AIH curated blacklist: matched 2 fusion rows (breakpoint_ID in qualified set)
================================================================================
ARRIBA FILTERING SUMMARY
================================================================================
Total fusions: 84
Pass (FILTER=PASS): 15 (17.9%)
Fail (FILTER=FAIL): 69 (82.1%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 2
All 2 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 13
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 11
confidence_below_min(medium<high): 7
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 7
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 4
total_reads_below_min(6.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 3
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 2
total_reads_below_min(5.0<8.0): 2
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 2
confidence_below_min(low<high): 2
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 2
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 1
total_reads_below_min(4.0<8.0): 1
Breakdown by confidence:
high: 15 pass, 8 fail (total: 23)
low: 0 pass, 44 fail (total: 44)
medium: 0 pass, 17 fail (total: 17)
Arriba filter: 84 rows -> 15 PASS; wrote 659_bCu-T1-TRNA-1_A23MVY2LT4_1.arriba.fusions.filtered.tsv and 659_bCu-T1-TRNA-1_A23MVY2LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: 659_bCu-T1-TRNA-1_A23MVY2LT4_1.arriba.fusions.filter_summary.txt