00000175106.17 | 7982 | chr17:15540433:- | CDRT4^ENSG00000239704.11 | 23702 | chr17:15438200:- | ONLY_REF_SPLICE | YES | 500 | 58 | 0.01 | 0.05 | GT | 1.8323 | AG | 1.6402 | 0.0068 | 1363 | 0 |
| TVP23C--CDRT4 | 2 | 0 | 2.00 | 0.00 | TVP23C^ENSG00000175106.17 | 6853 | chr17:15545785:- | CDRT4^ENSG00000239704.11 | 22624 | chr17:15440285:- | ONLY_REF_SPLICE | YES | 391 | 12 | 0.01 | 0.23 | GT | 1.9086 | AG | 1.9899 | 0.0068 | 1774 | 0 |
| TVP23C--CDRT4 | 1 | 1 | 1.00 | 0.01 | TVP23C^ENSG00000175106.17 | 7982 | chr17:15540433:- | CDRT4^ENSG00000239704.11 | 21051 | chr17:15453085:- | ONLY_REF_SPLICE | YES | 500 | 3 | 0.01 | 0.75 | GT | 1.8323 | AG | 1.8892 | 0.0034 | 1044 | 0 |
| TVP23C--CDRT4 | 1 | 0 | 1.00 | 0.00 | TVP23C^ENSG00000175106.17 | 6853 | chr17:15545785:- | CDRT4^ENSG00000239704.11 | 23702 | chr17:15438200:- | ONLY_REF_SPLICE | YES | 391 | 58 | 0.01 | 0.03 | GT | 1.9086 | AG | 1.6402 | 0.0034 | 697 | 0 |
| TLK2P1--AC110079.1 | 85 | 0 | 76.35 | 0.00 | TLK2P1^ENSG00000226049.3 | 1830 | chr17:34039043:- | AC110079.1^ENSG00000260404.3 | 8316 | chr4:118595912:+ | INCL_NON_REF_SPLICE | YES | 41 | 116 | 2.05 | 0.74 | GT | 1.7465 | AG | 1.8892 | 0.2583 | 311 | 0 |
| AC015911.9--SLFN12L | 65 | 4 | 65.00 | 3.61 | AC015911.9^ENSG00000286030.2 | 1691 | chr17:35522279:- | SLFN12L^ENSG00000205045.11 | 6142 | chr17:35480195:- | ONLY_REF_SPLICE | YES | 0 | 65 | 70.00 | 1.06 | GT | 1.9329 | AG | 1.8892 | 0.2321 | 533 | 0 |
| AC015911.9--SLFN12L | 13 | 1 | 13.00 | 0.15 | AC015911.9^ENSG00000286030.2 | 1691 | chr17:35522279:- | SLFN12L^ENSG00000286065.2 | 8152 | chr17:35478185:- | ONLY_REF_SPLICE | YES | 0 | 75 | 15.00 | 0.20 | GT | 1.9329 | AG | 1.9329 | 0.0445 | 1380 | 0 |
| AC015911.9--SLFN12L | 3 | 5 | 3.00 | 1.22 | AC015911.9^ENSG00000286030.2 | 1691 | chr17:35522279:- | SLFN12L^ENSG00000205045.11 | 4635 | chr17:35487914:- | INCL_NON_REF_SPLICE | YES | 0 | 0 | 9.00 | 9.00 | GT | 1.9329 | AG | 1.7819 | 0.0142 | 1749 | 0 |
| AC015911.9--SLFN12L | 1 | 1 | 1.00 | 0.01 | AC015911.9^ENSG00000286030.2 | 1691 | chr17:35522279:- | SLFN12L^ENSG00000205045.11 | 9263 | chr17:35475485:- | ONLY_REF_SPLICE | YES | 0 | 124 | 3.00 | 0.02 | GT | 1.9329 | AG | 1.7968 | 0.0034 | 508 | 0 |
| MRPS18A--AC011447.3 | 60 | 0 | 60.00 | 0.00 | MRPS18A^ENSG00000096080.12 | 1124 | chr6:43687668:- | AC011447.3^ENSG00000267383.7 | 18727 | chr19:20176723:- | INCL_NON_REF_SPLICE | YES | 284 | 9 | 0.21 | 6.10 | GT | 1.7232 | AG | 1.7819 | 0.203 | 1001 | 0 |
| GLI1--SCNN1A | 40 | 1 | 40.00 | 1.00 | GLI1^ENSG00000111087.10 | 1417 | chr12:57460201:+ | SCNN1A^ENSG00000111319.13 | 18845 | chr12:6363710:- | ONLY_REF_SPLICE | YES | 33 | 2146 | 1.24 | 0.02 | GT | 1.5850 | AG | 1.9219 | 0.1387 | 356 | 0 |
| LEMD3--GRIP1 | 36 | 0 | 36.00 | 0.00 | LEMD3^ENSG00000174106.3 | 2536 | chr12:65171118:+ | GRIP1^ENSG00000155974.13 | 33166 | chr12:66465422:- | ONLY_REF_SPLICE | YES | 961 | 69 | 0.04 | 0.53 | GT | 1.8892 | AG | 1.9899 | 0.1218 | 711 | 0 |
| LEMD3--GRIP1 | 1 | 0 | 1.00 | 0.00 | LEMD3^ENSG00000174106.3 | 2536 | chr12:65171118:+ | GRIP1^ENSG00000155974.13 | 25400 | chr12:66596927:- | ONLY_REF_SPLICE | YES | 961 | 73 | 0.00 | 0.03 | GT | 1.8892 | AG | 1.9656 | 0.0034 | 3299 | 0 |
| LEMD3--GRIP1 | 1 | 0 | 1.00 | 0.00 | LEMD3^ENSG00000174106.3 | 2536 | chr12:65171118:+ | GRIP1^ENSG00000155974.13 | 34314 | chr12:66463093:- | ONLY_REF_SPLICE | YES | 961 | 60 | 0.00 | 0.03 | GT | 1.8892 | AG | 1.9656 | 0.0034 | 1218 | 0 |
| C2CD5--PTPRD | 29 | 0 | 29.00 | 0.00 | C2CD5^ENSG00000111731.12 | 12820 | chr12:22506711:- | PTPRD^ENSG00000153707.17 | 42609 | chr9:9574781:- | ONLY_REF_SPLICE | YES | 410 | 0 | 0.07 | 30.00 | GT | 1.9329 | AG | 1.7968 | 0.0981 | 2952 | 0 |
| NLRP2--ADAMTS13 | 29 | 0 | 29.00 | 0.00 | NLRP2^ENSG00000022556.16 | 1240 | chr19:54953369:+ | ADAMTS13^ENSG00000160323.19 | 27080 | chr9:133423101:+ | ONLY_REF_SPLICE | YES | 0 | 73 | 30.00 | 0.41 | GT | 1.7465 | AG | 1.8892 | 0.0981 | 938 | 0 |
| PCDHA11--PCDHAC2 | 28 | 0 | 28.00 | 0.00 | PCDHA11^ENSG00000249158.7 | 4312 | chr5:140871494:+ | PCDHAC2^ENSG00000243232.6 | 11430 | chr5:140978949:+ | INCL_NON_REF_SPLICE | YES | 16 | 67 | 1.71 | 0.43 | GT | 1.7819 | AG | 1.3996 | 0.0947 | 1466 | 0 |
| UBE2N--MRPL42 | 26 | 1 | 26.00 | 0.90 | UBE2N^ENSG00000177889.10 | 1093 | chr12:93441855:- | MRPL42^ENSG00000198015.14 | 15866 | chr12:93476954:+ | ONLY_REF_SPLICE | YES | 518 | 471 | 0.05 | 0.06 | GT | 1.9329 | AG | 1.7465 | 0.091 | 2865 | 0 |
| UBE2N--MRPL42 | 3 | 1 | 3.00 | 0.10 | UBE2N^ENSG00000177889.10 | 1093 | chr12:93441855:- | MRPL42^ENSG00000198015.14 | 16930 | chr12:93479388:+ | ONLY_REF_SPLICE | NO | 518 | 544 | 0.01 | 0.01 | GT | 1.9329 | AG | 1.9899 | 0.0104 | 2151 | 0 |
| UBE2N--MRPL42 | 2 | 0 | 2.00 | 0.00 | UBE2N^ENSG00000177889.10 | 1093 | chr12:93441855:- | MRPL42^ENSG00000198015.14 | 18015 | chr12:93487497:+ | ONLY_REF_SPLICE | YES | 518 | 452 | 0.01 | 0.01 | GT | 1.9329 | AG | 1.7232 | 0.0068 | 1817 | 0 |
| ERC1--GLI1 | 20 | 0 | 20.00 | 0.00 | ERC1^ENSG00000082805.20 | 1814 | chr12:991322:+ | GLI1^ENSG00000111087.10 | 46579 | chr12:57463665:+ | ONLY_REF_SPLICE | YES | 120 | 55 | 0.17 | 0.38 | GT | 1.7819 | AG | 1.5546 | 0.0677 | 1511 | 0 |
| ERC1--GLI1 | 10 | 0 | 10.00 | 0.00 | ERC1^ENSG00000082805.20 | 1979 | chr12:991487:+ | GLI1^ENSG00000111087.10 | 47587 | chr12:57464673:+ | ONLY_REF_SPLICE | YES | 162 | 126 | 0.07 | 0.09 | GT | 1.6049 | AG | 1.5628 | 0.0338 | 1147 | 0 |
| ERC1--GLI1 | 7 | 0 | 7.00 | 0.00 | ERC1^ENSG00000082805.20 | 3448 | chr12:998482:+ | GLI1^ENSG00000111087.10 | 46579 | chr12:57463665:+ | ONLY_REF_SPLICE | YES | 182 | 55 | 0.04 | 0.14 | GT | 1.8892 | AG | 1.5546 | 0.0237 | 2134 | 0 |
| ERC1--GLI1 | 4 | 0 | 4.00 | 0.00 | ERC1^ENSG00000082805.20 | 1121 | chr12:990629:+ | GLI1^ENSG00000111087.10 | 46579 | chr12:57463665:+ | ONLY_REF_SPLICE | YES | 12 | 55 | 0.38 | 0.09 | GT | 1.7968 | AG | 1.5546 | 0.0135 | 1709 | 0 |
| ERC1--GLI1 | 3 | 0 | 3.00 | 0.00 | ERC1^ENSG00000082805.20 | 1979 | chr12:991487:+ | GLI1^ENSG00000111087.10 | 46579 | chr12:57463665:+ | ONLY_REF_SPLICE | YES | 162 | 55 | 0.02 | 0.07 | GT | 1.6049 | AG | 1.5546 | 0.0101 | 1507 | 0 |
| ERC1--GLI1 | 3 | 0 | 3.00 | 0.00 | ERC1^ENSG00000082805.20 | 1814 | chr12:991322:+ | GLI1^ENSG00000111087.10 | 46913 | chr12:57463999:+ | ONLY_REF_SPLICE | YES | 120 | 124 | 0.03 | 0.03 | GT | 1.7819 | AG | 1.7819 | 0.0101 | 1839 | 0 |
| ERC1--GLI1 | 1 | 0 | 1.00 | 0.00 | ERC1^ENSG00000082805.20 | 1121 | chr12:990629:+ | GLI1^ENSG00000111087.10 | 47587 | chr12:57464673:+ | ONLY_REF_SPLICE | YES | 12 | 126 | 0.15 | 0.02 | GT | 1.7968 | AG | 1.5628 | 0.0034 | 1520 | 0 |
| CCDC198--NPIPB11 | 14 | 0 | 7.00 | 0.00 | CCDC198^ENSG00000100557.10 | 8353 | chr14:57475582:- | NPIPB11^ENSG00000254206.5 | 19926 | chr16:29385855:- | ONLY_REF_SPLICE | YES | 0 | 142 | 15.00 | 0.10 | GT | 1.9329 | AG | 1.8892 | 0.0237 | 1377 | 0 |
| PTPN2--NPIPB11 | 14 | 0 | 7.00 | 0.00 | PTPN2^ENSG00000175354.20 | 6203 | chr18:12869025:- | NPIPB11^ENSG00000254206.5 | 38131 | chr16:29385855:- | ONLY_REF_SPLICE | YES | 679 | 142 | 0.02 | 0.10 | GT | 1.9329 | AG | 1.8892 | 0.0237 | 1314 | 0 |
| SCNN1A--VWF | 10 | 0 | 10.00 | 0.00 | SCNN1A^ENSG00000111319.13 | 4236 | chr12:6374368:- | VWF^ENSG00000110799.14 | 23596 | chr12:6095584:- | ONLY_REF_SPLICE | YES | 2260 | 647 | 0.00 | 0.02 | GT | 1.7465 | AG | 1.9086 | 0.0338 | 1773 | 0 |
| WNK1--DGKA | 9 | 1 | 9.00 | 1.00 | WNK1^ENSG00000060237.19 | 2746 | chr12:754324:+ | DGKA^ENSG00000065357.20 | 53224 | chr12:55936423:+ | ONLY_REF_SPLICE | YES | 2343 | 144 | 0.00 | 0.08 | GT | 1.8892 | AG | 1.9219 | 0.0338 | 370 | 0 |
| WNK1--DGKA | 2 | 0 | 2.00 | 0.00 | WNK1^ENSG00000060237.19 | 2746 | chr12:754324:+ | DGKA^ENSG00000065357.20 | 53818 | chr12:55937017:+ | ONLY_REF_SPLICE | YES | 2343 | 382 | 0.00 | 0.01 | GT | 1.8892 | AG | 1.6895 | 0.0068 | 476 | 0 |
53 rows