.command.log - Workdir - NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (FFPE_HD789_01_RNA_13_A23MVY2LT4_1)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/74/35c6530df1e700f02c884d1004df9c/.command.log
Size: 716 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (FFPE_HD789_01_RNA_13_A23MVY2LT4_1)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/52/33a56d29b4780ca17eeb0cbe6e04fd/FFPE_HD789_01_RNA_13_A23MVY2LT4_1.md.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/74/35c6530df1e700f02c884d1004df9c/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/74/35c6530df1e700f02c884d1004df9c/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/52/33a56d29b4780ca17eeb0cbe6e04fd/FFPE_HD789_01_RNA_13_A23MVY2LT4_1.md.bam
==> STAGING COMPLETE (4 inputs)

+ seqtool saturation -region chr20 FFPE_HD789_01_RNA_13_A23MVY2LT4_1.md.bam
[W::hts_idx_load3] The index file is older than the data file: FFPE_HD789_01_RNA_13_A23MVY2LT4_1.md.bai