Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8b/bd0d5ed6716e5005327cfda5745d7e/659_bUW-T1-TRNA-1_A23MVY2LT4_2.features.csv
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b5/ea69d4a388ec3606624d2bf9da932e/.command.sh
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b5/ea69d4a388ec3606624d2bf9da932e/.command.run
==> STAGING COMPLETE (3 inputs)
Predicting contamination for 1 sample(s)...
Detection threshold: VAF_p90 < 0.9999
Level estimation: contamination_pct = -215.87 * vaf_p90 + 215.65
659_bUW-T1-TRNA-1_A23MVY2LT4_2: vaf_p90=0.999677 -> CONTAMINATED (~0.0%)
Output saved to: 659_bUW-T1-TRNA-1_A23MVY2LT4_2.predictions.csv
Summary: 1/1 samples flagged as contaminated