NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (659_bua-T1-TRNA-1_A23MVY2LT4_1) - dev_rna_exp0014_exp0015-73d51683 - Workflow Tracker

Runs
dev_rna_exp0..15-73d51683
Tasks
GATK4_MARKDUPLICATES (659_bua-T1-TRNA-1_A23MVY2LT4_1)

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Task Info

Status: succeeded
Hash: 284c67b91a22
Process: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES
Tag: 659_bua-T1-TRNA-1_A23MVY2LT4_1
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 0d/c2945b
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0d/c2945b86374cd9354a5dbd7017363e
Native ID: nf-0dc2945b86374cd9354a5dbd7017363e-1b981

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.5 / 2
Memory (peak / alloc): 116.9 GB / 148.0 GB
Process I/O (rchar / wchar): 56.6 GB / 37.6 GB
Disk I/O (read / write): 1.8 GB / 37.6 GB
Host: i-08d9c8fd0816a80a9 ( on-demand)

Runtime

Submitted: Jun 08, 2026 2:28:38 AM
Completed: Jun 08, 2026 3:09:18 AM
Total Duration: 40m 39s

Phases

Queue: 13s
Execution: 37m 54s
Stage/Unstage: 2m 32s

Attempt 1

Execution

Status: failed
Hash: 6b/56a8c3
Failure Reason: BackoffLimitExceeded ()
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6b/56a8c392fbb943208a5d6b3a97c955
Native ID: nf-6b56a8c392fbb943208a5d6b3a97c955-f1c62

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 74.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0486c5afe95cb675e ( spot)

Runtime

Submitted: Jun 08, 2026 1:40:37 AM
Completed: Jun 08, 2026 2:28:38 AM
Total Duration: 48m 0s

Phases

Queue: 48m 0s
Execution: -
Stage/Unstage: -