File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/41/65bcc9130a45149d881725c3454b23/.command.log
Size
1.0 KB
Attempt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9f/e34e08e2a47331d8c5d8ba5c5c570b/659_bNS-T1-TRNA-1_A23MVY2LT4_2.sample_qc.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/95/0014c0f04db607055d3d1a74ebdf7c/659_bNS-T1-TRNA-1_A23MVY2LT4_2
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/41/65bcc9130a45149d881725c3454b23/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/41/65bcc9130a45149d881725c3454b23/.command.run
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: 659_bNS-T1-TRNA-1_A23MVY2LT4_2/abundance.h5
Successfully converted 659_bNS-T1-TRNA-1_A23MVY2LT4_2/abundance.h5 to 659_bNS-T1-TRNA-1_A23MVY2LT4_2_kallisto_mqc.tsv
  Sample: 659_bNS-T1-TRNA-1_A23MVY2LT4_2
  Mean Fragment Length: 160.5 bp
  Median Fragment Length: 147.0 bp
  pct_mito_est_counts: 0.009%
  pct_ribo_est_counts: 1.38%
  pct_hk_est_counts: 0.561%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.019%
  pct_ribo_tpm: 4.204%
  pct_hk_tpm: 0.836%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 5.999%