Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f3/9a877395d776ae873b22a61b4fedf4/659_bQZ-T1-TRNA-1_A23MVY2LT4_2.Chimeric.out.junction
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/86/20be35404546e7cae8aa0a374dddb7/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/86/20be35404546e7cae8aa0a374dddb7/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/db/c86fc9aa3053f57109dd6c2e7c9b3f/659_bQZ-T1-TRNA-1_A23MVY2LT4_2_2.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/db/c86fc9aa3053f57109dd6c2e7c9b3f/659_bQZ-T1-TRNA-1_A23MVY2LT4_2_1.fastp.fastq.gz
==> STAGING COMPLETE (6 inputs)

-ctat genome lib [/tmp/nxf.1ZS8k1DfQp/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.1ZS8k1DfQp/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.1ZS8k1DfQp/./star-fusion.preliminary
-sample contains 295148467 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.1ZS8k1DfQp/ctat_genome_lib_build_dir  -J /tmp/nxf.1ZS8k1DfQp/659_bQZ-T1-TRNA-1_A23MVY2LT4_2.Chimeric.out.junction  -O /tmp/nxf.1ZS8k1DfQp/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.1ZS8k1DfQp/659_bQZ-T1-TRNA-1_A23MVY2LT4_2.Chimeric.out.junction
-building interval tree based on /tmp/nxf.1ZS8k1DfQp/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.12 min).
-mapping reads to genes

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[2770000], rate=55753.10/min -building interval tree based on /tmp/nxf.1ZS8k1DfQp/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

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[2500000], rate=50420.17/min 
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[2550000], rate=50561.80/min 
[2560000], rate=50592.89/min 
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[2580000], rate=50720.84/min 
[2590000], rate=50784.31/min 
[2600000], rate=50864.04/min 
[2610000], rate=50926.83/min 
[2620000], rate=51022.40/min 
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[2640000], rate=51212.42/min 
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[2740000], rate=52074.75/min 
[2750000], rate=52034.06/min 
[2760000], rate=51993.72/min 
[2770000], rate=51986.24/min -building interval tree based on /tmp/nxf.1ZS8k1DfQp/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

[10000], rate=66666.67/min 
[20000], rate=75000.00/min 
[30000], rate=75000.00/min 
[40000], rate=77419.35/min 
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[1460000], rate=51499.12/min 
[1470000], rate=51639.34/min 
[1480000], rate=51778.43/min 
[1490000], rate=51916.38/min 
[1500000], rate=52053.21/min 
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[1550000], rate=52100.84/min 
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[1760000], rate=46254.93/min 
[1770000], rate=46173.91/min 
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[1800000], rate=46094.75/min 
[1810000], rate=46055.98/min 
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[1850000], rate=46038.99/min 
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[1980000], rate=46716.48/min 
[1990000], rate=46805.17/min 
[2000000], rate=46911.65/min 
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[2060000], rate=47121.62/min 
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[2100000], rate=47368.42/min 
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[2270000], rate=48059.28/min 
[2280000], rate=48067.46/min 
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[2520000], rate=49687.81/min 
[2530000], rate=49770.49/min 
[2540000], rate=49869.11/min 
[2550000], rate=49951.03/min 
[2560000], rate=50032.57/min 
[2570000], rate=50097.47/min 
[2580000], rate=50194.55/min 
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[2600000], rate=50338.82/min 
[2610000], rate=50418.54/min 
[2620000], rate=50497.91/min 
[2630000], rate=50576.92/min 
[2640000], rate=50671.79/min 
[2650000], rate=50750.08/min 
[2660000], rate=50828.03/min 
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[2680000], rate=50518.38/min 
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[2700000], rate=50294.94/min 
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[2720000], rate=50122.85/min 
[2730000], rate=50030.54/min 
[2740000], rate=49939.25/min 
[2750000], rate=49864.01/min -building interval tree based on /tmp/nxf.1ZS8k1DfQp/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

[10000], rate=66666.67/min 
[20000], rate=75000.00/min 
[30000], rate=94736.84/min 
[40000], rate=120000.00/min 
[50000], rate=136363.64/min 
[60000], rate=163636.36/min 
[70000], rate=190909.09/min 
[80000], rate=218181.82/min 
[90000], rate=234782.61/min 
[100000], rate=214285.71/min 
[110000], rate=227586.21/min 
[120000], rate=240000.00/min 
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[150000], rate=191489.36/min 
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[940000], rate=27154.55/min 
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[1200000], rate=30087.76/min 
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[1440000], rate=32864.21/min 
[1450000], rate=32942.07/min 
[1460000], rate=33056.60/min 
[1470000], rate=33170.36/min 
[1480000], rate=33295.84/min 
[1490000], rate=33408.07/min 
[1500000], rate=33532.04/min 
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[1540000], rate=34020.62/min 
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[1680000], rate=36038.61/min 
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[1700000], rate=36324.79/min 
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[1720000], rate=36556.85/min 
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[1740000], rate=36452.51/min 
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[1800000], rate=36278.13/min 
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[2000000], rate=36396.72/min 
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[2200000], rate=37468.07/min 
[2210000], rate=37531.84/min 
[2220000], rate=37616.49/min 
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[2240000], rate=37763.42/min 
[2250000], rate=37846.93/min 
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[2340000], rate=38720.35/min 
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[2380000], rate=38931.30/min 
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[2540000], rate=39430.79/min 
[2550000], rate=39473.68/min 
[2560000], rate=39516.34/min 
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[2590000], rate=39622.64/min 
[2600000], rate=39664.38/min 
[2610000], rate=39705.88/min 
[2620000], rate=39747.16/min 
[2630000], rate=39788.20/min 
[2640000], rate=39839.03/min 
[2650000], rate=39899.62/min 
[2660000], rate=39959.94/min 
[2670000], rate=40019.99/min 
[2680000], rate=40089.75/min 
[2690000], rate=40159.24/min 
[2700000], rate=40228.46/min 
[2710000], rate=40297.40/min 
[2720000], rate=40386.04/min 
[2730000], rate=40464.43/min 
[2740000], rate=40542.54/min 
[2750000], rate=40620.38/min 
[2760000], rate=40707.96/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.1ZS8k1DfQp/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.1ZS8k1DfQp/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.1ZS8k1DfQp/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.1ZS8k1DfQp/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.1ZS8k1DfQp/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 6000000.00 reads per min processed...  
 12000000.00 reads per min processed...  
 18000000.00 reads per min processed...  
 12000000.00 reads per min processed...  
 10000000.00 reads per min processed...  
 7200000.00 reads per min processed...  
 7000000.00 reads per min processed...  
 6000000.00 reads per min processed...  
 6000000.00 reads per min processed...  
 6000000.00 reads per min processed...  
 6000000.00 reads per min processed...  
 5538461.54 reads per min processed...  
 5571428.57 reads per min processed...  
 5600000.00 reads per min processed...  
 5294117.65 reads per min processed...  
 5333333.33 reads per min processed...  
 5368421.05 reads per min processed...  
 5142857.14 reads per min processed...  
 5181818.18 reads per min processed...  
 5217391.30 reads per min processed...  
 5040000.00 reads per min processed...  
 5076923.08 reads per min processed...  
 5111111.11 reads per min processed...  
 4965517.24 reads per min processed...  
 5000000.00 reads per min processed...  
 4875000.00 reads per min processed...  
 4909090.91 reads per min processed...  
 4800000.00 reads per min processed...  
 4833333.33 reads per min processed...  
 4736842.11 reads per min processed...  
 4769230.77 reads per min processed...  
 4682926.83 reads per min processed...  
 4714285.71 reads per min processed...  
 4744186.05 reads per min processed...  
 4772727.27 reads per min processed...  
 4695652.17 reads per min processed...  
 4723404.26 reads per min processed...  
 4750000.00 reads per min processed...  
 4775510.20 reads per min processed...  
 4800000.00 reads per min processed...  
 4730769.23 reads per min processed...  
 4754716.98 reads per min processed...  
 4777777.78 reads per min processed...  
 4800000.00 reads per min processed...  
 4736842.11 reads per min processed...  
 4758620.69 reads per min processed...  
 4779661.02 reads per min processed...  
 4800000.00 reads per min processed...  
 4741935.48 reads per min processed...  
 4761904.76 reads per min processed...  
 4781250.00 reads per min processed...  
 4800000.00 reads per min processed...  
 4818181.82 reads per min processed...  
 4835820.90 reads per min processed...  
 4852941.18 reads per min processed...  
 4941176.47 reads per min processed...  
 4885714.29 reads per min processed...  
 4901408.45 reads per min processed...  
 4916666.67 reads per min processed...  
 4864864.86 reads per min processed...  
 4880000.00 reads per min processed...  
 4894736.84 reads per min processed...  
 4846153.85 reads per min processed...  
 4860759.49 reads per min processed...  
 4875000.00 reads per min processed...  
 4888888.89 reads per min processed...  
 4902439.02 reads per min processed...  
 4857142.86 reads per min processed...  
 4870588.24 reads per min processed...  
 4827586.21 reads per min processed...  
 4840909.09 reads per min processed...  
 4853932.58 reads per min processed...  
 4813186.81 reads per min processed...  
 4826086.96 reads per min processed...  
 4838709.68 reads per min processed...  
 4800000.00 reads per min processed...  
 4812500.00 reads per min processed...  
 4824742.27 reads per min processed...  
 4836734.69 reads per min processed...  
 4848484.85 reads per min processed...  
 4811881.19 reads per min processed...  
 4823529.41 reads per min processed...  
 4834951.46 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.1ZS8k1DfQp/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.1ZS8k1DfQp/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.1ZS8k1DfQp/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.1ZS8k1DfQp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.1ZS8k1DfQp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.1ZS8k1DfQp/659_bQZ-T1-TRNA-1_A23MVY2LT4_2.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.1ZS8k1DfQp/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.1ZS8k1DfQp/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.1ZS8k1DfQp/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -433731.371358
EM: Round [1] log likelihood: -433517.576842
EM: Round [2] log likelihood: -433449.836941
EM: Round [3] log likelihood: -433419.383873
EM: Round [4] log likelihood: -433403.514117
EM: Round [5] log likelihood: -433394.533559
EM: Round [6] log likelihood: -433389.122393
EM: Round [7] log likelihood: -433385.669648
EM: Round [8] log likelihood: -433383.344878
EM: Round [9] log likelihood: -433381.701531
EM: Round [10] log likelihood: -433380.489772
EM: Round [11] log likelihood: -433379.564005
EM: Round [12] log likelihood: -433378.835782
EM: Round [13] log likelihood: -433378.249132
EM: Round [14] log likelihood: -433377.767235
EM: Round [15] log likelihood: -433377.364993
EM: Round [16] log likelihood: -433377.024742
EM: Round [17] log likelihood: -433376.733692
EM: Round [18] log likelihood: -433376.482354
EM: Round [19] log likelihood: -433376.263532
EM: Round [20] log likelihood: -433376.071666
EM: Round [21] log likelihood: -433375.902389
EM: Round [22] log likelihood: -433375.752222
EM: Round [23] log likelihood: -433375.618357
EM: Round [24] log likelihood: -433375.498499
EM: Round [25] log likelihood: -433375.390759
EM: Round [26] log likelihood: -433375.293562
EM: Round [27] log likelihood: -433375.205589
EM: Round [28] log likelihood: -433375.125725
EM: Round [29] log likelihood: -433375.053020
EM: Round [30] log likelihood: -433374.986664
EM: Round [31] log likelihood: -433374.925957
EM: Round [32] log likelihood: -433374.870296
EM: Round [33] log likelihood: -433374.819156
EM: Round [34] log likelihood: -433374.772080
EM: Round [35] log likelihood: -433374.728667
EM: Round [36] log likelihood: -433374.688566
EM: Round [37] log likelihood: -433374.651465
EM: Round [38] log likelihood: -433374.617089
EM: Round [39] log likelihood: -433374.585195
EM: Round [40] log likelihood: -433374.555566
EM: Round [41] log likelihood: -433374.528007
EM: Round [42] log likelihood: -433374.502344
EM: Round [43] log likelihood: -433374.478422
EM: Round [44] log likelihood: -433374.456100
EM: Round [45] log likelihood: -433374.435253
EM: Round [46] log likelihood: -433374.415764
EM: Round [47] log likelihood: -433374.397532
EM: Round [48] log likelihood: -433374.380461
EM: Round [49] log likelihood: -433374.364465
EM: Round [50] log likelihood: -433374.349468
EM: Round [51] log likelihood: -433374.335397
EM: Round [52] log likelihood: -433374.322188
EM: Round [53] log likelihood: -433374.309780
EM: Round [54] log likelihood: -433374.298118
EM: Round [55] log likelihood: -433374.287153
EM: Round [56] log likelihood: -433374.276837
EM: Round [57] log likelihood: -433374.267128
EM: Round [58] log likelihood: -433374.257985
EM: Round [59] log likelihood: -433374.249374
EM: Round [60] log likelihood: -433374.241259
EM: Round [61] log likelihood: -433374.233609
EM: Round [62] log likelihood: -433374.226395
EM: Round [63] log likelihood: -433374.219590
EM: Round [64] log likelihood: -433374.213169
EM: Round [65] log likelihood: -433374.207109
EM: Round [66] log likelihood: -433374.201386
EM: Round [67] log likelihood: -433374.195983
EM: Round [68] log likelihood: -433374.190878
EM: Round [69] log likelihood: -433374.186055
EM: Round [70] log likelihood: -433374.181497
EM: Round [71] log likelihood: -433374.177188
EM: Round [72] log likelihood: -433374.173114
EM: Round [73] log likelihood: -433374.169261
EM: Round [74] log likelihood: -433374.165617
EM: Round [75] log likelihood: -433374.162170
EM: Round [76] log likelihood: -433374.158909
EM: Round [77] log likelihood: -433374.155822
EM: Round [78] log likelihood: -433374.152900
EM: Round [79] log likelihood: -433374.150135
EM: Round [80] log likelihood: -433374.147516
EM: Round [81] log likelihood: -433374.145036
EM: Round [82] log likelihood: -433374.142688
EM: Round [83] log likelihood: -433374.140464
EM: Round [84] log likelihood: -433374.138357
EM: Round [85] log likelihood: -433374.136360
EM: Round [86] log likelihood: -433374.134469
EM: Round [87] log likelihood: -433374.132676
EM: Round [88] log likelihood: -433374.130977
EM: Round [89] log likelihood: -433374.129367
EM: Round [90] log likelihood: -433374.127841
EM: Round [91] log likelihood: -433374.126393
EM: Round [92] log likelihood: -433374.125021
EM: Round [93] log likelihood: -433374.123720
EM: Round [94] log likelihood: -433374.122486
EM: Round [95] log likelihood: -433374.121316
EM: Round [96] log likelihood: -433374.120206
EM: Round [97] log likelihood: -433374.119153
EM: Round [98] log likelihood: -433374.118154
EM: Round [99] log likelihood: -433374.117207
EM: Round [100] log likelihood: -433374.116307
EM: Round [101] log likelihood: -433374.115454
EM: Round [102] log likelihood: -433374.114645
EM: Round [103] log likelihood: -433374.113876
EM: Round [104] log likelihood: -433374.113147
EM: Round [105] log likelihood: -433374.112455
EM: Round [106] log likelihood: -433374.111798
EM: Round [107] log likelihood: -433374.111174
EM: Round [108] log likelihood: -433374.110582
EM: Round [109] log likelihood: -433374.110020
EM: Round [110] log likelihood: -433374.109487
EM: Round [111] log likelihood: -433374.108980
EM: Round [112] log likelihood: -433374.108499
EM: Round [113] log likelihood: -433374.108042
EM: Round [114] log likelihood: -433374.107608
EM: Round [115] log likelihood: -433374.107196
EM: Round [116] log likelihood: -433374.106804
EM: Round [117] log likelihood: -433374.106432
EM: Round [118] log likelihood: -433374.106079
EM: Round [119] log likelihood: -433374.105744
EM: Round [120] log likelihood: -433374.105425
EM: Round [121] log likelihood: -433374.105122
EM: Round [122] log likelihood: -433374.104834
EM: Round [123] log likelihood: -433374.104561
EM: Round [124] log likelihood: -433374.104301
EM: Round [125] log likelihood: -433374.104055
EM: Round [126] log likelihood: -433374.103820
EM: Round [127] log likelihood: -433374.103597
EM: Round [128] log likelihood: -433374.103385
EM: Round [129] log likelihood: -433374.103184
EM: Round [130] log likelihood: -433374.102993
EM: Round [131] log likelihood: -433374.102811
EM: Round [132] log likelihood: -433374.102638
EM: Round [133] log likelihood: -433374.102474
EM: Round [134] log likelihood: -433374.102318
EM: Round [135] log likelihood: -433374.102169
EM: Round [136] log likelihood: -433374.102028
EM: Round [137] log likelihood: -433374.101894
EM: Round [138] log likelihood: -433374.101767
EM: Round [139] log likelihood: -433374.101645
EM: Round [140] log likelihood: -433374.101530
EM: Round [141] log likelihood: -433374.101420
EM: Round [142] log likelihood: -433374.101316
EM: Round [143] log likelihood: -433374.101217
EM: Stopping iterations at round 143 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -432651.437244
EM: Round [1] log likelihood: -432479.110341
EM: Round [2] log likelihood: -432424.444030
EM: Round [3] log likelihood: -432399.932988
EM: Round [4] log likelihood: -432387.213774
EM: Round [5] log likelihood: -432380.068502
EM: Round [6] log likelihood: -432375.808067
EM: Round [7] log likelihood: -432373.124869
EM: Round [8] log likelihood: -432371.344519
EM: Round [9] log likelihood: -432370.104975
EM: Round [10] log likelihood: -432369.204464
EM: Round [11] log likelihood: -432368.526068
EM: Round [12] log likelihood: -432367.999261
EM: Round [13] log likelihood: -432367.579777
EM: Round [14] log likelihood: -432367.238746
EM: Round [15] log likelihood: -432366.956668
EM: Round [16] log likelihood: -432366.719946
EM: Round [17] log likelihood: -432366.518831
EM: Round [18] log likelihood: -432366.346159
EM: Round [19] log likelihood: -432366.196552
EM: Round [20] log likelihood: -432366.065894
EM: Round [21] log likelihood: -432365.950987
EM: Round [22] log likelihood: -432365.849306
EM: Round [23] log likelihood: -432365.758831
EM: Round [24] log likelihood: -432365.677929
EM: Round [25] log likelihood: -432365.605266
EM: Round [26] log likelihood: -432365.539739
EM: Round [27] log likelihood: -432365.480432
EM: Round [28] log likelihood: -432365.426575
EM: Round [29] log likelihood: -432365.377517
EM: Round [30] log likelihood: -432365.332706
EM: Round [31] log likelihood: -432365.291667
EM: Round [32] log likelihood: -432365.253995
EM: Round [33] log likelihood: -432365.219336
EM: Round [34] log likelihood: -432365.187385
EM: Round [35] log likelihood: -432365.157875
EM: Round [36] log likelihood: -432365.130571
EM: Round [37] log likelihood: -432365.105268
EM: Round [38] log likelihood: -432365.081784
EM: Round [39] log likelihood: -432365.059957
EM: Round [40] log likelihood: -432365.039644
EM: Round [41] log likelihood: -432365.020717
EM: Round [42] log likelihood: -432365.003063
EM: Round [43] log likelihood: -432364.986577
EM: Round [44] log likelihood: -432364.971168
EM: Round [45] log likelihood: -432364.956752
EM: Round [46] log likelihood: -432364.943254
EM: Round [47] log likelihood: -432364.930606
EM: Round [48] log likelihood: -432364.918745
EM: Round [49] log likelihood: -432364.907615
EM: Round [50] log likelihood: -432364.897164
EM: Round [51] log likelihood: -432364.887345
EM: Round [52] log likelihood: -432364.878114
EM: Round [53] log likelihood: -432364.869432
EM: Round [54] log likelihood: -432364.861262
EM: Round [55] log likelihood: -432364.853570
EM: Round [56] log likelihood: -432364.846326
EM: Round [57] log likelihood: -432364.839500
EM: Round [58] log likelihood: -432364.833066
EM: Round [59] log likelihood: -432364.827000
EM: Round [60] log likelihood: -432364.821278
EM: Round [61] log likelihood: -432364.815880
EM: Round [62] log likelihood: -432364.810784
EM: Round [63] log likelihood: -432364.805974
EM: Round [64] log likelihood: -432364.801432
EM: Round [65] log likelihood: -432364.797142
EM: Round [66] log likelihood: -432364.793089
EM: Round [67] log likelihood: -432364.789259
EM: Round [68] log likelihood: -432364.785640
EM: Round [69] log likelihood: -432364.782218
EM: Round [70] log likelihood: -432364.778982
EM: Round [71] log likelihood: -432364.775923
EM: Round [72] log likelihood: -432364.773029
EM: Round [73] log likelihood: -432364.770292
EM: Round [74] log likelihood: -432364.767702
EM: Round [75] log likelihood: -432364.765251
EM: Round [76] log likelihood: -432364.762931
EM: Round [77] log likelihood: -432364.760736
EM: Round [78] log likelihood: -432364.758658
EM: Round [79] log likelihood: -432364.756690
EM: Round [80] log likelihood: -432364.754828
EM: Round [81] log likelihood: -432364.753063
EM: Round [82] log likelihood: -432364.751393
EM: Round [83] log likelihood: -432364.749810
EM: Round [84] log likelihood: -432364.748312
EM: Round [85] log likelihood: -432364.746892
EM: Round [86] log likelihood: -432364.745546
EM: Round [87] log likelihood: -432364.744272
EM: Round [88] log likelihood: -432364.743064
EM: Round [89] log likelihood: -432364.741919
EM: Round [90] log likelihood: -432364.740835
EM: Round [91] log likelihood: -432364.739807
EM: Round [92] log likelihood: -432364.738832
EM: Round [93] log likelihood: -432364.737908
EM: Round [94] log likelihood: -432364.737033
EM: Round [95] log likelihood: -432364.736202
EM: Round [96] log likelihood: -432364.735415
EM: Round [97] log likelihood: -432364.734669
EM: Round [98] log likelihood: -432364.733961
EM: Round [99] log likelihood: -432364.733290
EM: Round [100] log likelihood: -432364.732654
EM: Round [101] log likelihood: -432364.732050
EM: Round [102] log likelihood: -432364.731478
EM: Round [103] log likelihood: -432364.730935
EM: Round [104] log likelihood: -432364.730420
EM: Round [105] log likelihood: -432364.729931
EM: Round [106] log likelihood: -432364.729468
EM: Round [107] log likelihood: -432364.729028
EM: Round [108] log likelihood: -432364.728611
EM: Round [109] log likelihood: -432364.728215
EM: Round [110] log likelihood: -432364.727840
EM: Round [111] log likelihood: -432364.727484
EM: Round [112] log likelihood: -432364.727146
EM: Round [113] log likelihood: -432364.726825
EM: Round [114] log likelihood: -432364.726520
EM: Round [115] log likelihood: -432364.726232
EM: Round [116] log likelihood: -432364.725957
EM: Round [117] log likelihood: -432364.725697
EM: Round [118] log likelihood: -432364.725450
EM: Round [119] log likelihood: -432364.725216
EM: Round [120] log likelihood: -432364.724993
EM: Round [121] log likelihood: -432364.724782
EM: Round [122] log likelihood: -432364.724582
EM: Round [123] log likelihood: -432364.724391
EM: Round [124] log likelihood: -432364.724211
EM: Round [125] log likelihood: -432364.724039
EM: Round [126] log likelihood: -432364.723876
EM: Round [127] log likelihood: -432364.723722
EM: Round [128] log likelihood: -432364.723575
EM: Round [129] log likelihood: -432364.723436
EM: Round [130] log likelihood: -432364.723303
EM: Round [131] log likelihood: -432364.723178
EM: Round [132] log likelihood: -432364.723058
EM: Round [133] log likelihood: -432364.722945
EM: Round [134] log likelihood: -432364.722838
EM: Round [135] log likelihood: -432364.722735
EM: Round [136] log likelihood: -432364.722638
EM: Stopping iterations at round 136 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.1ZS8k1DfQp/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.1ZS8k1DfQp/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.1ZS8k1DfQp/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.1ZS8k1DfQp/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.1ZS8k1DfQp/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.1ZS8k1DfQp/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.1ZS8k1DfQp/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.1ZS8k1DfQp/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.1ZS8k1DfQp/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.1ZS8k1DfQp/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.1ZS8k1DfQp/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.1ZS8k1DfQp/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.1ZS8k1DfQp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.1ZS8k1DfQp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 295148467 > /tmp/nxf.1ZS8k1DfQp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.1ZS8k1DfQp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.1ZS8k1DfQp/ctat_genome_lib_build_dir > /tmp/nxf.1ZS8k1DfQp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.1ZS8k1DfQp/ctat_genome_lib_build_dir --annotate /tmp/nxf.1ZS8k1DfQp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.1ZS8k1DfQp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.1ZS8k1DfQp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.1ZS8k1DfQp/ctat_genome_lib_build_dir
-done, see /tmp/nxf.1ZS8k1DfQp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.1ZS8k1DfQp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.1ZS8k1DfQp/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 3770, filtered: 12890)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.1ZS8k1DfQp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.1ZS8k1DfQp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.1ZS8k1DfQp/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
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WARNING, no entry stored in dbm for [ENSG00000253604.1]
WARNING, no entry stored in dbm for [ENSG00000265802.2]
WARNING, no entry stored in dbm for [ENSG00000261723.1]
WARNING, no entry stored in dbm for [ENSG00000229807.12]
WARNING, no entry stored in dbm for [ENSG00000234226.5]
WARNING, no entry stored in dbm for [ENSG00000260484.1]
WARNING, no entry stored in dbm for [ENSG00000168405.17]
WARNING, no entry stored in dbm for [ENSG00000224550.1]
WARNING, no entry stored in dbm for [ENSG00000234784.2]
WARNING, no entry stored in dbm for [ENSG00000261103.3]
WARNING, no entry stored in dbm for [ENSG00000230356.1]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000282742.1]
WARNING, no entry stored in dbm for [ENSG00000267749.1]
WARNING, no entry stored in dbm for [ENSG00000248477.6]
WARNING, no entry stored in dbm for [ENSG00000228271.2]
WARNING, no entry stored in dbm for [ENSG00000267858.6]
WARNING, no entry stored in dbm for [ENSG00000267858.6]
WARNING, no entry stored in dbm for [ENSG00000267858.6]
WARNING, no entry stored in dbm for [ENSG00000228118.3]
WARNING, no entry stored in dbm for [ENSG00000002079.14]
WARNING, no entry stored in dbm for [ENSG00000236051.7]
WARNING, no entry stored in dbm for [ENSG00000186076.5]
WARNING, no entry stored in dbm for [ENSG00000228323.2]
WARNING, no entry stored in dbm for [ENSG00000284130.1]
WARNING, no entry stored in dbm for [ENSG00000205360.6]
WARNING, no entry stored in dbm for [ENSG00000277287.1]
WARNING, no entry stored in dbm for [ENSG00000215866.8]
WARNING, no entry stored in dbm for [ENSG00000237238.3]
WARNING, no entry stored in dbm for [ENSG00000214955.5]
WARNING, no entry stored in dbm for [ENSG00000213777.5]
WARNING, no entry stored in dbm for [ENSG00000230979.3]
WARNING, no entry stored in dbm for [ENSG00000236301.5]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000230323.6]
WARNING, no entry stored in dbm for [ENSG00000197182.14]
WARNING, no entry stored in dbm for [ENSG00000259240.1]
WARNING, no entry stored in dbm for [ENSG00000264426.1]
WARNING, no entry stored in dbm for [ENSG00000203709.12]
WARNING, no entry stored in dbm for [ENSG00000247095.3]
WARNING, no entry stored in dbm for [ENSG00000221792.1]
WARNING, no entry stored in dbm for [ENSG00000270330.1]
WARNING, no entry stored in dbm for [ENSG00000257494.1]
WARNING, no entry stored in dbm for [ENSG00000253882.6]
WARNING, no entry stored in dbm for [ENSG00000283240.1]
WARNING, no entry stored in dbm for [ENSG00000196312.15]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000253557.6]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000231160.10]
WARNING, no entry stored in dbm for [ENSG00000239665.8]
WARNING, no entry stored in dbm for [ENSG00000224597.10]
WARNING, no entry stored in dbm for [ENSG00000230140.7]
WARNING, no entry stored in dbm for [ENSG00000287746.1]
WARNING, no entry stored in dbm for [ENSG00000227456.9]
WARNING, no entry stored in dbm for [ENSG00000243759.1]
WARNING, no entry stored in dbm for [ENSG00000286295.1]
WARNING, no entry stored in dbm for [ENSG00000248323.7]
WARNING, no entry stored in dbm for [ENSG00000224944.2]
WARNING, no entry stored in dbm for [ENSG00000258028.3]
WARNING, no entry stored in dbm for [ENSG00000260075.1]
WARNING, no entry stored in dbm for [ENSG00000100068.14]
WARNING, no entry stored in dbm for [ENSG00000133624.13]
WARNING, no entry stored in dbm for [ENSG00000236039.3]
WARNING, no entry stored in dbm for [ENSG00000285210.1]
WARNING, no entry stored in dbm for [ENSG00000231566.2]
WARNING, no entry stored in dbm for [ENSG00000260239.2]
WARNING, no entry stored in dbm for [ENSG00000250436.1]
WARNING, no entry stored in dbm for [ENSG00000203585.4]
WARNING, no entry stored in dbm for [ENSG00000249345.8]
WARNING, no entry stored in dbm for [ENSG00000238042.5]
WARNING, no entry stored in dbm for [ENSG00000251026.2]
WARNING, no entry stored in dbm for [ENSG00000239440.6]
WARNING, no entry stored in dbm for [ENSG00000241383.2]
WARNING, no entry stored in dbm for [ENSG00000261156.6]
WARNING, no entry stored in dbm for [ENSG00000234663.7]
WARNING, no entry stored in dbm for [ENSG00000234663.7]
WARNING, no entry stored in dbm for [ENSG00000228329.3]
WARNING, no entry stored in dbm for [ENSG00000226383.7]
WARNING, no entry stored in dbm for [ENSG00000231646.6]
WARNING, no entry stored in dbm for [ENSG00000266913.1]
WARNING, no entry stored in dbm for [ENSG00000229051.2]
WARNING, no entry stored in dbm for [ENSG00000198685.4]
WARNING, no entry stored in dbm for [ENSG00000225975.7]
WARNING, no entry stored in dbm for [ENSG00000235202.2]
WARNING, no entry stored in dbm for [ENSG00000229981.8]
WARNING, no entry stored in dbm for [ENSG00000228918.4]
WARNING, no entry stored in dbm for [ENSG00000229891.2]
WARNING, no entry stored in dbm for [ENSG00000235437.8]
WARNING, no entry stored in dbm for [ENSG00000281404.2]
WARNING, no entry stored in dbm for [ENSG00000175772.11]
WARNING, no entry stored in dbm for [ENSG00000242516.2]
WARNING, no entry stored in dbm for [ENSG00000256128.6]
WARNING, no entry stored in dbm for [ENSG00000188825.14]
WARNING, no entry stored in dbm for [ENSG00000188825.14]
WARNING, no entry stored in dbm for [ENSG00000235703.6]
WARNING, no entry stored in dbm for [ENSG00000225269.3]
WARNING, no entry stored in dbm for [ENSG00000285077.2]
WARNING, no entry stored in dbm for [ENSG00000225269.3]
WARNING, no entry stored in dbm for [ENSG00000233559.2]
WARNING, no entry stored in dbm for [ENSG00000227036.8]
WARNING, no entry stored in dbm for [ENSG00000281392.2]
WARNING, no entry stored in dbm for [ENSG00000235621.9]
WARNING, no entry stored in dbm for [ENSG00000232117.2]
WARNING, no entry stored in dbm for [ENSG00000232803.1]
WARNING, no entry stored in dbm for [ENSG00000226240.2]
WARNING, no entry stored in dbm for [ENSG00000179219.5]
WARNING, no entry stored in dbm for [ENSG00000188185.13]
WARNING, no entry stored in dbm for [ENSG00000225880.5]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000231721.7]
WARNING, no entry stored in dbm for [ENSG00000213016.3]
WARNING, no entry stored in dbm for [ENSG00000225329.3]
WARNING, no entry stored in dbm for [ENSG00000261192.1]
WARNING, no entry stored in dbm for [ENSG00000212664.5]
WARNING, no entry stored in dbm for [ENSG00000271579.1]
WARNING, no entry stored in dbm for [ENSG00000237211.2]
WARNING, no entry stored in dbm for [ENSG00000224699.9]
WARNING, no entry stored in dbm for [ENSG00000249353.2]
WARNING, no entry stored in dbm for [ENSG00000173209.23]
WARNING, no entry stored in dbm for [ENSG00000229320.3]
WARNING, no entry stored in dbm for [ENSG00000255177.2]
WARNING, no entry stored in dbm for [ENSG00000177359.20]
WARNING, no entry stored in dbm for [ENSG00000266820.1]
WARNING, no entry stored in dbm for [ENSG00000263647.1]
WARNING, no entry stored in dbm for [ENSG00000215790.8]
WARNING, no entry stored in dbm for [ENSG00000271147.8]
WARNING, no entry stored in dbm for [ENSG00000229358.3]
WARNING, no entry stored in dbm for [ENSG00000282572.2]
WARNING, no entry stored in dbm for [ENSG00000272911.1]
WARNING, no entry stored in dbm for [ENSG00000259993.1]
WARNING, no entry stored in dbm for [ENSG00000246174.9]
WARNING, no entry stored in dbm for [ENSG00000246174.9]
WARNING, no entry stored in dbm for [ENSG00000226009.2]
WARNING, no entry stored in dbm for [ENSG00000261143.1]
WARNING, no entry stored in dbm for [ENSG00000197536.11]
WARNING, no entry stored in dbm for [ENSG00000185641.6]
WARNING, no entry stored in dbm for [ENSG00000259020.3]
WARNING, no entry stored in dbm for [ENSG00000284676.1]
WARNING, no entry stored in dbm for [ENSG00000200156.1]
WARNING, no entry stored in dbm for [ENSG00000199568.1]
WARNING, no entry stored in dbm for [ENSG00000286675.1]
WARNING, no entry stored in dbm for [ENSG00000227908.3]
WARNING, no entry stored in dbm for [ENSG00000286848.1]
WARNING, no entry stored in dbm for [ENSG00000231636.1]
WARNING, no entry stored in dbm for [ENSG00000270318.1]
WARNING, no entry stored in dbm for [ENSG00000197476.3]
WARNING, no entry stored in dbm for [ENSG00000272168.8]
WARNING, no entry stored in dbm for [ENSG00000238231.2]
WARNING, no entry stored in dbm for [ENSG00000213430.6]
WARNING, no entry stored in dbm for [ENSG00000282100.1]
WARNING, no entry stored in dbm for [ENSG00000235838.1]
WARNING, no entry stored in dbm for [ENSG00000265933.5]
WARNING, no entry stored in dbm for [ENSG00000215283.3]
WARNING, no entry stored in dbm for [ENSG00000255391.1]
WARNING, no entry stored in dbm for [ENSG00000175147.13]
WARNING, no entry stored in dbm for [ENSG00000214922.9]
WARNING, no entry stored in dbm for [ENSG00000287390.1]
WARNING, no entry stored in dbm for [ENSG00000288663.1]
WARNING, no entry stored in dbm for [ENSG00000287516.1]
WARNING, no entry stored in dbm for [ENSG00000230979.3]
WARNING, no entry stored in dbm for [ENSG00000279066.1]
WARNING, no entry stored in dbm for [ENSG00000272267.2]
WARNING, no entry stored in dbm for [ENSG00000260790.1]
WARNING, no entry stored in dbm for [ENSG00000258570.1]
WARNING, no entry stored in dbm for [ENSG00000230228.2]
WARNING, no entry stored in dbm for [ENSG00000178458.5]
WARNING, no entry stored in dbm for [ENSG00000248205.1]
WARNING, no entry stored in dbm for [ENSG00000234571.2]
WARNING, no entry stored in dbm for [ENSG00000206417.8]
WARNING, no entry stored in dbm for [ENSG00000249400.1]
WARNING, no entry stored in dbm for [ENSG00000183666.17]
WARNING, no entry stored in dbm for [ENSG00000183666.17]
WARNING, no entry stored in dbm for [ENSG00000108448.22]
WARNING, no entry stored in dbm for [ENSG00000214544.7]
WARNING, no entry stored in dbm for [ENSG00000259503.1]
WARNING, no entry stored in dbm for [ENSG00000260604.2]
WARNING, no entry stored in dbm for [ENSG00000230662.1]
WARNING, no entry stored in dbm for [ENSG00000229807.12]
WARNING, no entry stored in dbm for [ENSG00000248752.3]
WARNING, no entry stored in dbm for [ENSG00000261824.7]
WARNING, no entry stored in dbm for [ENSG00000228393.4]
WARNING, no entry stored in dbm for [ENSG00000214433.4]
WARNING, no entry stored in dbm for [ENSG00000229608.1]
WARNING, no entry stored in dbm for [ENSG00000188101.5]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000244055.2]
WARNING, no entry stored in dbm for [ENSG00000254349.6]
WARNING, no entry stored in dbm for [ENSG00000234741.8]
WARNING, no entry stored in dbm for [ENSG00000234741.8]
WARNING, no entry stored in dbm for [ENSG00000237125.11]
WARNING, no entry stored in dbm for [ENSG00000249018.2]
WARNING, no entry stored in dbm for [ENSG00000230590.11]
WARNING, no entry stored in dbm for [ENSG00000230590.11]
WARNING, no entry stored in dbm for [ENSG00000230590.11]
WARNING, no entry stored in dbm for [ENSG00000283453.2]
WARNING, no entry stored in dbm for [ENSG00000231646.6]
WARNING, no entry stored in dbm for [ENSG00000287129.1]
WARNING, no entry stored in dbm for [ENSG00000224363.2]
WARNING, no entry stored in dbm for [ENSG00000242094.1]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000230409.3]
WARNING, no entry stored in dbm for [ENSG00000223695.1]
WARNING, no entry stored in dbm for [ENSG00000180211.5]
WARNING, no entry stored in dbm for [ENSG00000245849.8]
WARNING, no entry stored in dbm for [ENSG00000246596.7]
WARNING, no entry stored in dbm for [ENSG00000288056.1]
WARNING, no entry stored in dbm for [ENSG00000288663.1]
WARNING, no entry stored in dbm for [ENSG00000235501.6]
WARNING, no entry stored in dbm for [ENSG00000279222.1]
WARNING, no entry stored in dbm for [ENSG00000260972.1]
WARNING, no entry stored in dbm for [ENSG00000236438.7]
WARNING, no entry stored in dbm for [ENSG00000236438.7]
WARNING, no entry stored in dbm for [ENSG00000287507.1]
WARNING, no entry stored in dbm for [ENSG00000234709.2]
WARNING, no entry stored in dbm for [ENSG00000177359.20]
WARNING, no entry stored in dbm for [ENSG00000225685.1]
WARNING, no entry stored in dbm for [ENSG00000225685.1]
WARNING, no entry stored in dbm for [ENSG00000250320.6]
WARNING, no entry stored in dbm for [ENSG00000243122.1]
WARNING, no entry stored in dbm for [ENSG00000214826.5]
WARNING, no entry stored in dbm for [ENSG00000224032.7]
WARNING, no entry stored in dbm for [ENSG00000262873.2]
WARNING, no entry stored in dbm for [ENSG00000230424.1]
WARNING, no entry stored in dbm for [ENSG00000229018.5]
WARNING, no entry stored in dbm for [ENSG00000246430.7]
WARNING, no entry stored in dbm for [ENSG00000234678.2]
WARNING, no entry stored in dbm for [ENSG00000280434.1]
WARNING, no entry stored in dbm for [ENSG00000257511.1]
WARNING, no entry stored in dbm for [ENSG00000229132.2]
WARNING, no entry stored in dbm for [ENSG00000229132.2]
WARNING, no entry stored in dbm for [ENSG00000267058.1]
WARNING, no entry stored in dbm for [ENSG00000230239.1]
WARNING, no entry stored in dbm for [ENSG00000285744.1]
WARNING, no entry stored in dbm for [ENSG00000243365.3]
WARNING, no entry stored in dbm for [ENSG00000249456.1]
WARNING, no entry stored in dbm for [ENSG00000235338.1]
WARNING, no entry stored in dbm for [ENSG00000285533.2]
WARNING, no entry stored in dbm for [ENSG00000182397.14]
WARNING, no entry stored in dbm for [ENSG00000275431.1]
WARNING, no entry stored in dbm for [ENSG00000231607.13]
WARNING, no entry stored in dbm for [ENSG00000232354.8]
WARNING, no entry stored in dbm for [ENSG00000185485.14]
WARNING, no entry stored in dbm for [ENSG00000184068.2]
WARNING, no entry stored in dbm for [ENSG00000254765.1]
WARNING, no entry stored in dbm for [ENSG00000237737.6]
WARNING, no entry stored in dbm for [ENSG00000251022.6]
WARNING, no entry stored in dbm for [ENSG00000235244.4]
WARNING, no entry stored in dbm for [ENSG00000235244.4]
WARNING, no entry stored in dbm for [ENSG00000286438.1]
WARNING, no entry stored in dbm for [ENSG00000254363.6]
WARNING, no entry stored in dbm for [ENSG00000257056.3]
WARNING, no entry stored in dbm for [ENSG00000260005.6]
WARNING, no entry stored in dbm for [ENSG00000230630.5]
WARNING, no entry stored in dbm for [ENSG00000287210.1]
WARNING, no entry stored in dbm for [ENSG00000235499.1]
WARNING, no entry stored in dbm for [ENSG00000196756.13]
WARNING, no entry stored in dbm for [ENSG00000248878.1]
WARNING, no entry stored in dbm for [ENSG00000182351.7]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000279208.1]
WARNING, no entry stored in dbm for [ENSG00000278931.1]
WARNING, no entry stored in dbm for [ENSG00000099251.14]
WARNING, no entry stored in dbm for [ENSG00000235154.1]
WARNING, no entry stored in dbm for [ENSG00000255284.2]
WARNING, no entry stored in dbm for [ENSG00000283541.1]
WARNING, no entry stored in dbm for [ENSG00000260896.6]
WARNING, no entry stored in dbm for [ENSG00000131797.12]
WARNING, no entry stored in dbm for [ENSG00000267506.5]
WARNING, no entry stored in dbm for [ENSG00000269904.2]
WARNING, no entry stored in dbm for [ENSG00000279417.1]
WARNING, no entry stored in dbm for [ENSG00000270641.1]
WARNING, no entry stored in dbm for [ENSG00000214988.4]
WARNING, no entry stored in dbm for [ENSG00000223490.2]
WARNING, no entry stored in dbm for [ENSG00000279175.1]
WARNING, no entry stored in dbm for [ENSG00000213742.7]
WARNING, no entry stored in dbm for [ENSG00000230510.7]
WARNING, no entry stored in dbm for [ENSG00000230533.4]
WARNING, no entry stored in dbm for [ENSG00000286277.1]
WARNING, no entry stored in dbm for [ENSG00000224397.7]
WARNING, no entry stored in dbm for [ENSG00000185710.9]
WARNING, no entry stored in dbm for [ENSG00000236162.1]
WARNING, no entry stored in dbm for [ENSG00000215790.8]
WARNING, no entry stored in dbm for [ENSG00000196796.5]
WARNING, no entry stored in dbm for [ENSG00000204352.4]
WARNING, no entry stored in dbm for [ENSG00000225329.3]
WARNING, no entry stored in dbm for [ENSG00000228775.8]
WARNING, no entry stored in dbm for [ENSG00000128254.16]
WARNING, no entry stored in dbm for [ENSG00000167747.15]
WARNING, no entry stored in dbm for [ENSG00000167747.15]
WARNING, no entry stored in dbm for [ENSG00000267062.1]
WARNING, no entry stored in dbm for [ENSG00000226066.1]
WARNING, no entry stored in dbm for [ENSG00000214765.8]
WARNING, no entry stored in dbm for [ENSG00000220771.2]
WARNING, no entry stored in dbm for [ENSG00000237238.3]
WARNING, no entry stored in dbm for [ENSG00000237238.3]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000282851.2]
WARNING, no entry stored in dbm for [ENSG00000237949.2]
WARNING, no entry stored in dbm for [ENSG00000250492.1]
WARNING, no entry stored in dbm for [ENSG00000279022.1]
WARNING, no entry stored in dbm for [ENSG00000267376.1]
WARNING, no entry stored in dbm for [ENSG00000203865.11]
WARNING, no entry stored in dbm for [ENSG00000272030.1]
WARNING, no entry stored in dbm for [ENSG00000267080.6]
WARNING, no entry stored in dbm for [ENSG00000281357.3]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000243069.8]
WARNING, no entry stored in dbm for [ENSG00000227038.3]
WARNING, no entry stored in dbm for [ENSG00000286349.1]
WARNING, no entry stored in dbm for [ENSG00000256591.5]
WARNING, no entry stored in dbm for [ENSG00000254731.1]
WARNING, no entry stored in dbm for [ENSG00000254935.1]
WARNING, no entry stored in dbm for [ENSG00000254682.1]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000267108.1]
WARNING, no entry stored in dbm for [ENSG00000264339.1]
WARNING, no entry stored in dbm for [ENSG00000284625.1]
WARNING, no entry stored in dbm for [ENSG00000247416.4]
WARNING, no entry stored in dbm for [ENSG00000246889.2]
WARNING, no entry stored in dbm for [ENSG00000255291.2]
WARNING, no entry stored in dbm for [ENSG00000269737.2]
WARNING, no entry stored in dbm for [ENSG00000230021.10]
WARNING, no entry stored in dbm for [ENSG00000170161.7]
WARNING, no entry stored in dbm for [ENSG00000231212.1]
WARNING, no entry stored in dbm for [ENSG00000240291.1]
WARNING, no entry stored in dbm for [ENSG00000234117.2]
WARNING, no entry stored in dbm for [ENSG00000287811.1]
WARNING, no entry stored in dbm for [ENSG00000219951.4]
WARNING, no entry stored in dbm for [ENSG00000273481.1]
WARNING, no entry stored in dbm for [ENSG00000231416.1]
WARNING, no entry stored in dbm for [ENSG00000270066.3]
WARNING, no entry stored in dbm for [ENSG00000226149.6]
WARNING, no entry stored in dbm for [ENSG00000258760.1]
WARNING, no entry stored in dbm for [ENSG00000276502.1]
WARNING, no entry stored in dbm for [ENSG00000272906.1]
WARNING, no entry stored in dbm for [ENSG00000228430.9]
WARNING, no entry stored in dbm for [ENSG00000236717.2]
WARNING, no entry stored in dbm for [ENSG00000259133.5]
WARNING, no entry stored in dbm for [ENSG00000226706.1]
WARNING, no entry stored in dbm for [ENSG00000228830.1]
WARNING, no entry stored in dbm for [ENSG00000285269.2]
WARNING, no entry stored in dbm for [ENSG00000285584.2]
WARNING, no entry stored in dbm for [ENSG00000226721.2]
WARNING, no entry stored in dbm for [ENSG00000270589.1]
WARNING, no entry stored in dbm for [ENSG00000288526.1]
WARNING, no entry stored in dbm for [ENSG00000274691.1]
WARNING, no entry stored in dbm for [ENSG00000283573.1]
WARNING, no entry stored in dbm for [ENSG00000286924.1]
WARNING, no entry stored in dbm for [ENSG00000230615.7]
WARNING, no entry stored in dbm for [ENSG00000216359.1]
WARNING, no entry stored in dbm for [ENSG00000233379.2]
WARNING, no entry stored in dbm for [ENSG00000276805.2]
WARNING, no entry stored in dbm for [ENSG00000282572.2]
WARNING, no entry stored in dbm for [ENSG00000240023.1]
WARNING, no entry stored in dbm for [ENSG00000226578.1]
WARNING, no entry stored in dbm for [ENSG00000226578.1]
WARNING, no entry stored in dbm for [ENSG00000229976.2]
WARNING, no entry stored in dbm for [ENSG00000224543.4]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000274760.1]
WARNING, no entry stored in dbm for [ENSG00000274760.1]
WARNING, no entry stored in dbm for [ENSG00000274760.1]
WARNING, no entry stored in dbm for [ENSG00000274760.1]
WARNING, no entry stored in dbm for [ENSG00000274760.1]
WARNING, no entry stored in dbm for [ENSG00000285875.1]
WARNING, no entry stored in dbm for [ENSG00000288543.1]
WARNING, no entry stored in dbm for [ENSG00000276150.1]
WARNING, no entry stored in dbm for [ENSG00000227775.3]
WARNING, no entry stored in dbm for [ENSG00000278987.1]
WARNING, no entry stored in dbm for [ENSG00000230912.1]
WARNING, no entry stored in dbm for [ENSG00000229700.1]
WARNING, no entry stored in dbm for [ENSG00000236039.3]
WARNING, no entry stored in dbm for [ENSG00000233407.1]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000259848.9]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000259848.9]
WARNING, no entry stored in dbm for [ENSG00000271743.1]
WARNING, no entry stored in dbm for [ENSG00000224292.1]
WARNING, no entry stored in dbm for [ENSG00000272141.1]
WARNING, no entry stored in dbm for [ENSG00000276805.2]
WARNING, no entry stored in dbm for [ENSG00000270071.3]
WARNING, no entry stored in dbm for [ENSG00000280441.3]
WARNING, no entry stored in dbm for [ENSG00000280441.3]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000286912.1]
WARNING, no entry stored in dbm for [ENSG00000260464.1]
WARNING, no entry stored in dbm for [ENSG00000224543.4]
WARNING, no entry stored in dbm for [ENSG00000240919.1]
WARNING, no entry stored in dbm for [ENSG00000213237.4]
WARNING, no entry stored in dbm for [ENSG00000285062.1]
WARNING, no entry stored in dbm for [ENSG00000285062.1]
WARNING, no entry stored in dbm for [ENSG00000228833.1]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000274423.1]
WARNING, no entry stored in dbm for [ENSG00000275557.1]
WARNING, no entry stored in dbm for [ENSG00000274423.1]
WARNING, no entry stored in dbm for [ENSG00000277702.1]
WARNING, no entry stored in dbm for [ENSG00000277702.1]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000239969.5]
WARNING, no entry stored in dbm for [ENSG00000261760.8]
WARNING, no entry stored in dbm for [ENSG00000218227.3]
WARNING, no entry stored in dbm for [ENSG00000240424.2]
WARNING, no entry stored in dbm for [ENSG00000285527.1]
WARNING, no entry stored in dbm for [ENSG00000268120.1]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000256712.1]
WARNING, no entry stored in dbm for [ENSG00000265298.1]
WARNING, no entry stored in dbm for [ENSG00000274840.4]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000248994.2]
WARNING, no entry stored in dbm for [ENSG00000287051.1]
WARNING, no entry stored in dbm for [ENSG00000224520.2]
WARNING, no entry stored in dbm for [ENSG00000240518.2]
WARNING, no entry stored in dbm for [ENSG00000213361.2]
WARNING, no entry stored in dbm for [ENSG00000235421.1]
WARNING, no entry stored in dbm for [ENSG00000226002.1]
WARNING, no entry stored in dbm for [ENSG00000249444.2]
WARNING, no entry stored in dbm for [ENSG00000227762.4]
WARNING, no entry stored in dbm for [ENSG00000250410.1]
WARNING, no entry stored in dbm for [ENSG00000218416.4]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000244513.7]
WARNING, no entry stored in dbm for [ENSG00000235902.1]
WARNING, no entry stored in dbm for [ENSG00000285663.1]
WARNING, no entry stored in dbm for [ENSG00000282904.2]
WARNING, no entry stored in dbm for [ENSG00000223711.1]
WARNING, no entry stored in dbm for [ENSG00000170089.15]
WARNING, no entry stored in dbm for [ENSG00000243150.6]
WARNING, no entry stored in dbm for [ENSG00000228008.1]
WARNING, no entry stored in dbm for [ENSG00000267257.1]
WARNING, no entry stored in dbm for [ENSG00000224543.4]
WARNING, no entry stored in dbm for [ENSG00000253144.1]
WARNING, no entry stored in dbm for [ENSG00000273230.1]
WARNING, no entry stored in dbm for [ENSG00000251378.1]
WARNING, no entry stored in dbm for [ENSG00000228303.1]
WARNING, no entry stored in dbm for [ENSG00000287985.1]
WARNING, no entry stored in dbm for [ENSG00000233184.7]
WARNING, no entry stored in dbm for [ENSG00000243176.6]
WARNING, no entry stored in dbm for [ENSG00000284624.1]
WARNING, no entry stored in dbm for [ENSG00000225605.3]
WARNING, no entry stored in dbm for [ENSG00000225605.3]
WARNING, no entry stored in dbm for [ENSG00000225605.3]
WARNING, no entry stored in dbm for [ENSG00000239268.3]
WARNING, no entry stored in dbm for [ENSG00000239268.3]
WARNING, no entry stored in dbm for [ENSG00000287174.1]
WARNING, no entry stored in dbm for [ENSG00000284428.1]
WARNING, no entry stored in dbm for [ENSG00000262136.1]
WARNING, no entry stored in dbm for [ENSG00000269001.2]
WARNING, no entry stored in dbm for [ENSG00000288620.1]
WARNING, no entry stored in dbm for [ENSG00000288620.1]
WARNING, no entry stored in dbm for [ENSG00000187953.10]
WARNING, no entry stored in dbm for [ENSG00000248126.1]
WARNING, no entry stored in dbm for [ENSG00000284783.1]
WARNING, no entry stored in dbm for [ENSG00000285035.1]
WARNING, no entry stored in dbm for [ENSG00000265936.1]
WARNING, no entry stored in dbm for [ENSG00000214259.3]
WARNING, no entry stored in dbm for [ENSG00000265943.1]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000250869.2]
WARNING, no entry stored in dbm for [ENSG00000284717.1]
WARNING, no entry stored in dbm for [ENSG00000257415.1]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000233673.7]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000266931.2]
WARNING, no entry stored in dbm for [ENSG00000287232.1]
WARNING, no entry stored in dbm for [ENSG00000272368.2]
WARNING, no entry stored in dbm for [ENSG00000284636.1]
WARNING, no entry stored in dbm for [ENSG00000252651.1]
WARNING, no entry stored in dbm for [ENSG00000217702.3]
WARNING, no entry stored in dbm for [ENSG00000271855.1]
WARNING, no entry stored in dbm for [ENSG00000189229.11]
WARNING, no entry stored in dbm for [ENSG00000256569.1]
WARNING, no entry stored in dbm for [ENSG00000287388.1]
WARNING, no entry stored in dbm for [ENSG00000283674.3]
WARNING, no entry stored in dbm for [ENSG00000283483.1]
WARNING, no entry stored in dbm for [ENSG00000287875.1]
WARNING, no entry stored in dbm for [ENSG00000254859.1]
WARNING, no entry stored in dbm for [ENSG00000267895.1]
WARNING, no entry stored in dbm for [ENSG00000255357.2]
WARNING, no entry stored in dbm for [ENSG00000261650.1]
WARNING, no entry stored in dbm for [ENSG00000229212.8]
WARNING, no entry stored in dbm for [ENSG00000189136.9]
WARNING, no entry stored in dbm for [ENSG00000229212.8]
WARNING, no entry stored in dbm for [ENSG00000257884.2]
WARNING, no entry stored in dbm for [ENSG00000262903.1]
WARNING, no entry stored in dbm for [ENSG00000275088.1]
WARNING, no entry stored in dbm for [ENSG00000263301.1]
WARNING, no entry stored in dbm for [ENSG00000248569.1]
WARNING, no entry stored in dbm for [ENSG00000250280.2]
WARNING, no entry stored in dbm for [ENSG00000260413.1]
WARNING, no entry stored in dbm for [ENSG00000267277.1]
WARNING, no entry stored in dbm for [ENSG00000241204.1]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000242338.6]
WARNING, no entry stored in dbm for [ENSG00000272800.3]
WARNING, no entry stored in dbm for [ENSG00000259407.1]
WARNING, no entry stored in dbm for [ENSG00000259407.1]
WARNING, no entry stored in dbm for [ENSG00000240418.1]
WARNING, no entry stored in dbm for [ENSG00000234584.1]
WARNING, no entry stored in dbm for [ENSG00000266573.6]
WARNING, no entry stored in dbm for [ENSG00000212978.6]
WARNING, no entry stored in dbm for [ENSG00000224739.2]
WARNING, no entry stored in dbm for [ENSG00000259495.3]
WARNING, no entry stored in dbm for [ENSG00000261329.6]
WARNING, no entry stored in dbm for [ENSG00000282393.1]
WARNING, no entry stored in dbm for [ENSG00000286283.1]
WARNING, no entry stored in dbm for [ENSG00000270964.1]
WARNING, no entry stored in dbm for [ENSG00000288604.1]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000236478.2]
WARNING, no entry stored in dbm for [ENSG00000261777.6]
WARNING, no entry stored in dbm for [ENSG00000257890.1]
WARNING, no entry stored in dbm for [ENSG00000257890.1]
WARNING, no entry stored in dbm for [ENSG00000270087.5]
WARNING, no entry stored in dbm for [ENSG00000286489.1]
WARNING, no entry stored in dbm for [ENSG00000270804.1]
WARNING, no entry stored in dbm for [ENSG00000257696.1]
WARNING, no entry stored in dbm for [ENSG00000282890.1]
WARNING, no entry stored in dbm for [ENSG00000225963.8]
WARNING, no entry stored in dbm for [ENSG00000111788.10]
WARNING, no entry stored in dbm for [ENSG00000111788.10]
WARNING, no entry stored in dbm for [ENSG00000257612.2]
WARNING, no entry stored in dbm for [ENSG00000279160.1]
WARNING, no entry stored in dbm for [ENSG00000257303.2]
WARNING, no entry stored in dbm for [ENSG00000260905.1]
WARNING, no entry stored in dbm for [ENSG00000286828.1]
WARNING, no entry stored in dbm for [ENSG00000287263.1]
WARNING, no entry stored in dbm for [ENSG00000279232.2]
WARNING, no entry stored in dbm for [ENSG00000267121.6]
WARNING, no entry stored in dbm for [ENSG00000260254.1]
WARNING, no entry stored in dbm for [ENSG00000257261.6]
WARNING, no entry stored in dbm for [ENSG00000226472.8]
WARNING, no entry stored in dbm for [ENSG00000262202.4]
WARNING, no entry stored in dbm for [ENSG00000283258.2]
WARNING, no entry stored in dbm for [ENSG00000286739.1]
WARNING, no entry stored in dbm for [ENSG00000226756.1]
WARNING, no entry stored in dbm for [ENSG00000284294.1]
WARNING, no entry stored in dbm for [ENSG00000283003.2]
WARNING, no entry stored in dbm for [ENSG00000225480.1]
WARNING, no entry stored in dbm for [ENSG00000272693.4]
WARNING, no entry stored in dbm for [ENSG00000269968.1]
WARNING, no entry stored in dbm for [ENSG00000287712.1]
WARNING, no entry stored in dbm for [ENSG00000256433.3]
WARNING, no entry stored in dbm for [ENSG00000223544.1]
WARNING, no entry stored in dbm for [ENSG00000267436.1]
WARNING, no entry stored in dbm for [ENSG00000262898.3]
WARNING, no entry stored in dbm for [ENSG00000266933.2]
WARNING, no entry stored in dbm for [ENSG00000263159.1]
WARNING, no entry stored in dbm for [ENSG00000214719.13]
WARNING, no entry stored in dbm for [ENSG00000264990.1]
WARNING, no entry stored in dbm for [ENSG00000234450.1]
WARNING, no entry stored in dbm for [ENSG00000255513.1]
WARNING, no entry stored in dbm for [ENSG00000243004.6]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000254610.3]
WARNING, no entry stored in dbm for [ENSG00000273819.1]
WARNING, no entry stored in dbm for [ENSG00000257433.6]
WARNING, no entry stored in dbm for [ENSG00000229533.1]
WARNING, no entry stored in dbm for [ENSG00000235560.4]
WARNING, no entry stored in dbm for [ENSG00000231749.3]
WARNING, no entry stored in dbm for [ENSG00000231749.3]
WARNING, no entry stored in dbm for [ENSG00000251595.7]
WARNING, no entry stored in dbm for [ENSG00000259429.5]
WARNING, no entry stored in dbm for [ENSG00000259570.1]


	* STAR-Fusion complete.  See output: /tmp/nxf.1ZS8k1DfQp/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)