AIH curated blacklist: matched 7 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 230
Pass (FILTER=PASS): 30 (13.0%)
Fail (FILTER=FAIL): 200 (87.0%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 7
All 7 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 63
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 23
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 21
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 11
confidence_below_min(low<high): 11
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 11
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 8
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 8
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 6
total_reads_below_min(3.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 3
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 3
Breakdown by confidence:
high: 30 pass, 9 fail (total: 39)
low: 0 pass, 85 fail (total: 85)
medium: 0 pass, 106 fail (total: 106)
Arriba filter: 230 rows -> 30 PASS; wrote 659_cIX-T1-TRNA-1_A23MVY2LT4_2.arriba.fusions.filtered.tsv and 659_cIX-T1-TRNA-1_A23MVY2LT4_2.arriba.fusions.filtered_pass_only.tsv
Summary written to: 659_cIX-T1-TRNA-1_A23MVY2LT4_2.arriba.fusions.filter_summary.txt