Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5e/e5f83ca627bb91307d129971d89752/PX_FFPE_bld_TRNA_nat_04_A23MVY2LT4_1_1.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/91/4571f3e978487bf3c0092fadffa13e/PX_FFPE_bld_TRNA_nat_04_A23MVY2LT4_1.Chimeric.out.junction
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ca/1fb82fa069ac7d1363692e7e2f9f64/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ca/1fb82fa069ac7d1363692e7e2f9f64/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5e/e5f83ca627bb91307d129971d89752/PX_FFPE_bld_TRNA_nat_04_A23MVY2LT4_1_2.fastp.fastq.gz
==> STAGING COMPLETE (6 inputs)

-ctat genome lib [/tmp/nxf.XgHQzd6GtV/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.XgHQzd6GtV/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.XgHQzd6GtV/./star-fusion.preliminary
-sample contains 295059015 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.XgHQzd6GtV/ctat_genome_lib_build_dir  -J /tmp/nxf.XgHQzd6GtV/PX_FFPE_bld_TRNA_nat_04_A23MVY2LT4_1.Chimeric.out.junction  -O /tmp/nxf.XgHQzd6GtV/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.XgHQzd6GtV/PX_FFPE_bld_TRNA_nat_04_A23MVY2LT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.XgHQzd6GtV/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.12 min).
-mapping reads to genes

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[2910000], rate=54871.15/min -building interval tree based on /tmp/nxf.XgHQzd6GtV/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.12 min).
-mapping reads to genes

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[2320000], rate=51422.24/min 
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[2490000], rate=51024.59/min 
[2500000], rate=50933.79/min 
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[2570000], rate=50590.55/min 
[2580000], rate=50538.69/min 
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[2680000], rate=50613.79/min 
[2690000], rate=50627.35/min 
[2700000], rate=50688.36/min 
[2710000], rate=50733.23/min 
-building interval tree based on /tmp/nxf.XgHQzd6GtV/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.13 min).
-mapping reads to genes

[10000], rate=42857.14/min 
[20000], rate=46153.85/min 
[30000], rate=47368.42/min 
[40000], rate=52173.91/min 
[50000], rate=53571.43/min 
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[100000], rate=26785.71/min 
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[2680000], rate=48390.01/min 
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[2770000], rate=51028.55/min 
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[2800000], rate=51203.90/min 
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[2820000], rate=51350.53/min 
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[2840000], rate=51495.92/min 
[2850000], rate=51583.71/min 
[2860000], rate=51655.63/min 
[2870000], rate=51742.79/min 
[2880000], rate=51829.63/min 
[2890000], rate=51916.17/min 
[2900000], rate=52002.39/min 
[2910000], rate=52088.31/min [2720000], rate=48803.83/min 
[2730000], rate=48910.12/min 
[2740000], rate=49001.49/min 
[2750000], rate=49092.53/min 
[2760000], rate=49197.86/min 
[2770000], rate=49302.88/min 
[2780000], rate=49422.22/min 
[2790000], rate=49555.95/min 
[2800000], rate=49689.44/min 
[2810000], rate=49793.27/min 
[2820000], rate=49911.50/min 
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[2850000], rate=50220.26/min 
[2860000], rate=50322.58/min 
[2870000], rate=50424.60/min 
[2880000], rate=50526.32/min 
[2890000], rate=50627.74/min 
[2900000], rate=50743.66/min 
[2910000], rate=50844.50/min -building interval tree based on /tmp/nxf.XgHQzd6GtV/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

[10000], rate=50000.00/min 
[20000], rate=57142.86/min 
[30000], rate=62068.97/min 
[40000], rate=63157.89/min 
[50000], rate=61224.49/min 
[60000], rate=70588.24/min 
[70000], rate=82352.94/min 
[80000], rate=82758.62/min 
[90000], rate=79411.76/min 
[100000], rate=76923.08/min 
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[1110000], rate=23368.42/min 
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[1200000], rate=24665.98/min 
[1210000], rate=24812.03/min 
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[1230000], rate=25110.58/min 
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[1310000], rate=26322.84/min 
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[1360000], rate=26877.47/min 
[1370000], rate=26977.35/min 
[1380000], rate=27085.38/min 
[1390000], rate=27192.70/min 
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[1410000], rate=27414.13/min 
[1420000], rate=27528.27/min 
[1430000], rate=27632.85/min 
[1440000], rate=27754.58/min 
[1450000], rate=27884.62/min 
[1460000], rate=28014.07/min 
[1470000], rate=28151.93/min 
[1480000], rate=28280.25/min 
[1490000], rate=28408.01/min 
[1500000], rate=28535.19/min 
[1510000], rate=28661.82/min 
[1520000], rate=28787.88/min 
[1530000], rate=28922.50/min 
[1540000], rate=29056.60/min 
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[1570000], rate=29455.91/min 
[1580000], rate=29597.25/min 
[1590000], rate=29728.89/min 
[1600000], rate=29860.03/min 
[1610000], rate=29990.69/min 
[1620000], rate=30120.86/min 
[1630000], rate=30259.90/min 
[1640000], rate=30398.52/min 
[1650000], rate=30536.71/min 
[1660000], rate=30674.47/min 
[1670000], rate=30802.34/min 
[1680000], rate=30948.73/min 
[1690000], rate=31085.22/min 
[1700000], rate=31230.86/min 
[1710000], rate=31366.55/min 
[1720000], rate=31511.45/min 
[1730000], rate=31655.99/min 
[1740000], rate=31790.50/min 
[1750000], rate=31876.14/min 
[1760000], rate=31951.59/min 
[1770000], rate=32016.88/min 
[1780000], rate=32081.71/min 
[1790000], rate=32146.06/min 
[1800000], rate=32209.96/min 
[1810000], rate=32283.00/min 
[1820000], rate=32355.56/min 
[1830000], rate=32418.07/min 
[1840000], rate=32499.26/min 
[1850000], rate=32570.42/min 
[1860000], rate=32641.12/min 
[1870000], rate=32720.91/min 
[1880000], rate=32800.23/min 
[1890000], rate=32898.17/min 
[1900000], rate=32976.57/min 
[1910000], rate=33054.51/min 
[1920000], rate=33132.01/min 
[1930000], rate=33218.59/min 
[1940000], rate=33314.25/min 
[1950000], rate=33390.41/min 
[1960000], rate=33485.19/min 
[1970000], rate=33589.09/min 
[1980000], rate=33692.57/min 
[1990000], rate=33795.64/min 
[2000000], rate=33898.31/min 
[2010000], rate=34010.15/min 
[2020000], rate=34112.02/min 
[2030000], rate=34223.10/min 
[2040000], rate=34314.55/min 
[2050000], rate=34395.97/min 
[2060000], rate=34476.99/min 
[2070000], rate=34567.21/min 
[2080000], rate=34647.42/min 
[2090000], rate=34736.84/min 
[2100000], rate=34835.50/min 
[2110000], rate=34914.51/min 
[2120000], rate=35012.39/min 
[2130000], rate=35100.25/min 
[2140000], rate=35197.37/min 
[2150000], rate=35294.12/min 
[2160000], rate=35390.50/min 
[2170000], rate=35496.18/min 
[2180000], rate=35591.84/min 
[2190000], rate=35687.13/min 
[2200000], rate=35801.46/min 
[2210000], rate=35915.49/min 
[2220000], rate=36029.21/min 
[2230000], rate=36152.39/min 
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[2270000], rate=36612.90/min 
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[2300000], rate=36957.69/min 
[2310000], rate=37068.73/min 
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[2340000], rate=37420.04/min 
[2350000], rate=37539.94/min 
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[2380000], rate=37688.04/min 
[2390000], rate=37716.99/min 
[2400000], rate=37755.64/min 
[2410000], rate=37803.92/min 
[2420000], rate=37842.06/min 
[2430000], rate=37879.97/min 
[2440000], rate=37927.46/min 
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[2480000], rate=38153.85/min 
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[2780000], rate=40241.25/min 
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[2870000], rate=41088.05/min 
[2880000], rate=41182.08/min 
[2890000], rate=41285.71/min 
[2900000], rate=41399.00/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.XgHQzd6GtV/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.XgHQzd6GtV/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.XgHQzd6GtV/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.XgHQzd6GtV/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.XgHQzd6GtV/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 0.00 reads per min processed...  
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 5000000.00 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.XgHQzd6GtV/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.XgHQzd6GtV/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.XgHQzd6GtV/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.XgHQzd6GtV/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.XgHQzd6GtV/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.XgHQzd6GtV/PX_FFPE_bld_TRNA_nat_04_A23MVY2LT4_1.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.XgHQzd6GtV/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.XgHQzd6GtV/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.XgHQzd6GtV/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -491649.924046
EM: Round [1] log likelihood: -491399.362752
EM: Round [2] log likelihood: -491310.279621
EM: Round [3] log likelihood: -491269.293623
EM: Round [4] log likelihood: -491247.892485
EM: Round [5] log likelihood: -491235.861247
EM: Round [6] log likelihood: -491228.700596
EM: Round [7] log likelihood: -491224.206760
EM: Round [8] log likelihood: -491221.236482
EM: Round [9] log likelihood: -491219.172869
EM: Round [10] log likelihood: -491217.671516
EM: Round [11] log likelihood: -491216.533532
EM: Round [12] log likelihood: -491215.639967
EM: Round [13] log likelihood: -491214.917078
EM: Round [14] log likelihood: -491214.317488
EM: Round [15] log likelihood: -491213.809702
EM: Round [16] log likelihood: -491213.372108
EM: Round [17] log likelihood: -491212.989445
EM: Round [18] log likelihood: -491212.650657
EM: Round [19] log likelihood: -491212.347554
EM: Round [20] log likelihood: -491212.073940
EM: Round [21] log likelihood: -491211.825052
EM: Round [22] log likelihood: -491211.597164
EM: Round [23] log likelihood: -491211.387318
EM: Round [24] log likelihood: -491211.193138
EM: Round [25] log likelihood: -491211.012691
EM: Round [26] log likelihood: -491210.844384
EM: Round [27] log likelihood: -491210.686893
EM: Round [28] log likelihood: -491210.539106
EM: Round [29] log likelihood: -491210.400078
EM: Round [30] log likelihood: -491210.269002
EM: Round [31] log likelihood: -491210.145183
EM: Round [32] log likelihood: -491210.028015
EM: Round [33] log likelihood: -491209.916970
EM: Round [34] log likelihood: -491209.811579
EM: Round [35] log likelihood: -491209.711431
EM: Round [36] log likelihood: -491209.616155
EM: Round [37] log likelihood: -491209.525422
EM: Round [38] log likelihood: -491209.438934
EM: Round [39] log likelihood: -491209.356421
EM: Round [40] log likelihood: -491209.277637
EM: Round [41] log likelihood: -491209.202361
EM: Round [42] log likelihood: -491209.130386
EM: Round [43] log likelihood: -491209.061525
EM: Round [44] log likelihood: -491208.995604
EM: Round [45] log likelihood: -491208.932463
EM: Round [46] log likelihood: -491208.871955
EM: Round [47] log likelihood: -491208.813940
EM: Round [48] log likelihood: -491208.758290
EM: Round [49] log likelihood: -491208.704887
EM: Round [50] log likelihood: -491208.653618
EM: Round [51] log likelihood: -491208.604378
EM: Round [52] log likelihood: -491208.557070
EM: Round [53] log likelihood: -491208.511601
EM: Round [54] log likelihood: -491208.467885
EM: Round [55] log likelihood: -491208.425840
EM: Round [56] log likelihood: -491208.385390
EM: Round [57] log likelihood: -491208.346462
EM: Round [58] log likelihood: -491208.308987
EM: Round [59] log likelihood: -491208.272902
EM: Round [60] log likelihood: -491208.238144
EM: Round [61] log likelihood: -491208.204656
EM: Round [62] log likelihood: -491208.172384
EM: Round [63] log likelihood: -491208.141274
EM: Round [64] log likelihood: -491208.111278
EM: Round [65] log likelihood: -491208.082349
EM: Round [66] log likelihood: -491208.054443
EM: Round [67] log likelihood: -491208.027516
EM: Round [68] log likelihood: -491208.001529
EM: Round [69] log likelihood: -491207.976443
EM: Round [70] log likelihood: -491207.952222
EM: Round [71] log likelihood: -491207.928831
EM: Round [72] log likelihood: -491207.906237
EM: Round [73] log likelihood: -491207.884409
EM: Round [74] log likelihood: -491207.863315
EM: Round [75] log likelihood: -491207.842928
EM: Round [76] log likelihood: -491207.823220
EM: Round [77] log likelihood: -491207.804165
EM: Round [78] log likelihood: -491207.785737
EM: Round [79] log likelihood: -491207.767913
EM: Round [80] log likelihood: -491207.750670
EM: Round [81] log likelihood: -491207.733986
EM: Round [82] log likelihood: -491207.717840
EM: Round [83] log likelihood: -491207.702211
EM: Round [84] log likelihood: -491207.687082
EM: Round [85] log likelihood: -491207.672432
EM: Round [86] log likelihood: -491207.658245
EM: Round [87] log likelihood: -491207.644504
EM: Round [88] log likelihood: -491207.631193
EM: Round [89] log likelihood: -491207.618296
EM: Round [90] log likelihood: -491207.605798
EM: Round [91] log likelihood: -491207.593684
EM: Round [92] log likelihood: -491207.581943
EM: Round [93] log likelihood: -491207.570559
EM: Round [94] log likelihood: -491207.559521
EM: Round [95] log likelihood: -491207.548816
EM: Round [96] log likelihood: -491207.538433
EM: Round [97] log likelihood: -491207.528361
EM: Round [98] log likelihood: -491207.518588
EM: Round [99] log likelihood: -491207.509105
EM: Round [100] log likelihood: -491207.499902
EM: Round [101] log likelihood: -491207.490969
EM: Round [102] log likelihood: -491207.482297
EM: Round [103] log likelihood: -491207.473877
EM: Round [104] log likelihood: -491207.465700
EM: Round [105] log likelihood: -491207.457760
EM: Round [106] log likelihood: -491207.450046
EM: Round [107] log likelihood: -491207.442553
EM: Round [108] log likelihood: -491207.435273
EM: Round [109] log likelihood: -491207.428199
EM: Round [110] log likelihood: -491207.421323
EM: Round [111] log likelihood: -491207.414641
EM: Round [112] log likelihood: -491207.408144
EM: Round [113] log likelihood: -491207.401828
EM: Round [114] log likelihood: -491207.395687
EM: Round [115] log likelihood: -491207.389714
EM: Round [116] log likelihood: -491207.383905
EM: Round [117] log likelihood: -491207.378254
EM: Round [118] log likelihood: -491207.372756
EM: Round [119] log likelihood: -491207.367407
EM: Round [120] log likelihood: -491207.362201
EM: Round [121] log likelihood: -491207.357135
EM: Round [122] log likelihood: -491207.352204
EM: Round [123] log likelihood: -491207.347403
EM: Round [124] log likelihood: -491207.342729
EM: Round [125] log likelihood: -491207.338178
EM: Round [126] log likelihood: -491207.333746
EM: Round [127] log likelihood: -491207.329429
EM: Round [128] log likelihood: -491207.325224
EM: Round [129] log likelihood: -491207.321127
EM: Round [130] log likelihood: -491207.317136
EM: Round [131] log likelihood: -491207.313246
EM: Round [132] log likelihood: -491207.309456
EM: Round [133] log likelihood: -491207.305761
EM: Round [134] log likelihood: -491207.302160
EM: Round [135] log likelihood: -491207.298648
EM: Round [136] log likelihood: -491207.295225
EM: Round [137] log likelihood: -491207.291887
EM: Round [138] log likelihood: -491207.288631
EM: Round [139] log likelihood: -491207.285456
EM: Round [140] log likelihood: -491207.282358
EM: Round [141] log likelihood: -491207.279336
EM: Round [142] log likelihood: -491207.276387
EM: Round [143] log likelihood: -491207.273510
EM: Round [144] log likelihood: -491207.270702
EM: Round [145] log likelihood: -491207.267961
EM: Round [146] log likelihood: -491207.265286
EM: Round [147] log likelihood: -491207.262674
EM: Round [148] log likelihood: -491207.260124
EM: Round [149] log likelihood: -491207.257634
EM: Round [150] log likelihood: -491207.255202
EM: Round [151] log likelihood: -491207.252827
EM: Round [152] log likelihood: -491207.250508
EM: Round [153] log likelihood: -491207.248241
EM: Round [154] log likelihood: -491207.246027
EM: Round [155] log likelihood: -491207.243864
EM: Round [156] log likelihood: -491207.241750
EM: Round [157] log likelihood: -491207.239683
EM: Round [158] log likelihood: -491207.237664
EM: Round [159] log likelihood: -491207.235690
EM: Round [160] log likelihood: -491207.233760
EM: Round [161] log likelihood: -491207.231873
EM: Round [162] log likelihood: -491207.230028
EM: Round [163] log likelihood: -491207.228224
EM: Round [164] log likelihood: -491207.226459
EM: Round [165] log likelihood: -491207.224733
EM: Round [166] log likelihood: -491207.223045
EM: Round [167] log likelihood: -491207.221393
EM: Round [168] log likelihood: -491207.219777
EM: Round [169] log likelihood: -491207.218196
EM: Round [170] log likelihood: -491207.216648
EM: Round [171] log likelihood: -491207.215134
EM: Round [172] log likelihood: -491207.213652
EM: Round [173] log likelihood: -491207.212201
EM: Round [174] log likelihood: -491207.210780
EM: Round [175] log likelihood: -491207.209389
EM: Round [176] log likelihood: -491207.208028
EM: Round [177] log likelihood: -491207.206694
EM: Round [178] log likelihood: -491207.205388
EM: Round [179] log likelihood: -491207.204109
EM: Round [180] log likelihood: -491207.202857
EM: Round [181] log likelihood: -491207.201629
EM: Round [182] log likelihood: -491207.200427
EM: Round [183] log likelihood: -491207.199249
EM: Round [184] log likelihood: -491207.198095
EM: Round [185] log likelihood: -491207.196964
EM: Round [186] log likelihood: -491207.195855
EM: Round [187] log likelihood: -491207.194769
EM: Round [188] log likelihood: -491207.193704
EM: Round [189] log likelihood: -491207.192660
EM: Round [190] log likelihood: -491207.191637
EM: Round [191] log likelihood: -491207.190634
EM: Round [192] log likelihood: -491207.189650
EM: Round [193] log likelihood: -491207.188686
EM: Round [194] log likelihood: -491207.187740
EM: Round [195] log likelihood: -491207.186812
EM: Round [196] log likelihood: -491207.185902
EM: Round [197] log likelihood: -491207.185009
EM: Round [198] log likelihood: -491207.184134
EM: Round [199] log likelihood: -491207.183275
EM: Round [200] log likelihood: -491207.182432
EM: Round [201] log likelihood: -491207.181605
EM: Round [202] log likelihood: -491207.180794
EM: Round [203] log likelihood: -491207.179998
EM: Round [204] log likelihood: -491207.179216
EM: Round [205] log likelihood: -491207.178450
EM: Round [206] log likelihood: -491207.177697
EM: Round [207] log likelihood: -491207.176958
EM: Round [208] log likelihood: -491207.176233
EM: Round [209] log likelihood: -491207.175520
EM: Round [210] log likelihood: -491207.174821
EM: Round [211] log likelihood: -491207.174135
EM: Round [212] log likelihood: -491207.173461
EM: Round [213] log likelihood: -491207.172799
EM: Round [214] log likelihood: -491207.172149
EM: Round [215] log likelihood: -491207.171510
EM: Round [216] log likelihood: -491207.170883
EM: Round [217] log likelihood: -491207.170267
EM: Round [218] log likelihood: -491207.169662
EM: Round [219] log likelihood: -491207.169068
EM: Round [220] log likelihood: -491207.168484
EM: Round [221] log likelihood: -491207.167911
EM: Round [222] log likelihood: -491207.167347
EM: Round [223] log likelihood: -491207.166793
EM: Round [224] log likelihood: -491207.166249
EM: Round [225] log likelihood: -491207.165714
EM: Round [226] log likelihood: -491207.165188
EM: Round [227] log likelihood: -491207.164672
EM: Round [228] log likelihood: -491207.164164
EM: Round [229] log likelihood: -491207.163665
EM: Round [230] log likelihood: -491207.163175
EM: Round [231] log likelihood: -491207.162692
EM: Round [232] log likelihood: -491207.162218
EM: Round [233] log likelihood: -491207.161752
EM: Round [234] log likelihood: -491207.161294
EM: Round [235] log likelihood: -491207.160843
EM: Round [236] log likelihood: -491207.160400
EM: Round [237] log likelihood: -491207.159965
EM: Round [238] log likelihood: -491207.159536
EM: Round [239] log likelihood: -491207.159115
EM: Round [240] log likelihood: -491207.158701
EM: Round [241] log likelihood: -491207.158294
EM: Round [242] log likelihood: -491207.157893
EM: Round [243] log likelihood: -491207.157499
EM: Round [244] log likelihood: -491207.157111
EM: Round [245] log likelihood: -491207.156729
EM: Round [246] log likelihood: -491207.156354
EM: Round [247] log likelihood: -491207.155985
EM: Round [248] log likelihood: -491207.155622
EM: Round [249] log likelihood: -491207.155265
EM: Round [250] log likelihood: -491207.154913
EM: Round [251] log likelihood: -491207.154567
EM: Round [252] log likelihood: -491207.154227
EM: Round [253] log likelihood: -491207.153892
EM: Round [254] log likelihood: -491207.153563
EM: Round [255] log likelihood: -491207.153239
EM: Round [256] log likelihood: -491207.152919
EM: Round [257] log likelihood: -491207.152605
EM: Round [258] log likelihood: -491207.152296
EM: Round [259] log likelihood: -491207.151992
EM: Round [260] log likelihood: -491207.151693
EM: Round [261] log likelihood: -491207.151398
EM: Round [262] log likelihood: -491207.151108
EM: Round [263] log likelihood: -491207.150822
EM: Round [264] log likelihood: -491207.150541
EM: Round [265] log likelihood: -491207.150264
EM: Round [266] log likelihood: -491207.149992
EM: Round [267] log likelihood: -491207.149724
EM: Round [268] log likelihood: -491207.149460
EM: Round [269] log likelihood: -491207.149200
EM: Round [270] log likelihood: -491207.148944
EM: Round [271] log likelihood: -491207.148692
EM: Round [272] log likelihood: -491207.148444
EM: Round [273] log likelihood: -491207.148199
EM: Round [274] log likelihood: -491207.147959
EM: Round [275] log likelihood: -491207.147722
EM: Round [276] log likelihood: -491207.147488
EM: Round [277] log likelihood: -491207.147258
EM: Round [278] log likelihood: -491207.147032
EM: Round [279] log likelihood: -491207.146809
EM: Round [280] log likelihood: -491207.146590
EM: Round [281] log likelihood: -491207.146374
EM: Round [282] log likelihood: -491207.146161
EM: Round [283] log likelihood: -491207.145951
EM: Round [284] log likelihood: -491207.145744
EM: Round [285] log likelihood: -491207.145541
EM: Round [286] log likelihood: -491207.145341
EM: Round [287] log likelihood: -491207.145143
EM: Round [288] log likelihood: -491207.144949
EM: Round [289] log likelihood: -491207.144757
EM: Round [290] log likelihood: -491207.144568
EM: Round [291] log likelihood: -491207.144383
EM: Round [292] log likelihood: -491207.144199
EM: Round [293] log likelihood: -491207.144019
EM: Round [294] log likelihood: -491207.143841
EM: Round [295] log likelihood: -491207.143666
EM: Round [296] log likelihood: -491207.143493
EM: Round [297] log likelihood: -491207.143323
EM: Round [298] log likelihood: -491207.143156
EM: Round [299] log likelihood: -491207.142991
EM: Round [300] log likelihood: -491207.142828
EM: Round [301] log likelihood: -491207.142668
EM: Round [302] log likelihood: -491207.142510
EM: Round [303] log likelihood: -491207.142354
EM: Round [304] log likelihood: -491207.142201
EM: Round [305] log likelihood: -491207.142050
EM: Round [306] log likelihood: -491207.141901
EM: Round [307] log likelihood: -491207.141754
EM: Round [308] log likelihood: -491207.141610
EM: Round [309] log likelihood: -491207.141467
EM: Round [310] log likelihood: -491207.141327
EM: Round [311] log likelihood: -491207.141188
EM: Round [312] log likelihood: -491207.141052
EM: Round [313] log likelihood: -491207.140918
EM: Round [314] log likelihood: -491207.140785
EM: Round [315] log likelihood: -491207.140655
EM: Round [316] log likelihood: -491207.140526
EM: Round [317] log likelihood: -491207.140399
EM: Round [318] log likelihood: -491207.140274
EM: Round [319] log likelihood: -491207.140151
EM: Round [320] log likelihood: -491207.140029
EM: Round [321] log likelihood: -491207.139909
EM: Round [322] log likelihood: -491207.139791
EM: Round [323] log likelihood: -491207.139675
EM: Round [324] log likelihood: -491207.139560
EM: Round [325] log likelihood: -491207.139447
EM: Round [326] log likelihood: -491207.139336
EM: Round [327] log likelihood: -491207.139226
EM: Round [328] log likelihood: -491207.139118
EM: Round [329] log likelihood: -491207.139011
EM: Round [330] log likelihood: -491207.138905
EM: Round [331] log likelihood: -491207.138802
EM: Round [332] log likelihood: -491207.138699
EM: Round [333] log likelihood: -491207.138598
EM: Round [334] log likelihood: -491207.138499
EM: Stopping iterations at round 334 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -490847.142970
EM: Round [1] log likelihood: -490636.868443
EM: Round [2] log likelihood: -490565.477760
EM: Round [3] log likelihood: -490533.707455
EM: Round [4] log likelihood: -490517.474914
EM: Round [5] log likelihood: -490508.522834
EM: Round [6] log likelihood: -490503.323392
EM: Round [7] log likelihood: -490500.167740
EM: Round [8] log likelihood: -490498.169748
EM: Round [9] log likelihood: -490496.850634
EM: Round [10] log likelihood: -490495.943627
EM: Round [11] log likelihood: -490495.295773
EM: Round [12] log likelihood: -490494.816727
EM: Round [13] log likelihood: -490494.451429
EM: Round [14] log likelihood: -490494.165231
EM: Round [15] log likelihood: -490493.935631
EM: Round [16] log likelihood: -490493.747576
EM: Round [17] log likelihood: -490493.590714
EM: Round [18] log likelihood: -490493.457751
EM: Round [19] log likelihood: -490493.343431
EM: Round [20] log likelihood: -490493.243893
EM: Round [21] log likelihood: -490493.156254
EM: Round [22] log likelihood: -490493.078324
EM: Round [23] log likelihood: -490493.008418
EM: Round [24] log likelihood: -490492.945222
EM: Round [25] log likelihood: -490492.887699
EM: Round [26] log likelihood: -490492.835020
EM: Round [27] log likelihood: -490492.786519
EM: Round [28] log likelihood: -490492.741650
EM: Round [29] log likelihood: -490492.699966
EM: Round [30] log likelihood: -490492.661095
EM: Round [31] log likelihood: -490492.624727
EM: Round [32] log likelihood: -490492.590597
EM: Round [33] log likelihood: -490492.558482
EM: Round [34] log likelihood: -490492.528191
EM: Round [35] log likelihood: -490492.499557
EM: Round [36] log likelihood: -490492.472436
EM: Round [37] log likelihood: -490492.446703
EM: Round [38] log likelihood: -490492.422245
EM: Round [39] log likelihood: -490492.398965
EM: Round [40] log likelihood: -490492.376776
EM: Round [41] log likelihood: -490492.355598
EM: Round [42] log likelihood: -490492.335363
EM: Round [43] log likelihood: -490492.316006
EM: Round [44] log likelihood: -490492.297470
EM: Round [45] log likelihood: -490492.279704
EM: Round [46] log likelihood: -490492.262658
EM: Round [47] log likelihood: -490492.246291
EM: Round [48] log likelihood: -490492.230562
EM: Round [49] log likelihood: -490492.215435
EM: Round [50] log likelihood: -490492.200876
EM: Round [51] log likelihood: -490492.186853
EM: Round [52] log likelihood: -490492.173337
EM: Round [53] log likelihood: -490492.160303
EM: Round [54] log likelihood: -490492.147724
EM: Round [55] log likelihood: -490492.135579
EM: Round [56] log likelihood: -490492.123844
EM: Round [57] log likelihood: -490492.112500
EM: Round [58] log likelihood: -490492.101528
EM: Round [59] log likelihood: -490492.090910
EM: Round [60] log likelihood: -490492.080631
EM: Round [61] log likelihood: -490492.070673
EM: Round [62] log likelihood: -490492.061023
EM: Round [63] log likelihood: -490492.051667
EM: Round [64] log likelihood: -490492.042592
EM: Round [65] log likelihood: -490492.033785
EM: Round [66] log likelihood: -490492.025236
EM: Round [67] log likelihood: -490492.016934
EM: Round [68] log likelihood: -490492.008868
EM: Round [69] log likelihood: -490492.001028
EM: Round [70] log likelihood: -490491.993406
EM: Round [71] log likelihood: -490491.985992
EM: Round [72] log likelihood: -490491.978780
EM: Round [73] log likelihood: -490491.971760
EM: Round [74] log likelihood: -490491.964925
EM: Round [75] log likelihood: -490491.958269
EM: Round [76] log likelihood: -490491.951785
EM: Round [77] log likelihood: -490491.945467
EM: Round [78] log likelihood: -490491.939308
EM: Round [79] log likelihood: -490491.933303
EM: Round [80] log likelihood: -490491.927446
EM: Round [81] log likelihood: -490491.921733
EM: Round [82] log likelihood: -490491.916158
EM: Round [83] log likelihood: -490491.910716
EM: Round [84] log likelihood: -490491.905404
EM: Round [85] log likelihood: -490491.900216
EM: Round [86] log likelihood: -490491.895150
EM: Round [87] log likelihood: -490491.890200
EM: Round [88] log likelihood: -490491.885363
EM: Round [89] log likelihood: -490491.880636
EM: Round [90] log likelihood: -490491.876015
EM: Round [91] log likelihood: -490491.871497
EM: Round [92] log likelihood: -490491.867078
EM: Round [93] log likelihood: -490491.862756
EM: Round [94] log likelihood: -490491.858528
EM: Round [95] log likelihood: -490491.854391
EM: Round [96] log likelihood: -490491.850343
EM: Round [97] log likelihood: -490491.846380
EM: Round [98] log likelihood: -490491.842501
EM: Round [99] log likelihood: -490491.838703
EM: Round [100] log likelihood: -490491.834984
EM: Round [101] log likelihood: -490491.831341
EM: Round [102] log likelihood: -490491.827773
EM: Round [103] log likelihood: -490491.824277
EM: Round [104] log likelihood: -490491.820852
EM: Round [105] log likelihood: -490491.817496
EM: Round [106] log likelihood: -490491.814206
EM: Round [107] log likelihood: -490491.810982
EM: Round [108] log likelihood: -490491.807821
EM: Round [109] log likelihood: -490491.804722
EM: Round [110] log likelihood: -490491.801683
EM: Round [111] log likelihood: -490491.798703
EM: Round [112] log likelihood: -490491.795780
EM: Round [113] log likelihood: -490491.792913
EM: Round [114] log likelihood: -490491.790101
EM: Round [115] log likelihood: -490491.787342
EM: Round [116] log likelihood: -490491.784635
EM: Round [117] log likelihood: -490491.781979
EM: Round [118] log likelihood: -490491.779372
EM: Round [119] log likelihood: -490491.776813
EM: Round [120] log likelihood: -490491.774302
EM: Round [121] log likelihood: -490491.771837
EM: Round [122] log likelihood: -490491.769417
EM: Round [123] log likelihood: -490491.767041
EM: Round [124] log likelihood: -490491.764708
EM: Round [125] log likelihood: -490491.762417
EM: Round [126] log likelihood: -490491.760167
EM: Round [127] log likelihood: -490491.757958
EM: Round [128] log likelihood: -490491.755788
EM: Round [129] log likelihood: -490491.753656
EM: Round [130] log likelihood: -490491.751562
EM: Round [131] log likelihood: -490491.749505
EM: Round [132] log likelihood: -490491.747485
EM: Round [133] log likelihood: -490491.745499
EM: Round [134] log likelihood: -490491.743548
EM: Round [135] log likelihood: -490491.741631
EM: Round [136] log likelihood: -490491.739747
EM: Round [137] log likelihood: -490491.737896
EM: Round [138] log likelihood: -490491.736076
EM: Round [139] log likelihood: -490491.734287
EM: Round [140] log likelihood: -490491.732529
EM: Round [141] log likelihood: -490491.730801
EM: Round [142] log likelihood: -490491.729102
EM: Round [143] log likelihood: -490491.727432
EM: Round [144] log likelihood: -490491.725791
EM: Round [145] log likelihood: -490491.724176
EM: Round [146] log likelihood: -490491.722589
EM: Round [147] log likelihood: -490491.721028
EM: Round [148] log likelihood: -490491.719493
EM: Round [149] log likelihood: -490491.717984
EM: Round [150] log likelihood: -490491.716500
EM: Round [151] log likelihood: -490491.715040
EM: Round [152] log likelihood: -490491.713604
EM: Round [153] log likelihood: -490491.712192
EM: Round [154] log likelihood: -490491.710803
EM: Round [155] log likelihood: -490491.709437
EM: Round [156] log likelihood: -490491.708093
EM: Round [157] log likelihood: -490491.706771
EM: Round [158] log likelihood: -490491.705471
EM: Round [159] log likelihood: -490491.704191
EM: Round [160] log likelihood: -490491.702932
EM: Round [161] log likelihood: -490491.701694
EM: Round [162] log likelihood: -490491.700475
EM: Round [163] log likelihood: -490491.699276
EM: Round [164] log likelihood: -490491.698096
EM: Round [165] log likelihood: -490491.696935
EM: Round [166] log likelihood: -490491.695793
EM: Round [167] log likelihood: -490491.694669
EM: Round [168] log likelihood: -490491.693562
EM: Round [169] log likelihood: -490491.692473
EM: Round [170] log likelihood: -490491.691402
EM: Round [171] log likelihood: -490491.690347
EM: Round [172] log likelihood: -490491.689309
EM: Round [173] log likelihood: -490491.688287
EM: Round [174] log likelihood: -490491.687281
EM: Round [175] log likelihood: -490491.686291
EM: Round [176] log likelihood: -490491.685317
EM: Round [177] log likelihood: -490491.684358
EM: Round [178] log likelihood: -490491.683413
EM: Round [179] log likelihood: -490491.682484
EM: Round [180] log likelihood: -490491.681569
EM: Round [181] log likelihood: -490491.680668
EM: Round [182] log likelihood: -490491.679781
EM: Round [183] log likelihood: -490491.678907
EM: Round [184] log likelihood: -490491.678048
EM: Round [185] log likelihood: -490491.677201
EM: Round [186] log likelihood: -490491.676367
EM: Round [187] log likelihood: -490491.675547
EM: Round [188] log likelihood: -490491.674739
EM: Round [189] log likelihood: -490491.673943
EM: Round [190] log likelihood: -490491.673159
EM: Round [191] log likelihood: -490491.672388
EM: Round [192] log likelihood: -490491.671628
EM: Round [193] log likelihood: -490491.670880
EM: Round [194] log likelihood: -490491.670143
EM: Round [195] log likelihood: -490491.669417
EM: Round [196] log likelihood: -490491.668702
EM: Round [197] log likelihood: -490491.667998
EM: Round [198] log likelihood: -490491.667305
EM: Round [199] log likelihood: -490491.666623
EM: Round [200] log likelihood: -490491.665950
EM: Round [201] log likelihood: -490491.665288
EM: Round [202] log likelihood: -490491.664635
EM: Round [203] log likelihood: -490491.663993
EM: Round [204] log likelihood: -490491.663360
EM: Round [205] log likelihood: -490491.662737
EM: Round [206] log likelihood: -490491.662123
EM: Round [207] log likelihood: -490491.661518
EM: Round [208] log likelihood: -490491.660922
EM: Round [209] log likelihood: -490491.660335
EM: Round [210] log likelihood: -490491.659757
EM: Round [211] log likelihood: -490491.659187
EM: Round [212] log likelihood: -490491.658626
EM: Round [213] log likelihood: -490491.658074
EM: Round [214] log likelihood: -490491.657529
EM: Round [215] log likelihood: -490491.656993
EM: Round [216] log likelihood: -490491.656464
EM: Round [217] log likelihood: -490491.655943
EM: Round [218] log likelihood: -490491.655430
EM: Round [219] log likelihood: -490491.654925
EM: Round [220] log likelihood: -490491.654427
EM: Round [221] log likelihood: -490491.653936
EM: Round [222] log likelihood: -490491.653453
EM: Round [223] log likelihood: -490491.652977
EM: Round [224] log likelihood: -490491.652507
EM: Round [225] log likelihood: -490491.652045
EM: Round [226] log likelihood: -490491.651589
EM: Round [227] log likelihood: -490491.651140
EM: Round [228] log likelihood: -490491.650698
EM: Round [229] log likelihood: -490491.650262
EM: Round [230] log likelihood: -490491.649833
EM: Round [231] log likelihood: -490491.649409
EM: Round [232] log likelihood: -490491.648992
EM: Round [233] log likelihood: -490491.648581
EM: Round [234] log likelihood: -490491.648176
EM: Round [235] log likelihood: -490491.647777
EM: Round [236] log likelihood: -490491.647384
EM: Round [237] log likelihood: -490491.646996
EM: Round [238] log likelihood: -490491.646614
EM: Round [239] log likelihood: -490491.646238
EM: Round [240] log likelihood: -490491.645867
EM: Round [241] log likelihood: -490491.645501
EM: Round [242] log likelihood: -490491.645141
EM: Round [243] log likelihood: -490491.644786
EM: Round [244] log likelihood: -490491.644436
EM: Round [245] log likelihood: -490491.644091
EM: Round [246] log likelihood: -490491.643751
EM: Round [247] log likelihood: -490491.643416
EM: Round [248] log likelihood: -490491.643086
EM: Round [249] log likelihood: -490491.642760
EM: Round [250] log likelihood: -490491.642439
EM: Round [251] log likelihood: -490491.642123
EM: Round [252] log likelihood: -490491.641812
EM: Round [253] log likelihood: -490491.641504
EM: Round [254] log likelihood: -490491.641202
EM: Round [255] log likelihood: -490491.640903
EM: Round [256] log likelihood: -490491.640609
EM: Round [257] log likelihood: -490491.640319
EM: Round [258] log likelihood: -490491.640033
EM: Round [259] log likelihood: -490491.639752
EM: Round [260] log likelihood: -490491.639474
EM: Round [261] log likelihood: -490491.639200
EM: Round [262] log likelihood: -490491.638930
EM: Round [263] log likelihood: -490491.638664
EM: Round [264] log likelihood: -490491.638402
EM: Round [265] log likelihood: -490491.638144
EM: Round [266] log likelihood: -490491.637889
EM: Round [267] log likelihood: -490491.637638
EM: Round [268] log likelihood: -490491.637390
EM: Round [269] log likelihood: -490491.637146
EM: Round [270] log likelihood: -490491.636906
EM: Round [271] log likelihood: -490491.636668
EM: Round [272] log likelihood: -490491.636435
EM: Round [273] log likelihood: -490491.636204
EM: Round [274] log likelihood: -490491.635977
EM: Round [275] log likelihood: -490491.635753
EM: Round [276] log likelihood: -490491.635532
EM: Round [277] log likelihood: -490491.635314
EM: Round [278] log likelihood: -490491.635100
EM: Round [279] log likelihood: -490491.634888
EM: Round [280] log likelihood: -490491.634679
EM: Round [281] log likelihood: -490491.634473
EM: Round [282] log likelihood: -490491.634271
EM: Round [283] log likelihood: -490491.634071
EM: Round [284] log likelihood: -490491.633874
EM: Round [285] log likelihood: -490491.633679
EM: Round [286] log likelihood: -490491.633488
EM: Round [287] log likelihood: -490491.633299
EM: Round [288] log likelihood: -490491.633112
EM: Round [289] log likelihood: -490491.632929
EM: Round [290] log likelihood: -490491.632747
EM: Round [291] log likelihood: -490491.632569
EM: Round [292] log likelihood: -490491.632393
EM: Round [293] log likelihood: -490491.632219
EM: Round [294] log likelihood: -490491.632048
EM: Round [295] log likelihood: -490491.631879
EM: Round [296] log likelihood: -490491.631713
EM: Round [297] log likelihood: -490491.631549
EM: Round [298] log likelihood: -490491.631387
EM: Round [299] log likelihood: -490491.631227
EM: Round [300] log likelihood: -490491.631070
EM: Round [301] log likelihood: -490491.630915
EM: Round [302] log likelihood: -490491.630762
EM: Round [303] log likelihood: -490491.630611
EM: Round [304] log likelihood: -490491.630462
EM: Round [305] log likelihood: -490491.630316
EM: Round [306] log likelihood: -490491.630171
EM: Round [307] log likelihood: -490491.630028
EM: Round [308] log likelihood: -490491.629888
EM: Round [309] log likelihood: -490491.629749
EM: Round [310] log likelihood: -490491.629612
EM: Round [311] log likelihood: -490491.629478
EM: Round [312] log likelihood: -490491.629345
EM: Round [313] log likelihood: -490491.629213
EM: Round [314] log likelihood: -490491.629084
EM: Round [315] log likelihood: -490491.628957
EM: Round [316] log likelihood: -490491.628831
EM: Round [317] log likelihood: -490491.628707
EM: Round [318] log likelihood: -490491.628584
EM: Round [319] log likelihood: -490491.628464
EM: Round [320] log likelihood: -490491.628345
EM: Round [321] log likelihood: -490491.628228
EM: Round [322] log likelihood: -490491.628112
EM: Round [323] log likelihood: -490491.627998
EM: Round [324] log likelihood: -490491.627885
EM: Round [325] log likelihood: -490491.627774
EM: Round [326] log likelihood: -490491.627665
EM: Round [327] log likelihood: -490491.627557
EM: Round [328] log likelihood: -490491.627450
EM: Round [329] log likelihood: -490491.627345
EM: Round [330] log likelihood: -490491.627242
EM: Round [331] log likelihood: -490491.627140
EM: Round [332] log likelihood: -490491.627039
EM: Round [333] log likelihood: -490491.626940
EM: Stopping iterations at round 333 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.XgHQzd6GtV/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.XgHQzd6GtV/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.XgHQzd6GtV/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.XgHQzd6GtV/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.XgHQzd6GtV/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.XgHQzd6GtV/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.XgHQzd6GtV/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.XgHQzd6GtV/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.XgHQzd6GtV/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.XgHQzd6GtV/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.XgHQzd6GtV/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.XgHQzd6GtV/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.XgHQzd6GtV/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.XgHQzd6GtV/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 295059015 > /tmp/nxf.XgHQzd6GtV/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.XgHQzd6GtV/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.XgHQzd6GtV/ctat_genome_lib_build_dir > /tmp/nxf.XgHQzd6GtV/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.XgHQzd6GtV/ctat_genome_lib_build_dir --annotate /tmp/nxf.XgHQzd6GtV/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.XgHQzd6GtV/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.XgHQzd6GtV/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.XgHQzd6GtV/ctat_genome_lib_build_dir
-done, see /tmp/nxf.XgHQzd6GtV/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.XgHQzd6GtV/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.XgHQzd6GtV/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 2447, filtered: 13651)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.XgHQzd6GtV/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.XgHQzd6GtV/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.XgHQzd6GtV/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [ENSG00000257403.2]
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WARNING, no entry stored in dbm for [ENSG00000275307.1]
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WARNING, no entry stored in dbm for [ENSG00000213904.9]
WARNING, no entry stored in dbm for [ENSG00000224122.2]
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WARNING, no entry stored in dbm for [ENSG00000245694.10]
WARNING, no entry stored in dbm for [ENSG00000234805.1]
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WARNING, no entry stored in dbm for [ENSG00000187953.10]
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WARNING, no entry stored in dbm for [ENSG00000258699.1]
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WARNING, no entry stored in dbm for [ENSG00000234771.3]
WARNING, no entry stored in dbm for [ENSG00000258501.1]
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WARNING, no entry stored in dbm for [ENSG00000287643.1]
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WARNING, no entry stored in dbm for [ENSG00000229739.4]
WARNING, no entry stored in dbm for [ENSG00000288538.1]
WARNING, no entry stored in dbm for [ENSG00000265018.6]
WARNING, no entry stored in dbm for [ENSG00000245526.11]
WARNING, no entry stored in dbm for [ENSG00000267107.8]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000282458.1]
WARNING, no entry stored in dbm for [ENSG00000279175.1]
WARNING, no entry stored in dbm for [ENSG00000279175.1]
WARNING, no entry stored in dbm for [ENSG00000279175.1]
WARNING, no entry stored in dbm for [ENSG00000279175.1]
WARNING, no entry stored in dbm for [ENSG00000229852.4]
WARNING, no entry stored in dbm for [ENSG00000254770.1]
WARNING, no entry stored in dbm for [ENSG00000254940.1]
WARNING, no entry stored in dbm for [ENSG00000230411.1]
WARNING, no entry stored in dbm for [ENSG00000258853.1]
WARNING, no entry stored in dbm for [ENSG00000247556.6]
WARNING, no entry stored in dbm for [ENSG00000226328.7]
WARNING, no entry stored in dbm for [ENSG00000180015.12]
WARNING, no entry stored in dbm for [ENSG00000106133.18]
WARNING, no entry stored in dbm for [ENSG00000188599.17]
WARNING, no entry stored in dbm for [ENSG00000263142.5]
WARNING, no entry stored in dbm for [ENSG00000260032.2]
WARNING, no entry stored in dbm for [ENSG00000236497.2]
WARNING, no entry stored in dbm for [ENSG00000272335.1]
WARNING, no entry stored in dbm for [ENSG00000253604.1]
WARNING, no entry stored in dbm for [ENSG00000258867.6]
WARNING, no entry stored in dbm for [ENSG00000230937.12]
WARNING, no entry stored in dbm for [ENSG00000239213.6]
WARNING, no entry stored in dbm for [ENSG00000231382.1]
WARNING, no entry stored in dbm for [ENSG00000227392.2]
WARNING, no entry stored in dbm for [ENSG00000176183.8]
WARNING, no entry stored in dbm for [ENSG00000260112.1]
WARNING, no entry stored in dbm for [ENSG00000236051.7]
WARNING, no entry stored in dbm for [ENSG00000228323.2]
WARNING, no entry stored in dbm for [ENSG00000226519.2]
WARNING, no entry stored in dbm for [ENSG00000283426.1]
WARNING, no entry stored in dbm for [ENSG00000214955.5]
WARNING, no entry stored in dbm for [ENSG00000267040.6]
WARNING, no entry stored in dbm for [ENSG00000278390.5]
WARNING, no entry stored in dbm for [ENSG00000248979.2]
WARNING, no entry stored in dbm for [ENSG00000264099.1]
WARNING, no entry stored in dbm for [ENSG00000262454.4]
WARNING, no entry stored in dbm for [ENSG00000174407.13]
WARNING, no entry stored in dbm for [ENSG00000233325.3]
WARNING, no entry stored in dbm for [ENSG00000286971.1]
WARNING, no entry stored in dbm for [ENSG00000235143.1]
WARNING, no entry stored in dbm for [ENSG00000229770.2]
WARNING, no entry stored in dbm for [ENSG00000284986.1]
WARNING, no entry stored in dbm for [ENSG00000278217.1]
WARNING, no entry stored in dbm for [ENSG00000273356.1]
WARNING, no entry stored in dbm for [ENSG00000231312.7]
WARNING, no entry stored in dbm for [ENSG00000285257.1]
WARNING, no entry stored in dbm for [ENSG00000251501.1]
WARNING, no entry stored in dbm for [ENSG00000234961.1]
WARNING, no entry stored in dbm for [ENSG00000227195.11]
WARNING, no entry stored in dbm for [ENSG00000248323.7]
WARNING, no entry stored in dbm for [ENSG00000270499.1]
WARNING, no entry stored in dbm for [ENSG00000273658.1]
WARNING, no entry stored in dbm for [ENSG00000284428.1]
WARNING, no entry stored in dbm for [ENSG00000275374.1]
WARNING, no entry stored in dbm for [ENSG00000240032.1]
WARNING, no entry stored in dbm for [ENSG00000251513.2]
WARNING, no entry stored in dbm for [ENSG00000236039.3]
WARNING, no entry stored in dbm for [ENSG00000259416.2]
WARNING, no entry stored in dbm for [ENSG00000204241.8]
WARNING, no entry stored in dbm for [ENSG00000204241.8]
WARNING, no entry stored in dbm for [ENSG00000251323.3]
WARNING, no entry stored in dbm for [ENSG00000273409.3]
WARNING, no entry stored in dbm for [ENSG00000241288.8]
WARNING, no entry stored in dbm for [ENSG00000228709.1]
WARNING, no entry stored in dbm for [ENSG00000260239.2]
WARNING, no entry stored in dbm for [ENSG00000225546.6]
WARNING, no entry stored in dbm for [ENSG00000254701.3]
WARNING, no entry stored in dbm for [ENSG00000267719.1]
WARNING, no entry stored in dbm for [ENSG00000249383.2]
WARNING, no entry stored in dbm for [ENSG00000254101.7]
WARNING, no entry stored in dbm for [ENSG00000224655.7]
WARNING, no entry stored in dbm for [ENSG00000223382.5]
WARNING, no entry stored in dbm for [ENSG00000224910.2]
WARNING, no entry stored in dbm for [ENSG00000236532.6]
WARNING, no entry stored in dbm for [ENSG00000231236.2]
WARNING, no entry stored in dbm for [ENSG00000082929.8]
WARNING, no entry stored in dbm for [ENSG00000215866.8]
WARNING, no entry stored in dbm for [ENSG00000223823.1]
WARNING, no entry stored in dbm for [ENSG00000247157.7]
WARNING, no entry stored in dbm for [ENSG00000281404.2]
WARNING, no entry stored in dbm for [ENSG00000228794.10]
WARNING, no entry stored in dbm for [ENSG00000228794.10]
WARNING, no entry stored in dbm for [ENSG00000230426.4]
WARNING, no entry stored in dbm for [ENSG00000232715.1]
WARNING, no entry stored in dbm for [ENSG00000282508.2]
WARNING, no entry stored in dbm for [ENSG00000277147.6]
WARNING, no entry stored in dbm for [ENSG00000225269.3]
WARNING, no entry stored in dbm for [ENSG00000225269.3]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000260738.1]
WARNING, no entry stored in dbm for [ENSG00000235621.9]
WARNING, no entry stored in dbm for [ENSG00000226240.2]
WARNING, no entry stored in dbm for [ENSG00000149656.8]
WARNING, no entry stored in dbm for [ENSG00000188185.13]
WARNING, no entry stored in dbm for [ENSG00000276758.1]
WARNING, no entry stored in dbm for [ENSG00000218175.2]
WARNING, no entry stored in dbm for [ENSG00000271602.1]
WARNING, no entry stored in dbm for [ENSG00000248568.1]
WARNING, no entry stored in dbm for [ENSG00000231203.1]
WARNING, no entry stored in dbm for [ENSG00000214514.8]
WARNING, no entry stored in dbm for [ENSG00000261764.1]
WARNING, no entry stored in dbm for [ENSG00000266820.1]
WARNING, no entry stored in dbm for [ENSG00000263647.1]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000267325.2]
WARNING, no entry stored in dbm for [ENSG00000219222.1]
WARNING, no entry stored in dbm for [ENSG00000250686.2]
WARNING, no entry stored in dbm for [ENSG00000261058.1]
WARNING, no entry stored in dbm for [ENSG00000229981.8]
WARNING, no entry stored in dbm for [ENSG00000223509.8]
WARNING, no entry stored in dbm for [ENSG00000260776.6]
WARNING, no entry stored in dbm for [ENSG00000238217.6]
WARNING, no entry stored in dbm for [ENSG00000260265.1]
WARNING, no entry stored in dbm for [ENSG00000254034.2]
WARNING, no entry stored in dbm for [ENSG00000200156.1]
WARNING, no entry stored in dbm for [ENSG00000199568.1]
WARNING, no entry stored in dbm for [ENSG00000202538.1]
WARNING, no entry stored in dbm for [ENSG00000234769.7]
WARNING, no entry stored in dbm for [ENSG00000236679.2]
WARNING, no entry stored in dbm for [ENSG00000274461.2]
WARNING, no entry stored in dbm for [ENSG00000218175.2]
WARNING, no entry stored in dbm for [ENSG00000235821.1]
WARNING, no entry stored in dbm for [ENSG00000258676.5]
WARNING, no entry stored in dbm for [ENSG00000227038.3]
WARNING, no entry stored in dbm for [ENSG00000276975.3]
WARNING, no entry stored in dbm for [ENSG00000227733.10]
WARNING, no entry stored in dbm for [ENSG00000227733.10]
WARNING, no entry stored in dbm for [ENSG00000227733.10]
WARNING, no entry stored in dbm for [ENSG00000223756.7]
WARNING, no entry stored in dbm for [ENSG00000235864.1]
WARNING, no entry stored in dbm for [ENSG00000243766.8]
WARNING, no entry stored in dbm for [ENSG00000239419.3]
WARNING, no entry stored in dbm for [ENSG00000233429.9]
WARNING, no entry stored in dbm for [ENSG00000255141.1]
WARNING, no entry stored in dbm for [ENSG00000227638.2]
WARNING, no entry stored in dbm for [ENSG00000236539.3]
WARNING, no entry stored in dbm for [ENSG00000197301.7]
WARNING, no entry stored in dbm for [ENSG00000250966.2]
WARNING, no entry stored in dbm for [ENSG00000248785.1]
WARNING, no entry stored in dbm for [ENSG00000233985.2]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000235464.1]
WARNING, no entry stored in dbm for [ENSG00000273295.1]
WARNING, no entry stored in dbm for [ENSG00000229180.7]
WARNING, no entry stored in dbm for [ENSG00000237125.11]
WARNING, no entry stored in dbm for [ENSG00000232721.2]
WARNING, no entry stored in dbm for [ENSG00000224074.3]
WARNING, no entry stored in dbm for [ENSG00000198237.8]
WARNING, no entry stored in dbm for [ENSG00000224699.9]
WARNING, no entry stored in dbm for [ENSG00000234945.8]
WARNING, no entry stored in dbm for [ENSG00000227038.3]
WARNING, no entry stored in dbm for [ENSG00000230189.7]
WARNING, no entry stored in dbm for [ENSG00000261168.1]
WARNING, no entry stored in dbm for [ENSG00000250546.6]
WARNING, no entry stored in dbm for [ENSG00000182841.12]
WARNING, no entry stored in dbm for [ENSG00000253190.4]
WARNING, no entry stored in dbm for [ENSG00000261453.2]
WARNING, no entry stored in dbm for [ENSG00000214331.8]
WARNING, no entry stored in dbm for [ENSG00000266904.6]
WARNING, no entry stored in dbm for [ENSG00000215866.8]
WARNING, no entry stored in dbm for [ENSG00000259570.1]
WARNING, no entry stored in dbm for [ENSG00000189136.9]
WARNING, no entry stored in dbm for [ENSG00000214433.4]
WARNING, no entry stored in dbm for [ENSG00000250903.9]
WARNING, no entry stored in dbm for [ENSG00000262248.1]
WARNING, no entry stored in dbm for [ENSG00000287690.1]
WARNING, no entry stored in dbm for [ENSG00000255474.1]
WARNING, no entry stored in dbm for [ENSG00000196295.12]
WARNING, no entry stored in dbm for [ENSG00000196295.12]
WARNING, no entry stored in dbm for [ENSG00000255471.1]
WARNING, no entry stored in dbm for [ENSG00000230590.11]
WARNING, no entry stored in dbm for [ENSG00000279712.1]
WARNING, no entry stored in dbm for [ENSG00000257126.6]
WARNING, no entry stored in dbm for [ENSG00000204832.10]
WARNING, no entry stored in dbm for [ENSG00000228340.6]
WARNING, no entry stored in dbm for [ENSG00000230231.1]
WARNING, no entry stored in dbm for [ENSG00000230231.1]
WARNING, no entry stored in dbm for [ENSG00000235590.7]
WARNING, no entry stored in dbm for [ENSG00000230131.6]
WARNING, no entry stored in dbm for [ENSG00000256075.1]
WARNING, no entry stored in dbm for [ENSG00000254793.1]
WARNING, no entry stored in dbm for [ENSG00000280195.1]
WARNING, no entry stored in dbm for [ENSG00000276805.2]
WARNING, no entry stored in dbm for [ENSG00000225670.4]
WARNING, no entry stored in dbm for [ENSG00000251379.1]
WARNING, no entry stored in dbm for [ENSG00000233064.2]
WARNING, no entry stored in dbm for [ENSG00000237298.10]
WARNING, no entry stored in dbm for [ENSG00000228399.1]
WARNING, no entry stored in dbm for [ENSG00000287356.1]
WARNING, no entry stored in dbm for [ENSG00000255052.5]
WARNING, no entry stored in dbm for [ENSG00000244383.2]
WARNING, no entry stored in dbm for [ENSG00000232300.1]
WARNING, no entry stored in dbm for [ENSG00000236438.7]
WARNING, no entry stored in dbm for [ENSG00000258454.1]
WARNING, no entry stored in dbm for [ENSG00000268869.6]
WARNING, no entry stored in dbm for [ENSG00000260565.7]
WARNING, no entry stored in dbm for [ENSG00000267259.1]
WARNING, no entry stored in dbm for [ENSG00000235623.2]
WARNING, no entry stored in dbm for [ENSG00000286965.1]
WARNING, no entry stored in dbm for [ENSG00000231482.3]
WARNING, no entry stored in dbm for [ENSG00000229167.2]
WARNING, no entry stored in dbm for [ENSG00000234152.1]
WARNING, no entry stored in dbm for [ENSG00000234678.2]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000267422.1]
WARNING, no entry stored in dbm for [ENSG00000228824.7]
WARNING, no entry stored in dbm for [ENSG00000215093.3]
WARNING, no entry stored in dbm for [ENSG00000259612.1]
WARNING, no entry stored in dbm for [ENSG00000224430.2]
WARNING, no entry stored in dbm for [ENSG00000231793.5]
WARNING, no entry stored in dbm for [ENSG00000215105.4]
WARNING, no entry stored in dbm for [ENSG00000250091.3]
WARNING, no entry stored in dbm for [ENSG00000204790.9]
WARNING, no entry stored in dbm for [ENSG00000258498.8]
WARNING, no entry stored in dbm for [ENSG00000259583.3]
WARNING, no entry stored in dbm for [ENSG00000235244.4]
WARNING, no entry stored in dbm for [ENSG00000226950.8]
WARNING, no entry stored in dbm for [ENSG00000281392.2]
WARNING, no entry stored in dbm for [ENSG00000286458.1]
WARNING, no entry stored in dbm for [ENSG00000228314.1]
WARNING, no entry stored in dbm for [ENSG00000258595.2]
WARNING, no entry stored in dbm for [ENSG00000245384.2]
WARNING, no entry stored in dbm for [ENSG00000258502.6]
WARNING, no entry stored in dbm for [ENSG00000256948.1]
WARNING, no entry stored in dbm for [ENSG00000236948.2]
WARNING, no entry stored in dbm for [ENSG00000288262.1]
WARNING, no entry stored in dbm for [ENSG00000215812.5]
WARNING, no entry stored in dbm for [ENSG00000269001.2]
WARNING, no entry stored in dbm for [ENSG00000250241.6]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000233871.2]
WARNING, no entry stored in dbm for [ENSG00000278932.4]
WARNING, no entry stored in dbm for [ENSG00000278932.4]
WARNING, no entry stored in dbm for [ENSG00000229321.2]
WARNING, no entry stored in dbm for [ENSG00000283405.2]
WARNING, no entry stored in dbm for [ENSG00000254109.6]
WARNING, no entry stored in dbm for [ENSG00000278969.1]
WARNING, no entry stored in dbm for [ENSG00000168405.17]
WARNING, no entry stored in dbm for [ENSG00000224216.1]
WARNING, no entry stored in dbm for [ENSG00000285051.2]
WARNING, no entry stored in dbm for [ENSG00000196295.12]
WARNING, no entry stored in dbm for [ENSG00000179523.5]
WARNING, no entry stored in dbm for [ENSG00000253877.6]
WARNING, no entry stored in dbm for [ENSG00000253807.6]
WARNING, no entry stored in dbm for [ENSG00000226978.1]
WARNING, no entry stored in dbm for [ENSG00000247228.3]
WARNING, no entry stored in dbm for [ENSG00000154608.14]
WARNING, no entry stored in dbm for [ENSG00000234961.1]
WARNING, no entry stored in dbm for [ENSG00000261189.1]
WARNING, no entry stored in dbm for [ENSG00000235501.6]
WARNING, no entry stored in dbm for [ENSG00000197214.5]
WARNING, no entry stored in dbm for [ENSG00000286391.1]
WARNING, no entry stored in dbm for [ENSG00000287452.2]
WARNING, no entry stored in dbm for [ENSG00000233766.7]
WARNING, no entry stored in dbm for [ENSG00000233766.7]
WARNING, no entry stored in dbm for [ENSG00000254166.3]
WARNING, no entry stored in dbm for [ENSG00000272168.8]
WARNING, no entry stored in dbm for [ENSG00000272168.8]
WARNING, no entry stored in dbm for [ENSG00000215874.3]
WARNING, no entry stored in dbm for [ENSG00000277112.3]
WARNING, no entry stored in dbm for [ENSG00000255394.4]
WARNING, no entry stored in dbm for [ENSG00000231933.7]
WARNING, no entry stored in dbm for [ENSG00000230202.1]
WARNING, no entry stored in dbm for [ENSG00000226445.2]
WARNING, no entry stored in dbm for [ENSG00000259728.5]
WARNING, no entry stored in dbm for [ENSG00000146556.14]
WARNING, no entry stored in dbm for [ENSG00000251079.6]
WARNING, no entry stored in dbm for [ENSG00000237238.3]
WARNING, no entry stored in dbm for [ENSG00000237238.3]
WARNING, no entry stored in dbm for [ENSG00000237238.3]
WARNING, no entry stored in dbm for [ENSG00000278616.1]
WARNING, no entry stored in dbm for [ENSG00000224093.5]
WARNING, no entry stored in dbm for [ENSG00000243554.1]
WARNING, no entry stored in dbm for [ENSG00000205534.6]
WARNING, no entry stored in dbm for [ENSG00000240707.3]
WARNING, no entry stored in dbm for [ENSG00000233901.6]
WARNING, no entry stored in dbm for [ENSG00000287315.1]
WARNING, no entry stored in dbm for [ENSG00000228341.1]
WARNING, no entry stored in dbm for [ENSG00000264313.2]
WARNING, no entry stored in dbm for [ENSG00000230092.7]
WARNING, no entry stored in dbm for [ENSG00000268388.6]
WARNING, no entry stored in dbm for [ENSG00000256591.5]
WARNING, no entry stored in dbm for [ENSG00000234034.1]
WARNING, no entry stored in dbm for [ENSG00000283633.1]
WARNING, no entry stored in dbm for [ENSG00000263551.6]
WARNING, no entry stored in dbm for [ENSG00000213529.3]
WARNING, no entry stored in dbm for [ENSG00000201704.1]
WARNING, no entry stored in dbm for [ENSG00000285961.1]
WARNING, no entry stored in dbm for [ENSG00000230937.12]
WARNING, no entry stored in dbm for [ENSG00000275011.1]
WARNING, no entry stored in dbm for [ENSG00000259984.1]
WARNING, no entry stored in dbm for [ENSG00000288107.1]
WARNING, no entry stored in dbm for [ENSG00000231964.1]
WARNING, no entry stored in dbm for [ENSG00000249007.1]
WARNING, no entry stored in dbm for [ENSG00000272501.1]
WARNING, no entry stored in dbm for [ENSG00000271806.1]
WARNING, no entry stored in dbm for [ENSG00000286863.1]
WARNING, no entry stored in dbm for [ENSG00000286863.1]
WARNING, no entry stored in dbm for [ENSG00000229672.3]
WARNING, no entry stored in dbm for [ENSG00000203565.3]
WARNING, no entry stored in dbm for [ENSG00000225096.3]
WARNING, no entry stored in dbm for [ENSG00000225096.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000287811.1]
WARNING, no entry stored in dbm for [ENSG00000287811.1]
WARNING, no entry stored in dbm for [ENSG00000238005.4]
WARNING, no entry stored in dbm for [ENSG00000227619.3]
WARNING, no entry stored in dbm for [ENSG00000232347.1]
WARNING, no entry stored in dbm for [ENSG00000235582.2]
WARNING, no entry stored in dbm for [ENSG00000215016.2]
WARNING, no entry stored in dbm for [ENSG00000287903.1]
WARNING, no entry stored in dbm for [ENSG00000237445.2]
WARNING, no entry stored in dbm for [ENSG00000236523.2]
WARNING, no entry stored in dbm for [ENSG00000234156.3]
WARNING, no entry stored in dbm for [ENSG00000286109.1]
WARNING, no entry stored in dbm for [ENSG00000230533.4]
WARNING, no entry stored in dbm for [ENSG00000288598.2]
WARNING, no entry stored in dbm for [ENSG00000246203.2]
WARNING, no entry stored in dbm for [ENSG00000287278.1]
WARNING, no entry stored in dbm for [ENSG00000228430.9]
WARNING, no entry stored in dbm for [ENSG00000230779.1]
WARNING, no entry stored in dbm for [ENSG00000236495.2]
WARNING, no entry stored in dbm for [ENSG00000226987.1]
WARNING, no entry stored in dbm for [ENSG00000243517.1]
WARNING, no entry stored in dbm for [ENSG00000285664.2]
WARNING, no entry stored in dbm for [ENSG00000219784.2]
WARNING, no entry stored in dbm for [ENSG00000272084.1]
WARNING, no entry stored in dbm for [ENSG00000227220.1]
WARNING, no entry stored in dbm for [ENSG00000227220.1]
WARNING, no entry stored in dbm for [ENSG00000236166.1]
WARNING, no entry stored in dbm for [ENSG00000287562.1]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000285407.1]
WARNING, no entry stored in dbm for [ENSG00000231329.8]
WARNING, no entry stored in dbm for [ENSG00000287593.1]
WARNING, no entry stored in dbm for [ENSG00000280356.1]
WARNING, no entry stored in dbm for [ENSG00000229766.7]
WARNING, no entry stored in dbm for [ENSG00000287619.1]
WARNING, no entry stored in dbm for [ENSG00000215022.7]
WARNING, no entry stored in dbm for [ENSG00000260125.2]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000226803.9]
WARNING, no entry stored in dbm for [ENSG00000176840.12]
WARNING, no entry stored in dbm for [ENSG00000240498.9]
WARNING, no entry stored in dbm for [ENSG00000237126.8]
WARNING, no entry stored in dbm for [ENSG00000241684.6]
WARNING, no entry stored in dbm for [ENSG00000274376.4]
WARNING, no entry stored in dbm for [ENSG00000218475.2]
WARNING, no entry stored in dbm for [ENSG00000235989.4]
WARNING, no entry stored in dbm for [ENSG00000242068.1]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000277702.1]
WARNING, no entry stored in dbm for [ENSG00000277702.1]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000272150.5]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000271623.1]
WARNING, no entry stored in dbm for [ENSG00000259833.5]
WARNING, no entry stored in dbm for [ENSG00000261273.1]
WARNING, no entry stored in dbm for [ENSG00000260413.1]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000233170.4]
WARNING, no entry stored in dbm for [ENSG00000278341.1]
WARNING, no entry stored in dbm for [ENSG00000261719.1]
WARNING, no entry stored in dbm for [ENSG00000250999.2]
WARNING, no entry stored in dbm for [ENSG00000279880.1]
WARNING, no entry stored in dbm for [ENSG00000198555.7]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000219410.6]
WARNING, no entry stored in dbm for [ENSG00000225662.2]
WARNING, no entry stored in dbm for [ENSG00000249837.1]
WARNING, no entry stored in dbm for [ENSG00000240695.1]
WARNING, no entry stored in dbm for [ENSG00000244398.1]
WARNING, no entry stored in dbm for [ENSG00000242087.2]
WARNING, no entry stored in dbm for [ENSG00000236722.1]
WARNING, no entry stored in dbm for [ENSG00000235881.2]
WARNING, no entry stored in dbm for [ENSG00000287632.1]
WARNING, no entry stored in dbm for [ENSG00000285454.1]
WARNING, no entry stored in dbm for [ENSG00000224011.1]
WARNING, no entry stored in dbm for [ENSG00000250256.1]
WARNING, no entry stored in dbm for [ENSG00000249951.1]
WARNING, no entry stored in dbm for [ENSG00000227077.3]
WARNING, no entry stored in dbm for [ENSG00000227077.3]
WARNING, no entry stored in dbm for [ENSG00000250159.7]
WARNING, no entry stored in dbm for [ENSG00000243314.1]
WARNING, no entry stored in dbm for [ENSG00000286830.1]
WARNING, no entry stored in dbm for [ENSG00000260037.5]
WARNING, no entry stored in dbm for [ENSG00000244063.1]
WARNING, no entry stored in dbm for [ENSG00000224479.6]
WARNING, no entry stored in dbm for [ENSG00000254035.1]
WARNING, no entry stored in dbm for [ENSG00000260236.1]
WARNING, no entry stored in dbm for [ENSG00000224521.2]
WARNING, no entry stored in dbm for [ENSG00000286358.1]
WARNING, no entry stored in dbm for [ENSG00000279333.1]
WARNING, no entry stored in dbm for [ENSG00000249392.1]
WARNING, no entry stored in dbm for [ENSG00000228303.1]
WARNING, no entry stored in dbm for [ENSG00000249741.2]
WARNING, no entry stored in dbm for [ENSG00000240459.2]
WARNING, no entry stored in dbm for [ENSG00000225605.3]
WARNING, no entry stored in dbm for [ENSG00000236773.1]
WARNING, no entry stored in dbm for [ENSG00000282057.1]
WARNING, no entry stored in dbm for [ENSG00000245059.2]
WARNING, no entry stored in dbm for [ENSG00000237838.1]
WARNING, no entry stored in dbm for [ENSG00000268362.6]
WARNING, no entry stored in dbm for [ENSG00000279294.1]
WARNING, no entry stored in dbm for [ENSG00000288620.1]
WARNING, no entry stored in dbm for [ENSG00000239969.5]
WARNING, no entry stored in dbm for [ENSG00000267198.1]
WARNING, no entry stored in dbm for [ENSG00000131484.4]
WARNING, no entry stored in dbm for [ENSG00000265936.1]
WARNING, no entry stored in dbm for [ENSG00000214259.3]
WARNING, no entry stored in dbm for [ENSG00000259363.6]
WARNING, no entry stored in dbm for [ENSG00000253107.1]
WARNING, no entry stored in dbm for [ENSG00000176349.11]
WARNING, no entry stored in dbm for [ENSG00000253107.1]
WARNING, no entry stored in dbm for [ENSG00000176349.11]
WARNING, no entry stored in dbm for [ENSG00000253107.1]
WARNING, no entry stored in dbm for [ENSG00000176349.11]
WARNING, no entry stored in dbm for [ENSG00000253107.1]
WARNING, no entry stored in dbm for [ENSG00000176349.11]
WARNING, no entry stored in dbm for [ENSG00000278867.1]
WARNING, no entry stored in dbm for [ENSG00000261848.5]
WARNING, no entry stored in dbm for [ENSG00000250007.7]
WARNING, no entry stored in dbm for [ENSG00000250007.7]
WARNING, no entry stored in dbm for [ENSG00000213144.2]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000237666.2]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000266931.2]
WARNING, no entry stored in dbm for [ENSG00000231781.1]
WARNING, no entry stored in dbm for [ENSG00000286520.1]
WARNING, no entry stored in dbm for [ENSG00000234072.1]
WARNING, no entry stored in dbm for [ENSG00000234129.8]
WARNING, no entry stored in dbm for [ENSG00000217455.8]
WARNING, no entry stored in dbm for [ENSG00000283537.2]
WARNING, no entry stored in dbm for [ENSG00000231359.3]
WARNING, no entry stored in dbm for [ENSG00000213942.3]
WARNING, no entry stored in dbm for [ENSG00000273257.2]
WARNING, no entry stored in dbm for [ENSG00000287388.1]
WARNING, no entry stored in dbm for [ENSG00000287763.1]
WARNING, no entry stored in dbm for [ENSG00000230964.1]
WARNING, no entry stored in dbm for [ENSG00000237087.1]
WARNING, no entry stored in dbm for [ENSG00000212664.5]
WARNING, no entry stored in dbm for [ENSG00000230559.1]
WARNING, no entry stored in dbm for [ENSG00000237856.1]
WARNING, no entry stored in dbm for [ENSG00000240752.1]
WARNING, no entry stored in dbm for [ENSG00000261386.2]
WARNING, no entry stored in dbm for [ENSG00000259945.1]
WARNING, no entry stored in dbm for [ENSG00000279123.1]
WARNING, no entry stored in dbm for [ENSG00000213527.5]
WARNING, no entry stored in dbm for [ENSG00000256694.1]
WARNING, no entry stored in dbm for [ENSG00000259563.1]
WARNING, no entry stored in dbm for [ENSG00000260413.1]
WARNING, no entry stored in dbm for [ENSG00000261273.1]
WARNING, no entry stored in dbm for [ENSG00000250764.1]
WARNING, no entry stored in dbm for [ENSG00000215068.8]
WARNING, no entry stored in dbm for [ENSG00000255910.2]
WARNING, no entry stored in dbm for [ENSG00000265845.2]
WARNING, no entry stored in dbm for [ENSG00000255621.1]
WARNING, no entry stored in dbm for [ENSG00000267601.1]
WARNING, no entry stored in dbm for [ENSG00000228261.1]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000265800.1]
WARNING, no entry stored in dbm for [ENSG00000260276.2]
WARNING, no entry stored in dbm for [ENSG00000272800.3]
WARNING, no entry stored in dbm for [ENSG00000287621.1]
WARNING, no entry stored in dbm for [ENSG00000240418.1]
WARNING, no entry stored in dbm for [ENSG00000249309.1]
WARNING, no entry stored in dbm for [ENSG00000229852.4]
WARNING, no entry stored in dbm for [ENSG00000268047.1]
WARNING, no entry stored in dbm for [ENSG00000287306.1]
WARNING, no entry stored in dbm for [ENSG00000269032.1]
WARNING, no entry stored in dbm for [ENSG00000253166.2]
WARNING, no entry stored in dbm for [ENSG00000286030.2]
WARNING, no entry stored in dbm for [ENSG00000264914.1]
WARNING, no entry stored in dbm for [ENSG00000255067.1]
WARNING, no entry stored in dbm for [ENSG00000203327.2]
WARNING, no entry stored in dbm for [ENSG00000269054.2]
WARNING, no entry stored in dbm for [ENSG00000268543.1]
WARNING, no entry stored in dbm for [ENSG00000243355.1]
WARNING, no entry stored in dbm for [ENSG00000240231.1]
WARNING, no entry stored in dbm for [ENSG00000261400.1]
WARNING, no entry stored in dbm for [ENSG00000249839.1]
WARNING, no entry stored in dbm for [ENSG00000286068.1]
WARNING, no entry stored in dbm for [ENSG00000259408.2]
WARNING, no entry stored in dbm for [ENSG00000269439.6]
WARNING, no entry stored in dbm for [ENSG00000268119.6]
WARNING, no entry stored in dbm for [ENSG00000277977.1]
WARNING, no entry stored in dbm for [ENSG00000268416.1]
WARNING, no entry stored in dbm for [ENSG00000235623.2]
WARNING, no entry stored in dbm for [ENSG00000240611.1]
WARNING, no entry stored in dbm for [ENSG00000259877.2]
WARNING, no entry stored in dbm for [ENSG00000214331.8]
WARNING, no entry stored in dbm for [ENSG00000260905.1]
WARNING, no entry stored in dbm for [ENSG00000279529.1]
WARNING, no entry stored in dbm for [ENSG00000276548.1]
WARNING, no entry stored in dbm for [ENSG00000158482.10]
WARNING, no entry stored in dbm for [ENSG00000161132.6]
WARNING, no entry stored in dbm for [ENSG00000260258.2]
WARNING, no entry stored in dbm for [ENSG00000277458.1]
WARNING, no entry stored in dbm for [ENSG00000188599.17]
WARNING, no entry stored in dbm for [ENSG00000279865.1]
WARNING, no entry stored in dbm for [ENSG00000196205.8]
WARNING, no entry stored in dbm for [ENSG00000223872.2]
WARNING, no entry stored in dbm for [ENSG00000284380.1]
WARNING, no entry stored in dbm for [ENSG00000276710.4]
WARNING, no entry stored in dbm for [ENSG00000233363.1]
WARNING, no entry stored in dbm for [ENSG00000235415.1]
WARNING, no entry stored in dbm for [ENSG00000273218.1]
WARNING, no entry stored in dbm for [ENSG00000262879.6]
WARNING, no entry stored in dbm for [ENSG00000262879.6]
WARNING, no entry stored in dbm for [ENSG00000272690.6]
WARNING, no entry stored in dbm for [ENSG00000274712.2]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000231203.1]
WARNING, no entry stored in dbm for [ENSG00000241057.2]
WARNING, no entry stored in dbm for [ENSG00000241057.2]
WARNING, no entry stored in dbm for [ENSG00000272655.2]
WARNING, no entry stored in dbm for [ENSG00000241057.2]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000254610.3]
WARNING, no entry stored in dbm for [ENSG00000241278.1]
WARNING, no entry stored in dbm for [ENSG00000272240.1]
WARNING, no entry stored in dbm for [ENSG00000273419.1]
WARNING, no entry stored in dbm for [ENSG00000228204.2]
WARNING, no entry stored in dbm for [ENSG00000254180.2]
WARNING, no entry stored in dbm for [ENSG00000268163.1]
WARNING, no entry stored in dbm for [ENSG00000285486.1]
WARNING, no entry stored in dbm for [ENSG00000276548.1]
WARNING, no entry stored in dbm for [ENSG00000267328.1]
WARNING, no entry stored in dbm for [ENSG00000259242.2]
WARNING, no entry stored in dbm for [ENSG00000218175.2]


	* STAR-Fusion complete.  See output: /tmp/nxf.XgHQzd6GtV/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)