AIH curated blacklist: matched 9 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 235
Pass (FILTER=PASS): 20 (8.5%)
Fail (FILTER=FAIL): 215 (91.5%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 9
All 9 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 86
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 22
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 18
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 16
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 13
confidence_below_min(low<high): 12
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 9
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 4
confidence_below_min(medium<high);aih_curated_blacklist: 4
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 3
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0);aih_curated_blacklist: 3
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 3
total_reads_below_min(7.0<8.0): 2
Breakdown by confidence:
high: 20 pass, 5 fail (total: 25)
low: 0 pass, 86 fail (total: 86)
medium: 0 pass, 124 fail (total: 124)
Arriba filter: 235 rows -> 20 PASS; wrote 659_dts-T1-TRNA-1_A23MVY2LT4_1.arriba.fusions.filtered.tsv and 659_dts-T1-TRNA-1_A23MVY2LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: 659_dts-T1-TRNA-1_A23MVY2LT4_1.arriba.fusions.filter_summary.txt