Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cc/0a7fe19843059c9140812c1a29754b/659_bCu-T1-TRNA-1_A23MVY2LT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e2/669e6fb43331b45fc9447389768f85/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e2/669e6fb43331b45fc9447389768f85/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory