.command.err - Workdir - NFCORE_RNAFUSION:RNAFUSION:STARFUSION_WORKFLOW:STARFUSION (659_dcz-T1-TRNA-1_A23MVY2LT4_2)

File Info

Filename: .command.err
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8c/d7881acb060c3a5b9772e36239094f/.command.err
Size: 31.5 KB
Task: NFCORE_RNAFUSION:RNAFUSION:STARFUSION_WORKFLOW:STARFUSION (659_dcz-T1-TRNA-1_A23MVY2LT4_2)
Attempt
Content

-ctat genome lib [/tmp/nxf.ESCFcECzVz/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.ESCFcECzVz/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.ESCFcECzVz/./star-fusion.preliminary
-sample contains 60075557 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.ESCFcECzVz/ctat_genome_lib_build_dir  -J /tmp/nxf.ESCFcECzVz/659_dcz-T1-TRNA-1_A23MVY2LT4_2.Chimeric.out.junction  -O /tmp/nxf.ESCFcECzVz/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.ESCFcECzVz/659_dcz-T1-TRNA-1_A23MVY2LT4_2.Chimeric.out.junction
-building interval tree based on /tmp/nxf.ESCFcECzVz/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

[10000], rate=75000.00/min 
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[650000], rate=57352.94/min -building interval tree based on /tmp/nxf.ESCFcECzVz/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

[10000], rate=60000.00/min 
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[650000], rate=56358.38/min -building interval tree based on /tmp/nxf.ESCFcECzVz/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

[10000], rate=66666.67/min 
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[650000], rate=51451.19/min -building interval tree based on /tmp/nxf.ESCFcECzVz/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

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[650000], rate=48148.15/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.ESCFcECzVz/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.ESCFcECzVz/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.ESCFcECzVz/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.ESCFcECzVz/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.ESCFcECzVz/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 3000000.00 reads per min processed...  
 3000000.00 reads per min processed...  
 3000000.00 reads per min processed...  
 3428571.43 reads per min processed...  
 3333333.33 reads per min processed...  
 3272727.27 reads per min processed...  
 3230769.23 reads per min processed...  
 3200000.00 reads per min processed...  
 3176470.59 reads per min processed...  
 3157894.74 reads per min processed...  
 3142857.14 reads per min processed...  
 3130434.78 reads per min processed...  
 3120000.00 reads per min processed...  
 3230769.23 reads per min processed...  
 3214285.71 reads per min processed...  
 3310344.83 reads per min processed...  
 3290322.58 reads per min processed...  
 3272727.27 reads per min processed...  
 3257142.86 reads per min processed...  
 3333333.33 reads per min processed...  
 3315789.47 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.ESCFcECzVz/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.ESCFcECzVz/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.ESCFcECzVz/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.ESCFcECzVz/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.ESCFcECzVz/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.ESCFcECzVz/659_dcz-T1-TRNA-1_A23MVY2LT4_2.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.ESCFcECzVz/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.ESCFcECzVz/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.ESCFcECzVz/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -52926.139567
EM: Round [1] log likelihood: -52906.183744
EM: Round [2] log likelihood: -52897.111659
EM: Round [3] log likelihood: -52892.256291
EM: Round [4] log likelihood: -52889.513946
EM: Round [5] log likelihood: -52887.934137
EM: Round [6] log likelihood: -52887.006179
EM: Round [7] log likelihood: -52886.444655
EM: Round [8] log likelihood: -52886.091750
EM: Round [9] log likelihood: -52885.860840
EM: Round [10] log likelihood: -52885.703889
EM: Round [11] log likelihood: -52885.593591
EM: Round [12] log likelihood: -52885.513895
EM: Round [13] log likelihood: -52885.454999
EM: Round [14] log likelihood: -52885.410688
EM: Round [15] log likelihood: -52885.376872
EM: Round [16] log likelihood: -52885.350771
EM: Round [17] log likelihood: -52885.330441
EM: Round [18] log likelihood: -52885.314487
EM: Round [19] log likelihood: -52885.301890
EM: Round [20] log likelihood: -52885.291893
EM: Round [21] log likelihood: -52885.283923
EM: Round [22] log likelihood: -52885.277546
EM: Round [23] log likelihood: -52885.272426
EM: Round [24] log likelihood: -52885.268303
EM: Round [25] log likelihood: -52885.264974
EM: Round [26] log likelihood: -52885.262280
EM: Round [27] log likelihood: -52885.260095
EM: Round [28] log likelihood: -52885.258320
EM: Round [29] log likelihood: -52885.256875
EM: Round [30] log likelihood: -52885.255697
EM: Round [31] log likelihood: -52885.254735
EM: Round [32] log likelihood: -52885.253949
EM: Round [33] log likelihood: -52885.253305
EM: Round [34] log likelihood: -52885.252778
EM: Round [35] log likelihood: -52885.252345
EM: Round [36] log likelihood: -52885.251990
EM: Round [37] log likelihood: -52885.251698
EM: Round [38] log likelihood: -52885.251457
EM: Round [39] log likelihood: -52885.251260
EM: Round [40] log likelihood: -52885.251097
EM: Round [41] log likelihood: -52885.250962
EM: Round [42] log likelihood: -52885.250852
EM: Round [43] log likelihood: -52885.250760
EM: Stopping iterations at round 43 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -52921.602107
EM: Round [1] log likelihood: -52903.649214
EM: Round [2] log likelihood: -52895.548023
EM: Round [3] log likelihood: -52891.196446
EM: Round [4] log likelihood: -52888.738326
EM: Round [5] log likelihood: -52887.336038
EM: Round [6] log likelihood: -52886.530072
EM: Round [7] log likelihood: -52886.058742
EM: Round [8] log likelihood: -52885.775855
EM: Round [9] log likelihood: -52885.600936
EM: Round [10] log likelihood: -52885.489521
EM: Round [11] log likelihood: -52885.416596
EM: Round [12] log likelihood: -52885.367710
EM: Round [13] log likelihood: -52885.334265
EM: Round [14] log likelihood: -52885.310989
EM: Round [15] log likelihood: -52885.294558
EM: Round [16] log likelihood: -52885.282820
EM: Round [17] log likelihood: -52885.274351
EM: Round [18] log likelihood: -52885.268188
EM: Round [19] log likelihood: -52885.263672
EM: Round [20] log likelihood: -52885.260340
EM: Round [21] log likelihood: -52885.257870
EM: Round [22] log likelihood: -52885.256029
EM: Round [23] log likelihood: -52885.254651
EM: Round [24] log likelihood: -52885.253615
EM: Round [25] log likelihood: -52885.252835
EM: Round [26] log likelihood: -52885.252244
EM: Round [27] log likelihood: -52885.251795
EM: Round [28] log likelihood: -52885.251454
EM: Round [29] log likelihood: -52885.251193
EM: Round [30] log likelihood: -52885.250994
EM: Round [31] log likelihood: -52885.250841
EM: Round [32] log likelihood: -52885.250724
EM: Round [33] log likelihood: -52885.250634
EM: Stopping iterations at round 33 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.ESCFcECzVz/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.ESCFcECzVz/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.ESCFcECzVz/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.ESCFcECzVz/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.ESCFcECzVz/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.ESCFcECzVz/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.ESCFcECzVz/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.ESCFcECzVz/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.ESCFcECzVz/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.ESCFcECzVz/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.ESCFcECzVz/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.ESCFcECzVz/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.ESCFcECzVz/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.ESCFcECzVz/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 60075557 > /tmp/nxf.ESCFcECzVz/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.ESCFcECzVz/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.ESCFcECzVz/ctat_genome_lib_build_dir > /tmp/nxf.ESCFcECzVz/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.ESCFcECzVz/ctat_genome_lib_build_dir --annotate /tmp/nxf.ESCFcECzVz/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.ESCFcECzVz/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.ESCFcECzVz/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.ESCFcECzVz/ctat_genome_lib_build_dir
-done, see /tmp/nxf.ESCFcECzVz/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.ESCFcECzVz/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.ESCFcECzVz/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 675, filtered: 5266)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.ESCFcECzVz/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.ESCFcECzVz/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.ESCFcECzVz/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000225851.1]
WARNING, no entry stored in dbm for [ENSG00000254485.5]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000245958.6]
WARNING, no entry stored in dbm for [ENSG00000239268.3]
WARNING, no entry stored in dbm for [ENSG00000225594.1]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000225292.2]
WARNING, no entry stored in dbm for [ENSG00000226823.1]
WARNING, no entry stored in dbm for [ENSG00000181577.16]
WARNING, no entry stored in dbm for [ENSG00000180747.15]
WARNING, no entry stored in dbm for [ENSG00000172965.17]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000286021.2]
WARNING, no entry stored in dbm for [ENSG00000215386.13]
WARNING, no entry stored in dbm for [ENSG00000256612.7]
WARNING, no entry stored in dbm for [ENSG00000130612.16]
WARNING, no entry stored in dbm for [ENSG00000251314.2]
WARNING, no entry stored in dbm for [ENSG00000248126.1]
WARNING, no entry stored in dbm for [ENSG00000281896.1]
WARNING, no entry stored in dbm for [ENSG00000257337.7]
WARNING, no entry stored in dbm for [ENSG00000285606.1]
WARNING, no entry stored in dbm for [ENSG00000277500.1]
WARNING, no entry stored in dbm for [ENSG00000245694.10]
WARNING, no entry stored in dbm for [ENSG00000272463.1]
WARNING, no entry stored in dbm for [ENSG00000237004.4]
WARNING, no entry stored in dbm for [ENSG00000133624.13]
WARNING, no entry stored in dbm for [ENSG00000236491.1]
WARNING, no entry stored in dbm for [ENSG00000213279.2]
WARNING, no entry stored in dbm for [ENSG00000181577.16]
WARNING, no entry stored in dbm for [ENSG00000250980.1]
WARNING, no entry stored in dbm for [ENSG00000261174.2]
WARNING, no entry stored in dbm for [ENSG00000237372.4]
WARNING, no entry stored in dbm for [ENSG00000212951.5]
WARNING, no entry stored in dbm for [ENSG00000235954.7]
WARNING, no entry stored in dbm for [ENSG00000182912.6]
WARNING, no entry stored in dbm for [ENSG00000249921.2]
WARNING, no entry stored in dbm for [ENSG00000224078.15]
WARNING, no entry stored in dbm for [ENSG00000234537.1]
WARNING, no entry stored in dbm for [ENSG00000269794.1]
WARNING, no entry stored in dbm for [ENSG00000284977.2]
WARNING, no entry stored in dbm for [ENSG00000187621.15]
WARNING, no entry stored in dbm for [ENSG00000235277.1]
WARNING, no entry stored in dbm for [ENSG00000218359.1]
WARNING, no entry stored in dbm for [ENSG00000237645.1]
WARNING, no entry stored in dbm for [ENSG00000263821.1]
WARNING, no entry stored in dbm for [ENSG00000232956.9]
WARNING, no entry stored in dbm for [ENSG00000224078.15]
WARNING, no entry stored in dbm for [ENSG00000228784.9]
WARNING, no entry stored in dbm for [ENSG00000232803.1]
WARNING, no entry stored in dbm for [ENSG00000215790.8]
WARNING, no entry stored in dbm for [ENSG00000251562.8]
WARNING, no entry stored in dbm for [ENSG00000245958.6]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000287411.1]
WARNING, no entry stored in dbm for [ENSG00000281131.1]
WARNING, no entry stored in dbm for [ENSG00000227681.5]
WARNING, no entry stored in dbm for [ENSG00000227681.5]
WARNING, no entry stored in dbm for [ENSG00000234797.5]
WARNING, no entry stored in dbm for [ENSG00000189343.7]
WARNING, no entry stored in dbm for [ENSG00000258441.1]
WARNING, no entry stored in dbm for [ENSG00000240494.2]
WARNING, no entry stored in dbm for [ENSG00000241462.1]
WARNING, no entry stored in dbm for [ENSG00000225404.2]
WARNING, no entry stored in dbm for [ENSG00000272834.1]
WARNING, no entry stored in dbm for [ENSG00000213432.2]
WARNING, no entry stored in dbm for [ENSG00000241088.2]
WARNING, no entry stored in dbm for [ENSG00000230559.1]
WARNING, no entry stored in dbm for [ENSG00000243855.1]
WARNING, no entry stored in dbm for [ENSG00000234524.1]
WARNING, no entry stored in dbm for [ENSG00000229824.1]
WARNING, no entry stored in dbm for [ENSG00000202058.1]
WARNING, no entry stored in dbm for [ENSG00000202406.1]
WARNING, no entry stored in dbm for [ENSG00000287251.1]
WARNING, no entry stored in dbm for [ENSG00000268592.3]
WARNING, no entry stored in dbm for [ENSG00000228526.7]
WARNING, no entry stored in dbm for [ENSG00000204055.5]
WARNING, no entry stored in dbm for [ENSG00000248927.1]
WARNING, no entry stored in dbm for [ENSG00000270741.1]
WARNING, no entry stored in dbm for [ENSG00000228940.1]
WARNING, no entry stored in dbm for [ENSG00000214975.4]
WARNING, no entry stored in dbm for [ENSG00000272655.2]
WARNING, no entry stored in dbm for [ENSG00000173209.23]
WARNING, no entry stored in dbm for [ENSG00000241350.1]
WARNING, no entry stored in dbm for [ENSG00000230606.11]
WARNING, no entry stored in dbm for [ENSG00000154898.15]
WARNING, no entry stored in dbm for [ENSG00000286641.1]
WARNING, no entry stored in dbm for [ENSG00000255550.1]
WARNING, no entry stored in dbm for [ENSG00000265369.3]
WARNING, no entry stored in dbm for [ENSG00000237181.1]
WARNING, no entry stored in dbm for [ENSG00000231918.1]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000278867.1]
WARNING, no entry stored in dbm for [ENSG00000233079.3]
WARNING, no entry stored in dbm for [ENSG00000284224.1]
WARNING, no entry stored in dbm for [ENSG00000233006.8]
WARNING, no entry stored in dbm for [ENSG00000203709.12]
WARNING, no entry stored in dbm for [ENSG00000221540.1]
WARNING, no entry stored in dbm for [ENSG00000263142.5]
WARNING, no entry stored in dbm for [ENSG00000236021.2]
WARNING, no entry stored in dbm for [ENSG00000251562.8]
WARNING, no entry stored in dbm for [ENSG00000255618.2]
WARNING, no entry stored in dbm for [ENSG00000238212.3]
WARNING, no entry stored in dbm for [ENSG00000267135.2]
WARNING, no entry stored in dbm for [ENSG00000234634.2]
WARNING, no entry stored in dbm for [ENSG00000231171.4]
WARNING, no entry stored in dbm for [ENSG00000250056.8]
WARNING, no entry stored in dbm for [ENSG00000268658.5]
WARNING, no entry stored in dbm for [ENSG00000231061.1]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000287785.1]
WARNING, no entry stored in dbm for [ENSG00000218347.2]
WARNING, no entry stored in dbm for [ENSG00000255240.6]
WARNING, no entry stored in dbm for [ENSG00000219404.2]
WARNING, no entry stored in dbm for [ENSG00000262558.1]
WARNING, no entry stored in dbm for [ENSG00000211459.2]
WARNING, no entry stored in dbm for [ENSG00000179362.14]
WARNING, no entry stored in dbm for [ENSG00000225851.1]
WARNING, no entry stored in dbm for [ENSG00000204622.11]
WARNING, no entry stored in dbm for [ENSG00000233606.2]
WARNING, no entry stored in dbm for [ENSG00000230979.3]
WARNING, no entry stored in dbm for [ENSG00000225978.3]
WARNING, no entry stored in dbm for [ENSG00000206120.11]
WARNING, no entry stored in dbm for [ENSG00000250903.9]
WARNING, no entry stored in dbm for [ENSG00000244101.1]
WARNING, no entry stored in dbm for [ENSG00000240253.6]
WARNING, no entry stored in dbm for [ENSG00000248551.1]
WARNING, no entry stored in dbm for [ENSG00000272368.2]
WARNING, no entry stored in dbm for [ENSG00000226688.7]
WARNING, no entry stored in dbm for [ENSG00000287286.1]
WARNING, no entry stored in dbm for [ENSG00000184991.3]
WARNING, no entry stored in dbm for [ENSG00000176584.18]
WARNING, no entry stored in dbm for [ENSG00000286425.1]
WARNING, no entry stored in dbm for [ENSG00000256134.1]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000266179.2]
WARNING, no entry stored in dbm for [ENSG00000231607.13]
WARNING, no entry stored in dbm for [ENSG00000214826.5]
WARNING, no entry stored in dbm for [ENSG00000231890.8]
WARNING, no entry stored in dbm for [ENSG00000231890.8]
WARNING, no entry stored in dbm for [ENSG00000168405.17]
WARNING, no entry stored in dbm for [ENSG00000250433.1]
WARNING, no entry stored in dbm for [ENSG00000224411.3]
WARNING, no entry stored in dbm for [ENSG00000280356.1]
WARNING, no entry stored in dbm for [ENSG00000217643.1]
WARNING, no entry stored in dbm for [ENSG00000273312.2]
WARNING, no entry stored in dbm for [ENSG00000224660.2]
WARNING, no entry stored in dbm for [ENSG00000236830.7]
WARNING, no entry stored in dbm for [ENSG00000276530.1]
WARNING, no entry stored in dbm for [ENSG00000259425.5]
WARNING, no entry stored in dbm for [ENSG00000205959.4]
WARNING, no entry stored in dbm for [ENSG00000211459.2]
WARNING, no entry stored in dbm for [ENSG00000211459.2]
WARNING, no entry stored in dbm for [ENSG00000237250.3]
WARNING, no entry stored in dbm for [ENSG00000231290.6]
WARNING, no entry stored in dbm for [ENSG00000230006.7]
WARNING, no entry stored in dbm for [ENSG00000211459.2]
WARNING, no entry stored in dbm for [ENSG00000271581.1]
WARNING, no entry stored in dbm for [ENSG00000176998.4]
WARNING, no entry stored in dbm for [ENSG00000270780.1]
WARNING, no entry stored in dbm for [ENSG00000234589.4]
WARNING, no entry stored in dbm for [ENSG00000240219.1]
WARNING, no entry stored in dbm for [ENSG00000258926.2]
WARNING, no entry stored in dbm for [ENSG00000277270.2]
WARNING, no entry stored in dbm for [ENSG00000230490.3]
WARNING, no entry stored in dbm for [ENSG00000286650.1]
WARNING, no entry stored in dbm for [ENSG00000272084.1]
WARNING, no entry stored in dbm for [ENSG00000286063.1]
WARNING, no entry stored in dbm for [ENSG00000277460.1]
WARNING, no entry stored in dbm for [ENSG00000226310.1]
WARNING, no entry stored in dbm for [ENSG00000215022.7]
WARNING, no entry stored in dbm for [ENSG00000248994.2]
WARNING, no entry stored in dbm for [ENSG00000265018.6]
WARNING, no entry stored in dbm for [ENSG00000265749.6]
WARNING, no entry stored in dbm for [ENSG00000277702.1]
WARNING, no entry stored in dbm for [ENSG00000277146.1]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000240729.1]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000282508.2]
WARNING, no entry stored in dbm for [ENSG00000278928.1]
WARNING, no entry stored in dbm for [ENSG00000254111.3]
WARNING, no entry stored in dbm for [ENSG00000287209.1]
WARNING, no entry stored in dbm for [ENSG00000284648.1]
WARNING, no entry stored in dbm for [ENSG00000284610.1]
WARNING, no entry stored in dbm for [ENSG00000243620.2]
WARNING, no entry stored in dbm for [ENSG00000232537.2]
WARNING, no entry stored in dbm for [ENSG00000276538.1]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000213280.2]
WARNING, no entry stored in dbm for [ENSG00000267408.1]
WARNING, no entry stored in dbm for [ENSG00000286976.1]
WARNING, no entry stored in dbm for [ENSG00000279675.1]
WARNING, no entry stored in dbm for [ENSG00000287504.1]
WARNING, no entry stored in dbm for [ENSG00000249258.2]
WARNING, no entry stored in dbm for [ENSG00000236501.6]
WARNING, no entry stored in dbm for [ENSG00000288663.1]
WARNING, no entry stored in dbm for [ENSG00000229212.8]
WARNING, no entry stored in dbm for [ENSG00000240535.8]
WARNING, no entry stored in dbm for [ENSG00000280214.1]
WARNING, no entry stored in dbm for [ENSG00000223628.2]
WARNING, no entry stored in dbm for [ENSG00000231414.1]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000264790.1]
WARNING, no entry stored in dbm for [ENSG00000256967.1]
WARNING, no entry stored in dbm for [ENSG00000281896.1]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000269032.1]
WARNING, no entry stored in dbm for [ENSG00000223508.5]
WARNING, no entry stored in dbm for [ENSG00000261775.1]
WARNING, no entry stored in dbm for [ENSG00000267383.7]
WARNING, no entry stored in dbm for [ENSG00000286489.1]
WARNING, no entry stored in dbm for [ENSG00000238045.9]
WARNING, no entry stored in dbm for [ENSG00000284671.1]
WARNING, no entry stored in dbm for [ENSG00000269604.1]
WARNING, no entry stored in dbm for [ENSG00000272219.1]
WARNING, no entry stored in dbm for [ENSG00000243554.1]
WARNING, no entry stored in dbm for [ENSG00000238228.1]
WARNING, no entry stored in dbm for [ENSG00000267698.1]
WARNING, no entry stored in dbm for [ENSG00000226616.1]


	* STAR-Fusion complete.  See output: /tmp/nxf.ESCFcECzVz/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)