NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (659_bQZ-T1-TRNA-1_A23MVY2LT4_1) - dev_rna_exp0014_exp0015-73d51683 - Workflow Tracker

Runs
dev_rna_exp0..15-73d51683
Tasks
GATK4_MARKDUPLICATES (659_bQZ-T1-TRNA-1_A23MVY2LT4_1)

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Task Info

Status: succeeded
Hash: 0fdf6748f76d
Process: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES
Tag: 659_bQZ-T1-TRNA-1_A23MVY2LT4_1
Attempts: 1

Attempt 1

Execution

Status: succeeded
Hash: e6/8bbe66
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e6/8bbe66d59a7eace64d482eecd90ce8
Native ID: nf-e68bbe66d59a7eace64d482eecd90ce8-e829c

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.5 / 2
Memory (peak / alloc): 60.9 GB / 74.0 GB
Process I/O (rchar / wchar): 58.0 GB / 40.7 GB
Disk I/O (read / write): 20.7 GB / 40.7 GB
Host: i-09fa9c88db57f6242 ( spot)

Runtime

Submitted: Jun 08, 2026 1:50:37 AM
Completed: Jun 08, 2026 2:34:18 AM
Total Duration: 43m 40s

Phases

Queue: 1s
Execution: 41m 41s
Stage/Unstage: 1m 58s