Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/91/87f6b4b5783fb64447585dc9d95813/659_cfy-T1-TRNA-1_A23MVY2LT4_1_R2.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ab/d39fc0ba1e82112f25b269e94f2efd/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ab/d39fc0ba1e82112f25b269e94f2efd/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/91/87f6b4b5783fb64447585dc9d95813/659_cfy-T1-TRNA-1_A23MVY2LT4_1_R1.fastq.gz
==> STAGING COMPLETE (4 inputs)

ls: *.fail.fastq.gz: No such file or directory
ls: *.merged.fastq.gz: No such file or directory