Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/19/0bde4fb10869b3a538bd4522ad05b3/.command.sh
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b3/a257fa51d0642111fba1167a749c0d/659_bua-T1-TRNA-1_A23MVY2LT4_1.features.csv
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/19/0bde4fb10869b3a538bd4522ad05b3/.command.run
==> STAGING COMPLETE (3 inputs)
Predicting contamination for 1 sample(s)...
Detection threshold: VAF_p90 < 0.9999
Level estimation: contamination_pct = -215.87 * vaf_p90 + 215.65
659_bua-T1-TRNA-1_A23MVY2LT4_1: vaf_p90=1.000000 -> CLEAN
Output saved to: 659_bua-T1-TRNA-1_A23MVY2LT4_1.predictions.csv
Summary: 0/1 samples flagged as contaminated