#FusionName JunctionReadCount SpanningFragCount est_J est_S LeftGene LeftLocalBreakpoint LeftBreakpoint RightGene RightLocalBreakpoint RightBreakpoint SpliceType LargeAnchorSupport NumCounterFusionLeft NumCounterFusionRight FAR_left FAR_right LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy FFPM microh_brkpt_dist num_microh_near_brkpt AFF1--C4orf36 158 3 158.00 3.00 AFF1^ENSG00000172493.22 3385 chr4:86948571:+ C4orf36^ENSG00000163633.12 36230 chr4:86891593:- ONLY_REF_SPLICE YES 816 31 0.20 5.06 GT 1.8256 AG 1.6895 0.5446 2468 0 AFF1--C4orf36 11 0 11.00 0.00 AFF1^ENSG00000172493.22 3385 chr4:86948571:+ C4orf36^ENSG00000163633.12 38479 chr4:86888275:- ONLY_REF_SPLICE YES 816 138 0.01 0.09 GT 1.8256 AG 1.9086 0.0372 2415 0 AFF1--C4orf36 1 0 1.00 0.00 AFF1^ENSG00000172493.22 3385 chr4:86948571:+ C4orf36^ENSG00000163633.12 38861 chr4:86887893:- ONLY_REF_SPLICE YES 816 205 0.00 0.01 GT 1.8256 AG 1.7465 0.0034 2302 0 TLK2--AC240565.1 155 1 150.65 1.00 TLK2^ENSG00000146872.18 17137 chr17:62560126:+ AC240565.1^ENSG00000280136.2 41242 chr17:106864:- ONLY_REF_SPLICE YES 564 49 0.28 3.14 GT 1.8892 AG 1.8892 0.5131 1734 0 AC092807.3--DDAH1 128 8 128.00 7.67 AC092807.3^ENSG00000282057.1 5553 chr1:85496166:- DDAH1^ENSG00000153904.21 16212 chr1:85358847:- ONLY_REF_SPLICE YES 0 151 137.00 0.90 GT 1.5628 AG 1.8062 0.4589 3011 0 AC092807.3--DDAH1 49 1 49.00 0.26 AC092807.3^ENSG00000282057.1 1267 chr1:85577984:- DDAH1^ENSG00000153904.21 16212 chr1:85358847:- ONLY_REF_SPLICE YES 0 151 51.00 0.34 GT 1.8062 AG 1.8062 0.1667 2484 0 AC092807.3--DDAH1 1 8 1.00 0.06 AC092807.3^ENSG00000282057.1 9402 chr1:85488291:- DDAH1^ENSG00000153904.21 16212 chr1:85358847:- ONLY_REF_SPLICE NO 1 151 5.00 0.07 GT 1.8892 AG 1.8062 0.0036 2892 0 AC092807.3--DDAH1 2 1 2.00 0.01 AC092807.3^ENSG00000282057.1 3294 chr1:85575832:- DDAH1^ENSG00000153904.21 16212 chr1:85358847:- ONLY_REF_SPLICE YES 0 151 4.00 0.03 GT 1.6895 AG 1.8062 0.0068 3244 0 PCDHGB2--PCDHGA10 114 0 14.25 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA10^ENSG00000253846.2 12051 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 99 115.00 1.15 GT 1.7819 AG 1.3383 0.0482 1890 0 PCDHGB2--PCDHGA11 114 0 14.25 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA11^ENSG00000253873.6 11222 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 26 115.00 4.26 GT 1.7819 AG 1.3383 0.0482 1018 0 PCDHGB2--PCDHGA12 114 0 14.25 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA12^ENSG00000253159.3 10305 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 277 115.00 0.41 GT 1.7819 AG 1.3383 0.0482 1413 0 PCDHGB2--PCDHGA8 114 0 14.25 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA8^ENSG00000253767.3 14069 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 11 115.00 9.58 GT 1.7819 AG 1.3383 0.0482 1419 0 PCDHGB2--PCDHGA9 114 0 14.25 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA9^ENSG00000261934.2 10157 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 57 115.00 1.98 GT 1.7819 AG 1.3383 0.0482 1493 0 PCDHGB2--PCDHGC3 114 0 14.25 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC3^ENSG00000240184.7 10438 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 643 115.00 0.18 GT 1.7819 AG 1.3383 0.0482 1210 0 PCDHGB2--PCDHGC4 114 0 14.25 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC4^ENSG00000242419.5 10382 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 0 115.00 115.00 GT 1.7819 AG 1.3383 0.0482 1585 0 PCDHGB2--PCDHGC5 114 0 14.25 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC5^ENSG00000240764.4 10438 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 16 115.00 6.76 GT 1.7819 AG 1.3383 0.0482 1206 0 TVP23C--CDRT4 105 4 105.00 3.61 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- INCL_NON_REF_SPLICE YES 143 12 0.76 8.46 GT 1.9329 AG 1.9899 0.3674 1215 0 TVP23C--CDRT4 54 1 54.00 0.31 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 500 12 0.11 4.31 GT 1.8323 AG 1.9899 0.1837 2126 0 TVP23C--CDRT4 20 0 20.00 0.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- INCL_NON_REF_SPLICE YES 143 58 0.15 0.36 GT 1.9329 AG 1.6402 0.0677 137 0 TVP23C--CDRT4 13 1 13.00 0.07 TVP23C^ENSG00000175106.17 12676 chr17:15516419:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 27 12 0.54 1.15 GT 1.8892 AG 1.9899 0.0442 1949 0 TVP23C--CDRT4 2 0 2.00 0.00 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 500 58 0.01 0.05 GT 1.8323 AG 1.6402 0.0068 1363 0 TVP23C--CDRT4 2 0 2.00 0.00 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 391 12 0.01 0.23 GT 1.9086 AG 1.9899 0.0068 1774 0 TVP23C--CDRT4 1 1 1.00 0.01 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 21051 chr17:15453085:- ONLY_REF_SPLICE YES 500 3 0.01 0.75 GT 1.8323 AG 1.8892 0.0034 1044 0 TVP23C--CDRT4 1 0 1.00 0.00 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 391 58 0.01 0.03 GT 1.9086 AG 1.6402 0.0034 697 0 TLK2P1--AC110079.1 85 0 76.35 0.00 TLK2P1^ENSG00000226049.3 1830 chr17:34039043:- AC110079.1^ENSG00000260404.3 8316 chr4:118595912:+ INCL_NON_REF_SPLICE YES 41 116 2.05 0.74 GT 1.7465 AG 1.8892 0.2583 311 0 AC015911.9--SLFN12L 65 4 65.00 3.61 AC015911.9^ENSG00000286030.2 1691 chr17:35522279:- SLFN12L^ENSG00000205045.11 6142 chr17:35480195:- ONLY_REF_SPLICE YES 0 65 70.00 1.06 GT 1.9329 AG 1.8892 0.2321 533 0 AC015911.9--SLFN12L 13 1 13.00 0.15 AC015911.9^ENSG00000286030.2 1691 chr17:35522279:- SLFN12L^ENSG00000286065.2 8152 chr17:35478185:- ONLY_REF_SPLICE YES 0 75 15.00 0.20 GT 1.9329 AG 1.9329 0.0445 1380 0 AC015911.9--SLFN12L 3 5 3.00 1.22 AC015911.9^ENSG00000286030.2 1691 chr17:35522279:- SLFN12L^ENSG00000205045.11 4635 chr17:35487914:- INCL_NON_REF_SPLICE YES 0 0 9.00 9.00 GT 1.9329 AG 1.7819 0.0142 1749 0 AC015911.9--SLFN12L 1 1 1.00 0.01 AC015911.9^ENSG00000286030.2 1691 chr17:35522279:- SLFN12L^ENSG00000205045.11 9263 chr17:35475485:- ONLY_REF_SPLICE YES 0 124 3.00 0.02 GT 1.9329 AG 1.7968 0.0034 508 0 MRPS18A--AC011447.3 60 0 60.00 0.00 MRPS18A^ENSG00000096080.12 1124 chr6:43687668:- AC011447.3^ENSG00000267383.7 18727 chr19:20176723:- INCL_NON_REF_SPLICE YES 284 9 0.21 6.10 GT 1.7232 AG 1.7819 0.203 1001 0 GLI1--SCNN1A 40 1 40.00 1.00 GLI1^ENSG00000111087.10 1417 chr12:57460201:+ SCNN1A^ENSG00000111319.13 18845 chr12:6363710:- ONLY_REF_SPLICE YES 33 2146 1.24 0.02 GT 1.5850 AG 1.9219 0.1387 356 0 LEMD3--GRIP1 36 0 36.00 0.00 LEMD3^ENSG00000174106.3 2536 chr12:65171118:+ GRIP1^ENSG00000155974.13 33166 chr12:66465422:- ONLY_REF_SPLICE YES 961 69 0.04 0.53 GT 1.8892 AG 1.9899 0.1218 711 0 LEMD3--GRIP1 1 0 1.00 0.00 LEMD3^ENSG00000174106.3 2536 chr12:65171118:+ GRIP1^ENSG00000155974.13 25400 chr12:66596927:- ONLY_REF_SPLICE YES 961 73 0.00 0.03 GT 1.8892 AG 1.9656 0.0034 3299 0 LEMD3--GRIP1 1 0 1.00 0.00 LEMD3^ENSG00000174106.3 2536 chr12:65171118:+ GRIP1^ENSG00000155974.13 34314 chr12:66463093:- ONLY_REF_SPLICE YES 961 60 0.00 0.03 GT 1.8892 AG 1.9656 0.0034 1218 0 C2CD5--PTPRD 29 0 29.00 0.00 C2CD5^ENSG00000111731.12 12820 chr12:22506711:- PTPRD^ENSG00000153707.17 42609 chr9:9574781:- ONLY_REF_SPLICE YES 410 0 0.07 30.00 GT 1.9329 AG 1.7968 0.0981 2952 0 NLRP2--ADAMTS13 29 0 29.00 0.00 NLRP2^ENSG00000022556.16 1240 chr19:54953369:+ ADAMTS13^ENSG00000160323.19 27080 chr9:133423101:+ ONLY_REF_SPLICE YES 0 73 30.00 0.41 GT 1.7465 AG 1.8892 0.0981 938 0 PCDHA11--PCDHAC2 28 0 28.00 0.00 PCDHA11^ENSG00000249158.7 4312 chr5:140871494:+ PCDHAC2^ENSG00000243232.6 11430 chr5:140978949:+ INCL_NON_REF_SPLICE YES 16 67 1.71 0.43 GT 1.7819 AG 1.3996 0.0947 1466 0 UBE2N--MRPL42 26 1 26.00 0.90 UBE2N^ENSG00000177889.10 1093 chr12:93441855:- MRPL42^ENSG00000198015.14 15866 chr12:93476954:+ ONLY_REF_SPLICE YES 518 471 0.05 0.06 GT 1.9329 AG 1.7465 0.091 2865 0 UBE2N--MRPL42 3 1 3.00 0.10 UBE2N^ENSG00000177889.10 1093 chr12:93441855:- MRPL42^ENSG00000198015.14 16930 chr12:93479388:+ ONLY_REF_SPLICE NO 518 544 0.01 0.01 GT 1.9329 AG 1.9899 0.0104 2151 0 UBE2N--MRPL42 2 0 2.00 0.00 UBE2N^ENSG00000177889.10 1093 chr12:93441855:- MRPL42^ENSG00000198015.14 18015 chr12:93487497:+ ONLY_REF_SPLICE YES 518 452 0.01 0.01 GT 1.9329 AG 1.7232 0.0068 1817 0 ERC1--GLI1 20 0 20.00 0.00 ERC1^ENSG00000082805.20 1814 chr12:991322:+ GLI1^ENSG00000111087.10 46579 chr12:57463665:+ ONLY_REF_SPLICE YES 120 55 0.17 0.38 GT 1.7819 AG 1.5546 0.0677 1511 0 ERC1--GLI1 10 0 10.00 0.00 ERC1^ENSG00000082805.20 1979 chr12:991487:+ GLI1^ENSG00000111087.10 47587 chr12:57464673:+ ONLY_REF_SPLICE YES 162 126 0.07 0.09 GT 1.6049 AG 1.5628 0.0338 1147 0 ERC1--GLI1 7 0 7.00 0.00 ERC1^ENSG00000082805.20 3448 chr12:998482:+ GLI1^ENSG00000111087.10 46579 chr12:57463665:+ ONLY_REF_SPLICE YES 182 55 0.04 0.14 GT 1.8892 AG 1.5546 0.0237 2134 0 ERC1--GLI1 4 0 4.00 0.00 ERC1^ENSG00000082805.20 1121 chr12:990629:+ GLI1^ENSG00000111087.10 46579 chr12:57463665:+ ONLY_REF_SPLICE YES 12 55 0.38 0.09 GT 1.7968 AG 1.5546 0.0135 1709 0 ERC1--GLI1 3 0 3.00 0.00 ERC1^ENSG00000082805.20 1979 chr12:991487:+ GLI1^ENSG00000111087.10 46579 chr12:57463665:+ ONLY_REF_SPLICE YES 162 55 0.02 0.07 GT 1.6049 AG 1.5546 0.0101 1507 0 ERC1--GLI1 3 0 3.00 0.00 ERC1^ENSG00000082805.20 1814 chr12:991322:+ GLI1^ENSG00000111087.10 46913 chr12:57463999:+ ONLY_REF_SPLICE YES 120 124 0.03 0.03 GT 1.7819 AG 1.7819 0.0101 1839 0 ERC1--GLI1 1 0 1.00 0.00 ERC1^ENSG00000082805.20 1121 chr12:990629:+ GLI1^ENSG00000111087.10 47587 chr12:57464673:+ ONLY_REF_SPLICE YES 12 126 0.15 0.02 GT 1.7968 AG 1.5628 0.0034 1520 0 CCDC198--NPIPB11 14 0 7.00 0.00 CCDC198^ENSG00000100557.10 8353 chr14:57475582:- NPIPB11^ENSG00000254206.5 19926 chr16:29385855:- ONLY_REF_SPLICE YES 0 142 15.00 0.10 GT 1.9329 AG 1.8892 0.0237 1377 0 PTPN2--NPIPB11 14 0 7.00 0.00 PTPN2^ENSG00000175354.20 6203 chr18:12869025:- NPIPB11^ENSG00000254206.5 38131 chr16:29385855:- ONLY_REF_SPLICE YES 679 142 0.02 0.10 GT 1.9329 AG 1.8892 0.0237 1314 0 SCNN1A--VWF 10 0 10.00 0.00 SCNN1A^ENSG00000111319.13 4236 chr12:6374368:- VWF^ENSG00000110799.14 23596 chr12:6095584:- ONLY_REF_SPLICE YES 2260 647 0.00 0.02 GT 1.7465 AG 1.9086 0.0338 1773 0 WNK1--DGKA 9 1 9.00 1.00 WNK1^ENSG00000060237.19 2746 chr12:754324:+ DGKA^ENSG00000065357.20 53224 chr12:55936423:+ ONLY_REF_SPLICE YES 2343 144 0.00 0.08 GT 1.8892 AG 1.9219 0.0338 370 0 WNK1--DGKA 2 0 2.00 0.00 WNK1^ENSG00000060237.19 2746 chr12:754324:+ DGKA^ENSG00000065357.20 53818 chr12:55937017:+ ONLY_REF_SPLICE YES 2343 382 0.00 0.01 GT 1.8892 AG 1.6895 0.0068 476 0