AIH curated blacklist: matched 9 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 200
Pass (FILTER=PASS): 24 (12.0%)
Fail (FILTER=FAIL): 176 (88.0%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 9
All 9 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 57
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 30
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 17
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 15
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 8
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 8
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 5
confidence_below_min(low<high): 5
total_reads_below_min(5.0<8.0): 4
confidence_below_min(medium<high);aih_curated_blacklist: 4
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 2
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 2
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 2
Breakdown by confidence:
high: 24 pass, 7 fail (total: 31)
low: 0 pass, 77 fail (total: 77)
medium: 0 pass, 92 fail (total: 92)
Arriba filter: 200 rows -> 24 PASS; wrote 659_bTo-T1-TRNA-1_A23MVY2LT4_2.arriba.fusions.filtered.tsv and 659_bTo-T1-TRNA-1_A23MVY2LT4_2.arriba.fusions.filtered_pass_only.tsv
Summary written to: 659_bTo-T1-TRNA-1_A23MVY2LT4_2.arriba.fusions.filter_summary.txt