Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/22/8f9bf3b1147a15ed9a3cb863bfd3e3/659_eHw-T1-TRNA-1_A23MVY2LT4_2.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/83/23096d95d2a4158938e4b55e8011c4/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/83/23096d95d2a4158938e4b55e8011c4/.command.run
==> STAGING COMPLETE (3 inputs)

PAIRED_END_BAM_INPUT
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Processed 588000000 records
paired = 291059516
unpaired = 6361340
MERGED PAIRED END READS = 291059516
MATES PROCESSED = 588480372
TOTAL READS     = 297420856
DISTINCT READS  = 6.64582e+07
DISTINCT COUNTS = 2245
MAX COUNT       = 1500200
COUNTS OF 1     = 1.82233e+07
MAX TERMS       = 100
OBSERVED COUNTS (1500201)
1	18223300
2	12291894
3	9395069
4	7020336
5	5125989
6	3681509
7	2626814
8	1873604
9	1345542
10	977962
11	720907
12	539204
13	413598
14	319900
15	253363
16	203225
17	164666
18	136543
19	112411
20	94444
21	80753
22	68664
23	59224
24	51913
25	45082
26	39633
27	35333
28	32061
29	28091
30	25496
31	23242
32	21071
33	19020
34	17830
35	16293
36	15276
37	14276
38	12993
39	12439
40	11483
41	10679
42	10013
43	9524
44	8936
45	8547
46	7912
47	7542
48	7014
49	6724
50	6418
51	6156
52	5790
53	5468
54	5262
55	4937
56	4745
57	4532
58	4410
59	4179
60	4072
61	3941
62	3775
63	3555
64	3451
65	3278
66	3168
67	3117
68	3002
69	2870
70	2876
71	2651
72	2644
73	2590
74	2426
75	2441
76	2304
77	2231
78	2172
79	2028
80	2055
81	2001
82	1993
83	1930
84	1799
85	1794
86	1734
87	1675
88	1604
89	1502
90	1555
91	1469
92	1444
93	1471
94	1327
95	1364
96	1309
97	1287
98	1269
99	1233
100	1151
101	1109
102	1144
103	1124
104	1089
105	1047
106	1056
107	1034
108	998
109	946
110	1006
111	966
112	895
113	909
114	917
115	837
116	832
117	865
118	865
119	794
120	835
121	756
122	755
123	756
124	739
125	698
126	687
127	710
128	662
129	701
130	630
131	645
132	672
133	615
134	615
135	626
136	598
137	579
138	600
139	542
140	574
141	546
142	583
143	535
144	527
145	552
146	513
147	530
148	478
149	502
150	435
151	480
152	455
153	432
154	448
155	428
156	466
157	445
158	401
159	407
160	390
161	411
162	383
163	379
164	358
165	366
166	385
167	378
168	334
169	393
170	338
171	332
172	349
173	357
174	326
175	333
176	315
177	339
178	345
179	340
180	300
181	291
182	278
183	296
184	305
185	281
186	298
187	265
188	270
189	269
190	300
191	283
192	297
193	282
194	245
195	287
196	224
197	252
198	241
199	257
200	248
201	261
202	237
203	225
204	235
205	230
206	224
207	261
208	231
209	214
210	226
211	226
212	176
213	212
214	191
215	193
216	204
217	207
218	184
219	208
220	204
221	231
222	174
223	196
224	191
225	167
226	200
227	151
228	183
229	185
230	178
231	169
232	166
233	169
234	163
235	158
236	176
237	175
238	131
239	149
240	149
241	169
242	164
243	152
244	142
245	152
246	138
247	158
248	153
249	149
250	133
251	124
252	156
253	138
254	142
255	130
256	131
257	134
258	135
259	143
260	132
261	129
262	132
263	144
264	128
265	143
266	123
267	120
268	149
269	112
270	103
271	125
272	115
273	112
274	123
275	103
276	97
277	112
278	114
279	110
280	110
281	110
282	107
283	115
284	108
285	105
286	115
287	109
288	98
289	102
290	101
291	104
292	95
293	83
294	93
295	79
296	89
297	93
298	102
299	103
300	83
301	102
302	96
303	95
304	84
305	104
306	88
307	78
308	98
309	73
310	79
311	103
312	89
313	80
314	100
315	87
316	78
317	95
318	89
319	83
320	82
321	80
322	85
323	78
324	80
325	76
326	80
327	71
328	89
329	85
330	72
331	65
332	66
333	76
334	74
335	80
336	74
337	78
338	78
339	65
340	52
341	65
342	72
343	67
344	67
345	58
346	69
347	65
348	57
349	77
350	65
351	76
352	53
353	56
354	66
355	53
356	59
357	67
358	49
359	56
360	50
361	62
362	60
363	82
364	53
365	68
366	65
367	69
368	44
369	57
370	64
371	61
372	52
373	55
374	50
375	39
376	56
377	52
378	46
379	50
380	53
381	48
382	30
383	45
384	35
385	40
386	57
387	46
388	51
389	48
390	39
391	34
392	47
393	56
394	51
395	69
396	50
397	53
398	49
399	43
400	45
401	49
402	34
403	51
404	54
405	39
406	44
407	41
408	43
409	42
410	39
411	45
412	48
413	48
414	32
415	35
416	39
417	45
418	32
419	40
420	42
421	36
422	36
423	35
424	41
425	37
426	38
427	32
428	34
429	31
430	38
431	31
432	40
433	35
434	33
435	35
436	43
437	37
438	48
439	34
440	46
441	38
442	39
443	39
444	36
445	33
446	30
447	39
448	41
449	29
450	28
451	37
452	31
453	24
454	35
455	32
456	35
457	32
458	28
459	24
460	27
461	31
462	33
463	37
464	22
465	22
466	27
467	29
468	33
469	33
470	31
471	29
472	31
473	32
474	26
475	26
476	28
477	36
478	25
479	32
480	32
481	24
482	27
483	21
484	30
485	33
486	27
487	31
488	28
489	31
490	19
491	21
492	36
493	37
494	23
495	19
496	28
497	24
498	30
499	36
500	29
501	21
502	24
503	27
504	28
505	27
506	29
507	32
508	22
509	24
510	27
511	31
512	28
513	23
514	23
515	25
516	33
517	22
518	33
519	21
520	19
521	21
522	18
523	17
524	28
525	22
526	20
527	20
528	22
529	27
530	27
531	30
532	32
533	19
534	20
535	24
536	24
537	17
538	27
539	19
540	24
541	18
542	24
543	18
544	15
545	25
546	33
547	12
548	17
549	26
550	21
551	29
552	23
553	21
554	28
555	15
556	21
557	20
558	17
559	18
560	26
561	17
562	22
563	12
564	22
565	26
566	22
567	12
568	19
569	19
570	22
571	37
572	20
573	22
574	22
575	17
576	18
577	18
578	12
579	21
580	17
581	12
582	16
583	25
584	11
585	20
586	12
587	11
588	15
589	15
590	25
591	21
592	14
593	20
594	18
595	17
596	20
597	15
598	16
599	13
600	20
601	18
602	20
603	15
604	23
605	20
606	25
607	17
608	19
609	18
610	10
611	9
612	14
613	16
614	18
615	19
616	17
617	17
618	8
619	14
620	15
621	10
622	16
623	11
624	19
625	18
626	11
627	11
628	15
629	13
630	15
631	16
632	20
633	16
634	14
635	21
636	17
637	7
638	13
639	15
640	21
641	14
642	10
643	17
644	12
645	12
646	20
647	11
648	16
649	15
650	18
651	5
652	7
653	17
654	10
655	9
656	13
657	15
658	12
659	18
660	15
661	14
662	12
663	16
664	14
665	15
666	10
667	11
668	13
669	14
670	12
671	11
672	11
673	15
674	15
675	13
676	16
677	12
678	21
679	14
680	14
681	12
682	14
683	15
684	12
685	11
686	13
687	7
688	12
689	9
690	13
691	11
692	12
693	12
694	12
695	6
696	18
697	14
698	14
699	8
700	12
701	9
702	19
703	18
704	10
705	10
706	8
707	8
708	7
709	8
710	5
711	11
712	6
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720	10
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722	16
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740	7
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744	8
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751	7
752	10
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754	7
755	10
756	8
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763	7
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765	13
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767	11
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770	6
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790	9
791	9
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793	7
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800	11
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810	9
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812	10
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830	8
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832	7
833	7
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846	10
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855	9
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864	4
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877	8
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950	4
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954	11
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963	8
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967	6
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978	6
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980	4
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987	3
988	8
989	4
990	5
991	8
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994	6
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999	5
1000	6
1001	7
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1016	5
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1101	2
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1200	4
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1911	2
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1918	1
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1920	1
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1930	1
1934	1
1935	2
1943	1
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1947	1
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1955	1
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1963	1
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1973	2
1976	1
1980	1
1981	1
1983	1
1984	1
1985	1
1988	1
1990	1
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1994	1
1995	2
2000	1
2001	1
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2008	1
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2010	1
2013	1
2014	4
2016	2
2020	1
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3932	1
3943	1
3952	1
3959	1
3979	1
4016	1
4020	1
4060	1
4073	1
4074	1
4078	1
4090	1
4108	1
4111	1
4130	1
4136	1
4142	1
4151	1
4161	1
4164	1
4165	1
4179	1
4182	1
4185	1
4195	1
4200	1
4215	1
4217	1
4224	2
4262	1
4263	1
4266	1
4296	1
4310	1
4330	1
4344	1
4392	1
4401	2
4425	1
4428	1
4438	1
4441	1
4477	1
4479	1
4489	1
4513	1
4534	1
4542	1
4546	1
4635	1
4657	1
4701	1
4831	1
4832	1
4855	1
4886	1
4920	1
4938	1
5018	1
5040	1
5043	1
5055	1
5082	1
5140	1
5168	1
5185	1
5207	1
5225	1
5290	1
5326	1
5388	1
5392	1
5435	1
5451	1
5456	1
5463	1
5495	1
5523	1
5555	1
5642	1
5648	1
5656	1
5673	1
5707	1
5711	1
5924	1
6001	1
6031	1
6054	1
6177	1
6342	1
6783	1
6854	1
6896	1
6930	1
6938	1
7046	1
7244	1
7251	1
7289	1
7311	1
7380	1
7534	1
7561	1
7596	1
7609	1
7678	1
7724	1
8011	1
8201	1
8656	1
9018	1
9058	1
9190	1
9361	1
9419	1
9622	1
9883	1
9917	1
10985	1
11025	1
13042	1
13660	1
13737	1
15671	1
17309	1
19224	1
20142	1
25525	1
74803	1
1500200	1

[ESTIMATING YIELD CURVE]
[BOOTSTRAPPING HISTOGRAM]
..........._................................_...........................
..............................
[COMPUTING CONFIDENCE INTERVALS]
[WRITING OUTPUT]