NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (659_cAd-T1-TRNA-1_A23MVY2LT4_2) - dev_rna_exp0014_exp0015-73d51683 - Workflow Tracker

Runs
dev_rna_exp0..15-73d51683
Tasks
GATK4_MARKDUPLICATES (659_cAd-T1-TRNA-1_A23MVY2LT4_2)

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Task Info

Status: succeeded
Hash: 3a56ece12f89
Process: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES
Tag: 659_cAd-T1-TRNA-1_A23MVY2LT4_2
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 48/9dece5
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/48/9dece5d2c691c753d498b51c9ca630
Native ID: nf-489dece5d2c691c753d498b51c9ca630-39630

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.5 / 2
Memory (peak / alloc): 101.3 GB / 148.0 GB
Process I/O (rchar / wchar): 54.5 GB / 36.8 GB
Disk I/O (read / write): - / 36.8 GB
Host: i-0e5c3b0c39f1b040b ( on-demand)

Runtime

Submitted: Jun 08, 2026 2:25:38 AM
Completed: Jun 08, 2026 3:16:32 AM
Total Duration: 50m 53s

Phases

Queue: 19s
Execution: 47m 26s
Stage/Unstage: 3m 8s

Attempt 1

Execution

Status: failed
Hash: 4a/7e2bb9
Failure Reason: BackoffLimitExceeded ()
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4a/7e2bb9c6bb4606cfcfafabb5511d6c
Native ID: nf-4a7e2bb9c6bb4606cfcfafabb5511d6c-577d9

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 74.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0eda3fc4bd166b2f2 ( spot)

Runtime

Submitted: Jun 08, 2026 1:39:38 AM
Completed: Jun 08, 2026 2:25:38 AM
Total Duration: 45m 59s

Phases

Queue: 45m 59s
Execution: -
Stage/Unstage: -